Contig 001177:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF041A02-                                                        ACAACTCACCAAAGA
                      ____________________________________________________________
consensus                                                          ACAACTCACCAAAGA
 
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JMFF041A02-           AACCAAAAAACAAAAGTTGTTAAACCTTCATCACATCACCTAGACCAATACCACCATGGC
                      ____________________________________________________________
consensus             AACCAAAAAACAAAAGTTGTTAAACCTTCATCACATCACCTAGACCAATACCACCATGGC
 
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JMFF041A02-           AGGTTATGGCTTCACGAACAGAGGAAACTTTAACACCTACAAGGCCATGGAGCGACACAT
rJMFF041A02+                                                   AGGCCATGGAGCGACACAT
                      ____________________________________________________________
consensus             AGGTTATGGCTTCACGAACAGAGGAAACTTTAACACCTACAAGGCCATGGAGCGACACAT
 
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JMFF041A02-           GGCCGGAAACTCCATCAGCGGCGGCGCTCACCGTCCGTCGTCGTACGCTCATCACGGCTA
rJMFF041A02+          GGCCGGAAACTCCATCAGCGGCGGCGCTCACCGTCCGTCGTCGTACGCTCATCACGGCTA
                      ____________________________________________________________
consensus             GGCCGGAAACTCCATCAGCGGCGGCGCTCACCGTCCGTCGTCGTACGCTCATCACGGCTA
 
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JMFF041A02-           TCCCGCCGCCGGTGAAAGCTTCTTAAGCATGAAGGACAACGTGGTCGCCGGCGGCGAACA
rJMFF041A02+          TCCCGCCGCCGGTGAAAGCTTCTTAAGCATGAAGGACAACGTGGTCGCCGGCGGCGAACA
                      ____________________________________________________________
consensus             TCCCGCCGCCGGTGAAAGCTTCTTAAGCATGAAGGACAACGTGGTCGCCGGCGGCGAACA
 
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JMFF041A02-           CCCCAGCAGCAGCAACAACAGTGTTGAACAAGACTTGTTCGAGAAGGTTCGCATGCAAAT
rJMFF041A02+          CCCCAGCAGCAGCAACAACAGTGTTGAACAAGACTTGTTCGAGAAGGTTCGCATGCAAAT
                      ____________________________________________________________
consensus             CCCCAGCAGCAGCAACAACAGTGTTGAACAAGACTTGTTCGAGAAGGTTCGCATGCAAAT
 
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JMFF041A02-           GTCCCAACTGAATTACCGTCGCAGGAACGGGTGGGTAAAGCCTTCCACTGGGAAGAATAA
rJMFF041A02+          GTCCCAACTGAATTACCGTCGCAGGAACGGGTGGGTAAAGCCTTCCACTGGGAAGAATAA
                      ____________________________________________________________
consensus             GTCCCAACTGAATTACCGTCGCAGGAACGGGTGGGTAAAGCCTTCCACTGGGAAGAATAA
 
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JMFF041A02-           TAATAATGGAGAATATGATCACAAGCCTAATGGATTGCAAACCGGAAAGTACAACTTCTA
rJMFF041A02+          TAATAATGGAGAATATGATCACAAGCCTAATGGATTGCAAACCGGAAAGTACAACTTCTA
                      ____________________________________________________________
consensus             TAATAATGGAGAATATGATCACAAGCCTAATGGATTGCAAACCGGAAAGTACAACTTCTA
 
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JMFF041A02-           CGCCGCTCAGGGCGGTGCTCAACGCTTCCGTTTTGGTGCTCCGGCGGCCGGCGATGTCTC
rJMFF041A02+          CGCCGCTCAGGGCGGTGCTCAACGCTTCCGTTTTGGTGCTCCGGCGGCCGGCGATGTCTC
                      ____________________________________________________________
consensus             CGCCGCTCAGGGCGGTGCTCAACGCTTCCGTTTTGGTGCTCCGGCGGCCGGCGATGTCTC
 
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JMFF041A02-           AGCAAAGTAGAGAGAATCGTAACTCATAAACTGATTATCTCATATATAAATTAAAGGACT
rJMFF041A02+          AGCAAAGTAGAGAGAATCGTAACTCATAAACTGATTATCTCATATATAAATTAAAGGACT
                      ____________________________________________________________
consensus             AGCAAAGTAGAGAGAATCGTAACTCATAAACTGATTATCTCATATATAAATTAAAGGACT
 
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JMFF041A02-           AAGAAATTAAAGAACTTTATAGTGTTTTTTACCCTATAAATAAGATATTAAGAACTAAAA
rJMFF041A02+          AAGAAATTAAAGAACTTTATAGTGTTTTTTACCTATAAAATAAGATATTAAGAACTAAAA
                      ____________________________________________________________
consensus             AAGAAATTAAAGAACTTTATAGTGTTTTTTACCTTTTAAATAAGATATTAAGAACTAAAA
 
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JMFF041A02-           AGTGGAGATGTGCGACTGCATCCCTCT                                 
rJMFF041A02+          AGTGGAGATGTGCGACTGCATCCCTCTCTTATCCTAGCTAGTATTTTCATTGTATTATAC
                      ____________________________________________________________
consensus             AGTGGAGATGTGCGACTGCATCCCTCTCTTATCCTAGCTAGTATTTTCATTGTATTATAC
 
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rJMFF041A02+          TGTCATTGTATAAGAGATATGTGATGTATATTTAATTATATGAAGTCTTTTAAGTTTTTG
                      ____________________________________________________________
consensus             TGTCATTGTATAAGAGATATGTGATGTATATTTAATTATATGAAGTCTTTTAAGTTTTTG