Contig 001128:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF012P09+                                                        CCACAAGAGTTTGA
                      ____________________________________________________________
consensus                                                           CCACAAGAGTTTGA
 
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rJMFF012P09+          GAAAAGAAAAGGGGAGCTTGTGCAAAGGACAAAGGATCTATACTTGGACAAGCTTAGAGA
                      ____________________________________________________________
consensus             GAAAAGAAAAGGGGAGCTTGTGCAAAGGACAAAGGATCTATACTTGGACAAGCTTAGAGA
 
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rJMFF012P09+          CTATGCAAAAGTTGTAAGCACTGATCTTAGCTGATTTTGAATTCAATTTTGACAGCTGAA
                      ____________________________________________________________
consensus             CTATGCAAAAGTTGTAAGCACTGATCTTAGCTGATTTTGAATTCAATTTTGACAGCTGAA
 
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rJMFF012P09+          ATCTGCAGCAGTTCTGGAAATATCTGAGATGCTCGTGAACTCTGGTCTTAGAAAATGGAG
                      ____________________________________________________________
consensus             ATCTGCAGCAGTTCTGGAAATATCTGAGATGCTCGTGAACTCTGGTCTTAGAAAATGGAG
 
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rJMFF012P09+          GCAAAAGGAGGTCCATCTAGCTAGATGGACTAGGATTGACTGAAAAAAGGGATTTGAGTG
                      ____________________________________________________________
consensus             GCAAAAGGAGGTCCATCTAGCTAGATGGACTAGGATTGACTGAAAAAAGGGATTTGAGTG
 
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rJMFF012P09+          TTGGTTGGGGAAATTCTGACTGAAAGCTGATTTATAACCTCTGATTTGCAGTCAAACCCA
                      ____________________________________________________________
consensus             TTGGTTGGGGAAATTCTGACTGAAAGCTGATTTATAACCTCTGATTTGCAGTCAAACCCA
 
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rJMFF012P09+          AAGCTTTGTGAAGTGGAGGGAATGGCTGCCATGGTGTTGATACTATGGGAAATGATGCAC
                      ____________________________________________________________
consensus             AAGCTTTGTGAAGTGGAGGGAATGGCTGCCATGGTGTTGATACTATGGGAAATGATGCAC
 
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rJMFF012P09+          CATGCTTGTCATGCCTGGAGGTGAATGGAAAATAGAAAGAAGCAGGAGAAAGGAGAGTTG
                      ____________________________________________________________
consensus             CATGCTTGTCATGCCTGGAGGTGAATGGAAAATAGAAAGAAGCAGGAGAAAGGAGAGTTG
 
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rJMFF012P09+          CTATGGTTTTGATTTAGAGTAAAGCAACATCCTAGAGCATTCTATCTGAAGGGGTGTTGC
                      ____________________________________________________________
consensus             CTATGGTTTTGATTTAGAGTAAAGCAACATCCTAGAGCATTCTATCTGAAGGGGTGTTGC
 
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rJMFF012P09+          TGTCAAGTGGATGATCCCTGTGCTCTGATGGCTCTGAAGTGCTGAAGGCTGATCTGTTTT
                      ____________________________________________________________
consensus             TGTCAAGTGGATGATCCCTGTGCTCTGATGGCTCTGAAGTGCTGAAGGCTGATCTGTTTT
 
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rJMFF012P09+          AAGCACTTTTGGGCTCTAATTTGGTGAGCCCATTGGGCCTTTGCCTGCTTAGGTTTTTTT
rJMFF029B04+                                               CCTTTGCCTGCTTAGGTTTTTTT
                      ____________________________________________________________
consensus             AAGCACTTTTGGGCTCTAATTTGGTGAGCCCATTGGGCCTTTGCCTGCTTAGGTTTTTTT
 
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rJMFF012P09+          AGCCCTTTGTAGATAGCCTTGTTAGACTTTTATTTGTTAGTCCATTATGGACCTTTTGTT
rJMFF029B04+          AGCCCTTTGTAGATAGCCTTGTTAGACTTTTATTTGTTAGTCCATTATGGACCTTTTGTT
                      ____________________________________________________________
consensus             AGCCCTTTGTAGATAGCCTTGTTAGACTTTTATTTGTTAGTCCATTATGGACCTTTTGTT
 
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rJMFF012P09+          TGTGAGGGCCTTGGGCCCCTTGGTTGTTTAGACTTTAAAAGCCCTTGTGATTTTTGAGCC
rJMFF029B04+          TGTGAGGGCCTTGGGCCCCTTGGTTGTTTAGACTTTAAAAGCCCTTGTGATTTTTGAGCC
                      ____________________________________________________________
consensus             TGTGAGGGCCTTGGGCCCCTTGGTTGTTTAGACTTTAAAAGCCCTTGTGATTTTTGAGCC
 
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rJMFF012P09+          TTAGGTCACATTTGGGCCTAAGGCGTCTAGTTGTAAGGCTTCGGCCTCTTG         
rJMFF029B04+          TTAGGTCACATTTGGGCCTAAGGCGTCTAGTTGTAAGGCTTCGGCCTCTTGTGTTTGACT
                      ____________________________________________________________
consensus             TTAGGTCACATTTGGGCCTAAGGCGTCTAGTTGTAAGGCTTCGGCCTCTTGTGTTTGACT