| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF005G02 | Sequence | 472 | 017310 | ref|XP_011461599.1| | 4e-12 | PREDICTED: calcineurin B-like protein 3 isoform X1 [Fragaria vesca subsp. vesca | 706 | 001154 (8) | ref|XP_009591409.1| | 1e-121 | PREDICTED: calcineurin B-like protein 3 [Nicotiana tomentosiformis] ref|XP_00978 |
| JMFF026G03 | Sequence | 567 | 001154 (8) | ref|XP_004294910.1| | 3e-59 | PREDICTED: calcineurin B-like protein 3 isoform X2 [Fragaria vesca subsp. vesca | 750 | 001154 (8) | ref|NP_001239046.1| | 5e-133 | calcineurin B-like 2 [Solanum lycopersicum] ref|XP_010324187.1| PREDICTED: calci |
| JMFF031A01 | Sequence | 580 | 001154 (8) | ref|XP_004294910.1| | 2e-67 | PREDICTED: calcineurin B-like protein 3 isoform X2 [Fragaria vesca subsp. vesca | 625 | 001154 (8) | ref|XP_009591409.1| | 3e-103 | PREDICTED: calcineurin B-like protein 3 [Nicotiana tomentosiformis] ref|XP_00978 |
| JMFF036C20 | Sequence | 531 | 014209 | ref|XP_004294910.1| | 9e-40 | PREDICTED: calcineurin B-like protein 3 isoform X2 [Fragaria vesca subsp. vesca | 699 | 001154 (8) | ref|XP_009591409.1| | 1e-120 | PREDICTED: calcineurin B-like protein 3 [Nicotiana tomentosiformis] ref|XP_00978 |
| JMSF052A21 | Sequence | 657 | 001154 (8) | ref|XP_011097728.1| | 3e-59 | PREDICTED: calcineurin B-like protein 3 isoform X2 [Sesamum indicum] | 903 | 001154 (8) | ref|XP_009591409.1| | 3e-129 | PREDICTED: calcineurin B-like protein 3 [Nicotiana tomentosiformis] ref|XP_00978 |
This contig is upended
. : . : . : . : . : . :
JMFF031A01- AAGGATC
JMSF052A21- GACGGGAAGGATC
____________________________________________________________
consensus GACGGGAAGGATC
. : . : . : . : . : . :
JMFF031A01- AAAGGGAGGCACGGAAAGCATCGTGATTTTTGTGTTGTGCGTCAGCAGAGGTAGAATTCA
JMSF052A21- AAAGGGAGGCACGGAAAGCATCGTGATTTTTGTGTTGTGCGTCAGCAGAGGTAGAATTCA
____________________________________________________________
consensus AAAGGGAGGCACGGAAAGCATCGTGATTTTTGTGTTGTGCGTCAGCAGAGGTAGAATTCA
. : . : . : . : . : . :
JMFF026G03- AGATTAATTTGAAAGAGATACATAA
JMFF031A01- TAGCTGTCTCGGCTCTGTTTCTCTTTAATCTATAAAGATTAATTTGAAAGAGATACATAA
JMSF052A21- TCGCTGTCTCGGCTCTGTTTCTCTTTAATCTATAAAGATTAATTTGAAAGAGATACATAA
____________________________________________________________
consensus TCGCTGTCTCGGCTCTGTTTCTCTTTAATCTATAAAGATTAATTTGAAAGAGATACATAA
. : . : . : . : . : . :
JMFF026G03- CTTTGTATAGTCGTCCTTCACAACAACATTCAGCATTTTGTGTTCAGACTAACAGAAGTA
JMFF031A01- CTTTGTATAGTCGTCCTTCACAACAACATTCAGCATTTTGTGTTCAGACTAACAGAAGTA
JMSF052A21- CTTTGTATAGTCGTCCTTCACAACAACATTCAGCATTTTGTGTTCAGACTAACAGAAGTA
rJMSF052A21+ AAGTA
____________________________________________________________
consensus CTTTGTATAGTCGTCCTTCACAACAACATTCAGCATTTTGTGTTCAGACTAACAGAAGTA
. : . : . : . : . : . :
JMFF026G03- GAGAATGGTCAAGAGGTATGGAGCATTTTGATGTGCAGGAGTTACCATGTTGCAGTGTTT
JMFF031A01- GAGAATGGTCAAGAGGTATGGAGCATTTTGATGTGCAGGAGTTACCATGTTGCAGTGTTT
JMSF052A21- GAGAATGGTCAAGAGGTATGGAGCATTTTGATGTGCAGGAGTTACCATGTTGCAGTGTTT
rJMSF052A21+ GAGAATGGTCNAGAGGTATGGAGCATTTTGATGTGCAGGAGTTACCATGTTGCAGTGTTT
____________________________________________________________
consensus GAGAATGGTCAAGAGGTATGGAGCATTTTGATGTGCAGGAGTTACCATGTTGCAGTGTTT
. : . : . : . : . : . :
JMFF026G03- AGAGGGAATCAAGCATTTGGGTGCTTCCTTAGTACGGTGTTGTGATCTCGATTTGTATAG
JMFF031A01- AGAGGGAATCAAGCATTTGGGTGCTTCCTTAGTACGGTGTTGTGATCTCGATTTGTATAG
JMSF052A21- AGAGGGAATCAAGCATTTGGGTGCTTCCTTAGTACGGTGTTGTGATCTCGATTTGTATAG
rJMSF052A21+ AGAGGGAATCAAGCATTTGGGTGCTTCCTTAGTACGGTGTTGTGATCTCGATTTGTATAG
____________________________________________________________
consensus AGAGGGAATCAAGCATTTGGGTGCTTCCTTAGTACGGTGTTGTGATCTCGATTTGTATAG
. : . : . : . : . : . :
JMFF026G03- GCAAACAAGGGGCCTTGACGATCCTGAAGTCCTTGCACGAGAAACCGTGTTTAGTGTTAG
JMFF031A01- GCAAACAAGGGGCCTTGACGATCCTGAAGTCCTTGCACGAGAAACCGTGTTTAGTGTTAG
JMSF052A21- GCAAACAAGGGGCCTTGACGATCCTGAAGTCCTTGCACGA-AAACCGTGTTTAGTGTTAG
rJMSF052A21+ GCAAACAAGGGGCCTTGACGATCCTGAAGTCCTTGCACGA-AAACCGTGTTTAGTGTTAG
rJMFF026G03+ CCTTGCACGAGAAACCGTGTTTAGTGTTAG
____________________________________________________________
consensus GCAAACAAGGGGCCTTGACGATCCTGAAGTCCTTGCACGAGAAACCGTGTTTAGTGTTAG
. : . : . : . : . : . :
JMFF026G03- TGAAATTGAAGCACTCTATGAGTTATTTAAGAAGATTAGCAGTGCTGTGATTGATGACGG
JMFF031A01- TGGAATTGAAGCACTCTATGAGTTATTTAAGAAGATTAGCAGTGCTGTGATTGATGACGG
JMSF052A21- TGAAATTGAAGCACTCTATGAGTTATTTAAGAAGATTAGCAGTGCTGTGATTGATGACGG
rJMSF052A21+ TGAAATTGAAGCACTCTATGAGTTATTTAAGAAGATTAGCAGTGCTGTGATTGATGACGG
rJMFF026G03+ TGAAATTGAAGCACTCTATGAGTTATTTAAGAAGATTAGCAGTGCTGTGATTGATGACGG
rJMFF005G02+ TCTATGAGTTATTTAAGAAGATTAGCAGTGCTGTGATTGATGACGG
rJMFF036C20+ GTTATTTAAGAAGATTAGCAGTGCTGTGATTGATGACGG
____________________________________________________________
consensus TGAAATTGAAGCACTCTATGAGTTATTTAAGAAGATTAGCAGTGCTGTGATTGATGACGG
. : . : . : . : . : . :
JMFF026G03- GCTGATCAATAAGGAAGAGTTCCAATTGGCCCTATTCAAGACAAACAAAAAGGAAAGCTT
JMFF031A01- GCTGATCAATAAGGAAGAGTTCCAATTGGCCCTATTCAAGACAAACAAAAAGGAAAGCTT
JMSF052A21- GCTGATCAATAAGGAAGAGTTCCAATTGGCCCTATTCAAGACAAACAAAAAGGAAAGCTT
rJMSF052A21+ GCTGATCAATAAGGAAGAGTTCCAATTGGCCCTATTCAAGACAAACAAAAAGGAAAGCTT
rJMFF026G03+ GCTGATCAATAAGGAAGAGTTCCAATTGGCCCTATTCAAGACAAACAAAAAGGAAAGCTT
rJMFF005G02+ GCTGATCAATAAGGAAGAGTTCCAATTGGCCNTATTCAAGACAAACAAAAAGGAAAGCTT
rJMFF031A01+ TTCAAGACAAACAAAAAGGAAAGCTT
rJMFF036C20+ GCTGATCAATAAGGAAGAGTTCCAATTGGCCCTATTCAAGACAAACAAAAAGGAAAGCTT
____________________________________________________________
consensus GCTGATCAATAAGGAAGAGTTCCAATTGGCCCTATTCAAGACAAACAAAAAGGAAAGCTT
. : . : . : . : . : . :
JMFF026G03- GTTTGCTGATCGGGTGTTTGACTTGTTTGACACGAAGCATAATGGAATCCTTGG
JMFF031A01- GTTTGCTGATCGGGTGTTTGACTTGTTTGACACGAAGCATAATGGAATCCTTGGTTTTGA
JMSF052A21- GTTTGCTGATCGGGTGTTTGACTTGTTTGACACGAAGCATAATGGAATCCTTGGTTTTGA
rJMSF052A21+ GTTTGCTGATCGGGTGTTTGACTTGTTTGACACGAAGCATAATGGAATCCTTGGTTTTGA
rJMFF026G03+ GTTTGCTGATCGGGTGTTTGACTTGTTTGACACGAAGCATAATGGAATCCTTGGTTTTGA
rJMFF005G02+ GTTTGCTGATCGGGTGTTTGACTTGTTTGACACGAAGCATAATGGAATCCTTGGTTTTGA
rJMFF031A01+ GTTTGCTGATCGGGTGTTTGACTTGTTTGACACGAAGCATAATGGAATCCTTGGTTTTGA
rJMFF036C20+ GTTTGCTGATCGGGTGTTTGACTTGTTTGACACGAAGCATAATGGAATCCTTGGTTTTGA
____________________________________________________________
consensus GTTTGCTGATCGGGTGTTTGACTTGTTTGACACGAAGCATAATGGAATCCTTGGTTTTGA
. : . : . : . : . : . :
JMFF031A01- GGAGTTTGCTCGTGCACTGTCTGTTTTT
JMSF052A21- GGAGTTTGCTCGTGCACTGTCTGTTTTTCATCCNAATGCCCCTATTGATGATAAGATTGA
rJMSF052A21+ GGAGTTTGCTCGTGCACTGTCTGTTTTTCATCCAAATGCCCCTATTGATGATAAGATTGA
rJMFF026G03+ GGAGTTTGCTCGTGCACTGTCTGTTTTTCATCCAAATGCCCCTATTGATGATAAGATTGA
rJMFF005G02+ GGAGTTTGCTCGTGCACTGTCTGTTTTTCATCCAAATGCCCCTATTGATGATAAGATTGA
rJMFF031A01+ GGAGTTTGCTCGTGCACTGTCTGTTTTTCATCCAAATGCCCCTATTGATGATAAGATTGA
rJMFF036C20+ GGAGTTTGCTCGTGCACTGTCTGTTTTTCATCCAAATGCCCCTATTGATGATAAGATTGA
____________________________________________________________
consensus GGAGTTTGCTCGTGCACTGTCTGTTTTTCATCCAAATGCCCCTATTGATGATAAGATTGA
. : . : . : . : . : . :
JMSF052A21- GTTTTCTTTTCAACTATATGATCTCAAGCACCANGGCTTCATTGA
rJMSF052A21+ GTTTTCTTTTCAACTATATGATCTCAAGCAACAAGGCTTCATTGAGAGACAAGAGGTGAA
rJMFF026G03+ GTTTTCTTTTCAACTATATGATCTCAAGCAACAAGGCTTCATTGAGAGACAAGAGGTGAA
rJMFF005G02+ GTTTTCTTTTCAACTATATGATCTCAAGCAACAAGGCTTCATTGAGAGACAAGAGGTGAA
rJMFF031A01+ GTTTTCTTTTCAACTATATGATCTCAAGCAACAAGGCTTCATTGAGAGACAAGAGGTGAA
rJMFF036C20+ GTTTTCTTTTCAACTATATGATCTCAAGCAACAAGGCTTCATTGAGAGACAAGAGGTGAA
____________________________________________________________
consensus GTTTTCTTTTCAACTATATGATCTCAAGCAACAAGGCTTCATTGAGAGACAAGAGGTGAA
. : . : . : . : . : . :
rJMSF052A21+ GCAAATGGTGGTTGCTACCCTTGCTGAATCGGGCATGAACCTTTCAGATGATGTTATCGA
rJMFF026G03+ GCAAATGGTGGTTGCTACCCTTGCTGAATCGGGCATGAACCTTTCAGATGATGTTATCGA
rJMFF005G02+ GCAAATGGTGGTTGCTACCCTTGCTGAATCGGGCATGAACCTTTCAGATGATGTTATCGA
rJMFF031A01+ GCAAATGGTGGTTGCTACCCTTGCTGAATCGGGCATGAACCTTTCAGATGATGTTATCGA
rJMFF036C20+ GCAAATGGTGGTTGCTACCCTTGCTGAATCGGGCATGAACCTTTCAGATGATGTTATCGA
____________________________________________________________
consensus GCAAATGGTGGTTGCTACCCTTGCTGAATCGGGCATGAACCTTTCAGATGATGTTATCGA
. : . : . : . : . : . :
rJMSF052A21+ AAGTATTATTGACAAGACCTTTGAGGAAGCTGATACAAAACATGACGGGAAGATTGATAA
rJMFF026G03+ AAGTATTATTGACAAGACCTTTGAGGAAGCTGATACAAAACATGACGGGAAGATTGATAA
rJMFF005G02+ AAGTATTATTGACAAGACCTTTGAGGAAGCTGATACAAAACATGACGGGAAGATTGATAA
rJMFF031A01+ AAGTATTATTGACAAGACCTTTGAGGAAGCTGATACAAAACATGACGGGAAGATTGATAA
rJMFF036C20+ AAGTATTATTGACAAGACCTTTGAGGAAGCTGATACAAAACATGACGGGAAGATTGATAA
____________________________________________________________
consensus AAGTATTATTGACAAGACCTTTGAGGAAGCTGATACAAAACATGACGGGAAGATTGATAA
. : . : . : . : . : . :
rJMSF052A21+ GGAGGAATGGAGGAATCTCGTCTTGCGACACCCATCGCTTCTGAAGAATATGACCCTTCA
rJMFF026G03+ GGAGGAATGGAGGAATCTCGTCTTGCGACACCCATCGCTTCTGAAGAATATGACCCTTCA
rJMFF005G02+ GGAGGAATGGAGGAATCTCGTCTTGCGACACCCATCGCTTCTGAAGAATATGACCCTTCA
rJMFF031A01+ GGAGGAATGGAGGAATCTCGTCTTGCGACACCCATCGCTTCTGAAGAATATGACCCTTCA
rJMFF036C20+ GGAGGAATGGAGGAATCTCGTCTTGCGACACCCATCGCTTCTGAAGAATATGACCCTTCA
____________________________________________________________
consensus GGAGGAATGGAGGAATCTCGTCTTGCGACACCCATCGCTTCTGAAGAATATGACCCTTCA
. : . : . : . : . : . :
rJMSF052A21+ GTACCTCAAGGACATTACAACTACGTTTCCAAGCTTTGTGTTTCACTCGAGAGTCGAGGA
rJMFF026G03+ GTACCTCAAGGACATTACAACTACGTTTCCAAGCTTTGTGTTTCACTCGAGAGTCGAGGA
rJMFF005G02+ GTACCTCAAGGACATTACAACTACGTTTCCAAGCTTTGTGTTTCACTCGAGAGTCGAGGA
rJMFF031A01+ GTACCTCAAGGACATTACAACTACGTTTCCAAGCTTTGTGTTTCACTCGAGAGTCGAGGA
rJMFF036C20+ GTACCTCAAGGACATTACAACTACGTTTCCAAGCTTTGTGTTTCACTCGAGAGTCGAGGA
____________________________________________________________
consensus GTACCTCAAGGACATTACAACTACGTTTCCAAGCTTTGTGTTTCACTCGAGAGTCGAGGA
. : . : . : . : . : . :
rJMSF052A21+ TACCTGATAAAGGATTGCTTGTTGCTGCAGTGTTGCATAAGGTTCTTTGATGAAGTCAGC
rJMFF026G03+ TACCTGATAAAGGATTGCTTGTTGCTGCAGTGTTGCATAAGGTTCTTTGATGAAGTCAGC
rJMFF005G02+ TACCTGATAAAGGATTGCTTGTTGCTGCAGTGTTGCATAAGGTTCTTTGATGAAGTCAGC
rJMFF031A01+ TACCTGATAAAGGATTGCTTGTTGCTGCAGTGTTGCATAAGGTTCTTTGATGAAGTCAGC
rJMFF036C20+ TACCTGATAAAGGATTGCTTGTTGCTGCAGTGTTGCATAAGGTTCTTTGATGAAGTCAGC
____________________________________________________________
consensus TACCTGATAAAGGATTGCTTGTTGCTGCAGTGTTGCATAAGGTTCTTTGATGAAGTCAGC
. : . : . : . : . : . :
rJMSF052A21+ TTTTCTTCATTTCTTGCTACCATGTTGCTACTATGATACATACATATATTTGTATTGCAT
rJMFF026G03+ TTTTCTTCATTTCTCGCTACCATGTTGCTACTATGATACATACATATATTTGTATTGCAT
rJMFF005G02+ TTTTCTTCATTTCTTGCTACCATGTTGCTACTATGATACATACATATATTTGTATTGCAT
rJMFF031A01+ TTTTCTTCATTTCTTGCTACCATGTTGCTACTATGATACATACATATATTTGTATTGCAT
rJMFF036C20+ TTTTCTTCATTTCTTGCTACCATGTTGCTACTATGATACATACATATATTTGTATTGCAT
____________________________________________________________
consensus TTTTCTTCATTTCTTGCTACCATGTTGCTACTATGATACATACATATATTTGTATTGCAT
. : . : . : . : . : . :
rJMSF052A21+ TGCGGTTTTCTTTTATTCTATCATTATTAAGTGATTTGTTATTCTTTTTGGGATCAGTT
rJMFF026G03+ TGCGGTTTTCTTTTATTCTATCATTATTAAGTGATTTGTTATTCTTTTTGGGATCAGTT
rJMFF005G02+ TGCGGTTTTCTTTTATTCTATCATTATTAAGTGATTTGTTATTCTTTTTGGGATCAGTT
rJMFF031A01+ TGCGGTTTTCTTTTATTCTATCATTATTAAGTGATTTGTTATTCTTTTTGGGATCAGTT
rJMFF036C20+ TGCGGTTTTCTTTTATTCTATCATTATTAAGTGATTTGTTATTCTTTTTGGGATCAGTTG
____________________________________________________________
consensus TGCGGTTTTCTTTTATTCTATCATTATTAAGTGATTTGTTATTCTTTTTGGGATCAGTTG