Contig 001174:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN039H02+                                                        CCAAAGTCATATTTT
rJMFF040H04-                                           AGTTCTATAAAACCAAAGTCATATTTT
                      ____________________________________________________________
consensus                                              AGTTCTATAAAACCAAAGTCATATTTT
 
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JMFN039H02+           CATCATCATGAGAACAAACATTCTTACAACCAAAAACCCAAATTTTTAACACTGAGCTCT
rJMFF040H04-          CATCATCATGAGAACAAACATTCTTACAACCAAAAACCCAAATTTTTAACACTGAGCTCT
                      ____________________________________________________________
consensus             CATCATCATGAGAACAAACATTCTTACAACCAAAAACCCAAATTTTTAACACTGAGCTCT
 
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JMFN039H02+           CTAACCCTAAACCATAGAATTCACATTTTACCTTTCAAACATCTCGAAGAAAGGCGTAGG
rJMFF040H04-          CTAACCCTAAACCATAGAATTCACATTTTACCTTTCAAACATCTCGAAGAAAGGCGTAGG
                      ____________________________________________________________
consensus             CTAACCCTAAACCATAGAATTCACATTTTACCTTTCAAACATCTCGAAGAAAGGCGTAGG
 
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JMFN039H02+           CCTATCCCTTTGAACCATATATCTTCGGCTCCCTCCCTCCCTACCTCAAAGCCTAAACTA
rJMFF040H04-          CCTATCCCTTTGAACCATATATCTTCGGCTCCCTCCCTCCCTACCTCAAAGCCTAAACTA
                      ____________________________________________________________
consensus             CCTATCCCTTTGAACCATATATCTTCGGCTCCCTCCCTCCCTACCTCAAAGCCTAAACTA
 
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JMFN039H02+           GCAAAATATGTACAAGACAATTGAAGCCGTTAAGAAACAAAGACCATAAACCTCTTGTCA
rJMFF040H04-          GCAAAATATGTACAAGACAATTGAAGCCGTTAAGAAACAAAGACCATAAACCTCTTGTCA
                      ____________________________________________________________
consensus             GCAAAATATGTACAAGACAATTGAAGCCGTTAAGAAACAAAGACCATAAACCTCTTGTCA
 
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JMFN039H02+           TATCTTGCCCGAGACTCCCCCCCACTAGCGCATTTATGTGTTTGCCGACTGCGATGGCAC
rJMFF040H04-          TATCTTGCCCGAGACTCCCCCCCACTAGCGCATTTATGTGTTTGCCGACTGCGATGGCAC
                      ____________________________________________________________
consensus             TATCTTGCCCGAGACTCCCCCCCACTAGCGCATTTATGTGTTTGCCGACTGCGATGGCAC
 
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JMFN039H02+           CCTAGGATGGTTATGGTCTCCCTCATAAGTGACAATTAACATTGACGGGTCTTCCAAGCA
rJMFF040H04-          CCTAGGATGGTTATGGTCTCCCTCATAAGTGACAATTAACATTGACGGGTCTTCCAAGCA
                      ____________________________________________________________
consensus             CCTAGGATGGTTATGGTCTCCCTCATAAGTGACAATTAACATTGACGGGTCTTCCAAGCA
 
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JMFN039H02+           TCTCTCCACGTGCTTCCTCGCAGGGCAGCCTCTCATGCTACTACATTTATAGTATCCCCT
rJMFF040H04-          TCTCTCCACGTGCTTCCTCGCAGGGCAGCCTCTCATGCTACTACATTTATAGTATCCCCT
                      ____________________________________________________________
consensus             TCTCTCCACGTGCTTCCTCGCAGGGCAGCCTCTCATGCTACTACATTTATAGTATCCCCT
 
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JMFN039H02+           TGGGTGAGGAGAACCCTTGATTGGCTTCTGCCCGTACTTTCTCCAAGAATATTCGTCTTG
rJMFF040H04-          TGGGTGAGGAGAACCCTTGATTGGCTTCTGCCCGTACTTTCTCCAAGAATATTCGTCTTG
                      ____________________________________________________________
consensus             TGGGTGAGGAGAACCCTTGATTGGCTTCTGCCCGTACTTTCTCCAAGAATATTCGTCTTG
 
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JMFN039H02+           AGGGATATCAGCTAGCTTGTTACTGATAGCGGGAACTTTAATTGACCTTTTCA       
rJMFF040H04-          AGGGATATCAGCTAGCTTGTTACTGATAGCGGGAACTTTAATTGACCTTTTCACCCGATG
                      ____________________________________________________________
consensus             AGGGATATCAGCTAGCTTGTTACTGATAGCGGGAACTTTAATTGACCTTTTCACCCGATG
 
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rJMFF040H04-          TTTCCTCTTCTTGGAGCAGTGGCATCTACTGCTGCTTCCACATTTCGTGCTTCCATCCTC
                      ____________________________________________________________
consensus             TTTCCTCTTCTTGGAGCAGTGGCATCTACTGCTGCTTCCACATTTCGTGCTTCCATCCTC
 
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rJMFF040H04-          TCCCCGTCCAGAACACCTTTTCTTGTGCTGATACGAGCTCAGATCAGCGGAACGAGAGGC
                      ____________________________________________________________
consensus             TCCCCGTCCAGAACACCTTTTCTTGTGCTGATACGAGCTCAGATCAGCGGAACGAGAGGC
 
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rJMFF040H04-          ACCGATTAAATGGAAGGCATTCCCGTCCATATTTGCAACGCTCCCATCAATACTCANAGA
                      ____________________________________________________________
consensus             ACCGATTAAATGGAAGGCATTCCCGTCCATATTTGCAACGCTCCCATCAATACTCANAGA