Contig 001157:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011H08Sequence531013314 (46)ref|XP_006339914.1|1e-25PREDICTED: patatin-05-like [Solanum tuberosum]268001157 (4)
JMFF037C17Sequence600013314 (46)ref|XP_007202991.1|1e-41hypothetical protein PRUPE_ppa019010mg [Prunus persica] gb|EMJ04190.1| hypotheti760001157 (4)ref|XP_006388385.1|5e-56hypothetical protein POPTR_0202s00220g [Populus trichocarpa] gb|ERP47299.1| hypo
JMFF047O22Sequence439013314 (46)ref|XP_004148074.1|5e-28PREDICTED: patatin group A-3-like [Cucumis sativus]320001157 (4)ref|XP_007202991.1|2e-06hypothetical protein PRUPE_ppa019010mg [Prunus persica] gb|EMJ04190.1| hypotheti
JMFN003L04Sequence498001157 (4)ref|XP_009626816.1|3e-31PREDICTED: patatin-like protein 3 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF037C17+ CTTTGATATCAAGACCTTCCCAGCCCGGTAGTTTTTACCAC
                      ____________________________________________________________
consensus CTTTGATATCAAGACCTTCCCAGCCCGGTAGTTTTTACCAC
 
. : . : . : . : . : . :
rJMFF037C17+ CTGTGACGTTAAGGATTCCCCCGAAAAGAATGCTAAGTTGTCCGACATATGCATCGGAAC
                      ____________________________________________________________
consensus CTGTGACGTTAAGGATTCCCCCGAAAAGAATGCTAAGTTGTCCGACATATGCATCGGAAC
 
. : . : . : . : . : . :
rJMFF037C17+ CTCCGCCGCTCCGACTTACTTACCCGGCCATTACTTCGAGACCACCGACGCTAACGGCGC
                      ____________________________________________________________
consensus CTCCGCCGCTCCGACTTACTTACCCGGCCATTACTTCGAGACCACCGACGCTAACGGCGC
 
. : . : . : . : . : . :
rJMFF037C17+ AAAGGTCGAGTATAACCTCGTCGACGGCGGTGTTTTGGGGTGGCTGTCTCAAGGGGACGG
                      ____________________________________________________________
consensus AAAGGTCGAGTATAACCTCGTCGACGGCGGTGTTTTGGGGTGGCTGTCTCAAGGGGACGG
 
. : . : . : . : . : . :
JMFN003L04- CCGATATGGTGGATTATCATCTCGC
rJMFF037C17+ TAACCCTTTGATTGATGTGTTCTCCGATGCAAGTTCCGATATGGTGGATTATCATCTCGC
                      ____________________________________________________________
consensus TAACCCTTTGATTGATGTGTTCTCCGATGCAAGTTCCGATATGGTGGATTATCATCTCGC
 
. : . : . : . : . : . :
JMFN003L04- CACCATTTTCCGTGCCCTTAACGCCGGAGATAATTATCTCCGCATTCAGGAGGATAATTT
rJMFF037C17+ CACCATTTTCCGTGCCCTTAACGCCGGAGATAATTATCTCCGCATTCAGGAGGATAATTT
                      ____________________________________________________________
consensus CACCATTTTCCGTGCCCTTAACGCCGGAGATAATTATCTCCGCATTCAGGAGGATAATTT
 
. : . : . : . : . : . :
JMFN003L04- ACGAGGGTCAGCATCCTCGGTGGATGTTACGACAACAGAAAACTTGAATGCACTTGAACA
rJMFF037C17+ ACGAGGGTCAGCATCCTCGGTGGATGTTACGACAACAGAAAACTTGAATGCACTTGAACA
                      ____________________________________________________________
consensus ACGAGGGTCAGCATCCTCGGTGGATGTTACGACAACAGAAAACTTGAATGCACTTGAACA
 
. : . : . : . : . : . :
JMFN003L04- AATTGGCAAAAACTTGTTGAAGAAAGCAGTATCGAAGTTGGATATATTAACAGGGCAATA
rJMFF047O22+ CGAAGTTGGATATATTAACAGGGCAATA
rJMFF037C17+ AATTGGCAAAAACTTGTTGAAGAAAGCAGTATCGAAGTTGGATATATTAACAGGGCAATA
                      ____________________________________________________________
consensus AATTGGCAAAAACTTGTTGAAGAAAGCAGTATCGAAGTTGGATATATTAACAGGGCAATA
 
. : . : . : . : . : . :
JMFN003L04- TGAACCGATCGAAGGCGCTGGAACAAACCAAGATGCTCTGAAAAGGTTTGCTAAATTGCT
rJMFF047O22+ TGAACCGATCGAAGGCGCTGGAACAAACCAAGATGCTCTGAAAAGGTTTGCTAAATTGCT
rJMFF011H08+ AGGCGCTGGANCAANCCAAGATGCTCTGAAAAGGTTTGCTAAATTGCT
rJMFF037C17+ TGAACCGATCGAAGGCGCTGGAACAAACCAAGATGCTCTGAAAAGGTTTGCTAAATTGCT
                      ____________________________________________________________
consensus TGAACCGATCGAAGGCGCTGGAACAAACCAAGATGCTCTGAAAAGGTTTGCTAAATTGCT
 
. : . : . : . : . : . :
JMFN003L04- CTCTGACGAGAAGAAACGCCGAATCGCCGCTTCTGCCACCGCTGTCCAGT-AATTGATAT
rJMFF047O22+ CTCTGACGAGAAGAAACGCCGAATCGCCGCTTCTGCCACCGCTGTCCAGT-AATTGATAT
rJMFF011H08+ CTCTGACGAGAAGAAACGCCGAATCGCCGCTTCTGCCACCGCTGTCCAGTAAATTGATAT
rJMFF037C17+ CTCTGACGAGAAGAAACGCCGAATCGCCGCTTCTGCCACCGCTGTCCAGT-AATTGATAT
                      ____________________________________________________________
consensus CTCTGACGAGAAGAAACGCCGAATCGCCGCTTCTGCCACCGCTGTCCAGT-AATTGATAT
 
. : . : . : . : . : . :
JMFN003L04- GTTGATCATCAGTGATTTCCGAAGTACTTTGAATTGATTTACTGGAAGTCCATAACCTTA
rJMFF047O22+ GTTGATCATCAGTGATTTCCGAAGTACTTTGAATTGATTTACTGGAAGTCCATAACCTTA
rJMFF011H08+ GTTGATCATCAGTGATTTCCGAAGTACTTTGAATTGATTTACTGGAAGTCCATAACCTTA
rJMFF037C17+ GTTGATCATCAGTGATTTCCGAAGTACTTTGAATTGATTTACTGGAAGTCCATAACCTTA
                      ____________________________________________________________
consensus GTTGATCATCAGTGATTTCCGAAGTACTTTGAATTGATTTACTGGAAGTCCATAACCTTA
 
. : . : . : . : . : . :
JMFN003L04- TTATACCCGAGATCACTTCTTTAATTACATAATAATAATGAGATTGAGTGCCTTTTATTT
rJMFF047O22+ TTATACCCGAGATCACTTCTTTAATTACATAATAATAATGAGATTGAGTGCCTTTTATTT
rJMFF011H08+ TTATACCCGAGATCACTTCTTTAATTACATAATAATAATGAGATTGAGTGCCTTTTATTT
rJMFF037C17+ TTATACCCGAGATCACTTCTTTAATTACATAATAATAATGAGATTGAGTGCCTTTTATTT
                      ____________________________________________________________
consensus TTATACCCGAGATCACTTCTTTAATTACATAATAATAATGAGATTGAGTGCCTTTTATTT
 
. : . : . : . : . : . :
JMFN003L04- TCTGGTTCTTGAATTGTACTTGTTATGAGAACAATAAAGGTTTGTATTGAATCC
rJMFF047O22+ TCTGGTTCTTGAATTGTACTTGTTATGAGAACAATAAAGGTTTGTATTGAA
rJMFF011H08+ TCTGGTTCTTGAATTGTACTTGTTATGAGAACAATAAAGG
rJMFF037C17+ TCTGGTTCTTGAATTGTACTTGTTATGAGAACAATAAAGGTTTGTATTGAATCCTTTTCT
                      ____________________________________________________________
consensus TCTGGTTCTTGAATTGTACTTGTTATGAGAACAATAAAGGTTTGTATTGAATCCTTTTCT