| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF010O11 | Sequence | 570 | 001804 (5) | emb|CAA07280.1| | 3e-56 | purple acid phosphatase [Ipomoea batatas] | 787 | 001114 (4) | emb|CAA07280.1| | 7e-159 | purple acid phosphatase [Ipomoea batatas] |
| JMFF024D08 | Sequence | 516 | 001804 (5) | emb|CAA07280.1| | 4e-59 | purple acid phosphatase [Ipomoea batatas] | 772 | 001114 (4) | emb|CAA07280.1| | 5e-144 | purple acid phosphatase [Ipomoea batatas] |
| JMFN039J03 | Sequence | 529 | 001114 (4) | emb|CAA07280.1| | 4e-90 | purple acid phosphatase [Ipomoea batatas] | |||||
| JMSF014O04 | Sequence | 461 | 001804 (5) | emb|CAA07280.1| | 1e-55 | purple acid phosphatase [Ipomoea batatas] | 198 | 001114 (4) | gb|AAM64882.1| | 4e-19 | unknown [Arabidopsis thaliana] |
This contig is upended
. : . : . : . : . : . :
rJMFF010O11+ GACTGCTGGAAATCCACGAAATTGATTTTGTTCCCGATATTGGTGAAACCGTGCCGTT
____________________________________________________________
consensus GACTGCTGGAAATCCACGAAATTGATTTTGTTCCCGATATTGGTGAAACCGTGCCGTT
. : . : . : . : . : . :
rJMFF010O11+ CAAACCTTTCACGCATCGGTATTTTATGCCATTTGAATCGTCGGGGAGTACTTCTCCTCT
rJMFF024D08+ TCACGCATCGGTATTTTATGCCATTTGAATCGTCGGGGAGTACTTCTCCTCT
____________________________________________________________
consensus CAAACCTTTCACGCATCGGTATTTTATGCCATTTGAATCGTCGGGGAGTACTTCTCCTCT
. : . : . : . : . : . :
rJMFF010O11+ TTGGTACTCGATAAAAAGAGCTTCAGCGCATATCATTGTCATGTCTTCTTACTCGGCTTA
rJMFF024D08+ TTGGTACTCGATAAAAAGAGCTTCAGCGCATATCATTGTCATGTCTTCTTACTCGGCTTA
____________________________________________________________
consensus TTGGTACTCGATAAAAAGAGCTTCAGCGCATATCATTGTCATGTCTTCTTACTCGGCTTA
. : . : . : . : . : . :
rJMFF010O11+ TGGTACATACACTCCTCAGTGGAAATGGTTGCAAGGCGAACTACCTAAAGTTAACAGAAG
rJMFF024D08+ TGGTACATACACTCCTCAGTGGAAATGGTTGCAAGGCGAACTACCTAAAGTTAACAGAAG
____________________________________________________________
consensus TGGTACATACACTCCTCAGTGGAAATGGTTGCAAGGCGAACTACCTAAAGTTAACAGAAG
. : . : . : . : . : . :
rJMFF010O11+ CGAGACGCCATGGCTAATCGTGCTCATGCATAGCCCGATGTATAGTAGCTATGTGCATCA
rJMFF024D08+ CGAGACGCCATGGCTAATCGTGCTCATGCATAGCCCGATGTATAGTAGCTATGTGCATCA
____________________________________________________________
consensus CGAGACGCCATGGCTAATCGTGCTCATGCATAGCCCGATGTATAGTAGCTATGTGCATCA
. : . : . : . : . : . :
rJMFF010O11+ CTATATGGAAGGGGAAACCATGCGAGTGCTATATGAACCCTGGTTCGTGCAGTACAAAGT
JMFN039J03- GAAGGGGAAACCATGCGAGTGCTATATGAACCCTGGTTCGTGCAGTACAAAGT
rJMFF024D08+ CTATATGGAAGGGGAAACCATGCGAGTGCTATATGAACCCTGGTTCGTGCAGTACAAAGT
____________________________________________________________
consensus CTATATGGAAGGGGAAACCATGCGAGTGCTATATGAACCCTGGTTCGTGCAGTACAAAGT
. : . : . : . : . : . :
rJMFF010O11+ CGATGTTGTTTTTGCTGGTCACGTTCACGCATACGAACGATCTGAACGTGTATCAAATAT
JMFN039J03- CGATGTTGTTTTTGCTGGTCACGTTCACGCATACGAACGATCTGAACGTGTATCAAATAT
rJMSF014O04+ TGTATCAAATAT
rJMFF024D08+ CGATGTTGTTTTTGCTGGTCACGTTCACGCATACGAACGATCTGAACGTGTATCAAATAT
____________________________________________________________
consensus CGATGTTGTTTTTGCTGGTCACGTTCACGCATACGAACGATCTGAACGTGTATCAAATAT
. : . : . : . : . : . :
rJMFF010O11+ CGCCTACAACATTGTAAACGGGTTGTGCAGTCCAAAGAATGACAACTCTGCCCCCGTTTA
JMFN039J03- CGCCTACAACATTGTAAACGGGTTGTGCAGTCCAAAGAATGACAACTCTGCCCCCGTTTA
rJMSF014O04+ CGCNTANAACATTGTACACGGGTTGNGCAGTCCANAGAANGACAANTCTNCCCCCGTTTA
rJMFF024D08+ CGCCTACAACATTGTAAACGGGTTGTGCAGTCCAAAGAATGACAACTCTGCCCCCGTTTA
____________________________________________________________
consensus CGCCTACAACATTGTAAACGGGTTGTGCAGTCCAAAGAATGACAACTCTGCCCCCGTTTA
. : . : . : . : . : . :
rJMFF010O11+ TATCACCATAGGAGACGGGGGGAATTCAGAAGGATTAGTCACCGAGATGACACAGCCACA
JMFN039J03- TATCACCATAGGAGACGGGGGGAATTCAGAAGGATTAGTCACCGAGATGACACAGCCACA
rJMSF014O04+ TATCACCATNNGNGACGGGGGGAATTCAGAAGGNTTAGTCACNGAGATGACACAGCC
rJMFF024D08+ TATCACCATAGGAGACGGGGGGAATTCAGAAGGATTAGTCACCGAGATGACACAGCCACA
____________________________________________________________
consensus TATCACCATAGGAGACGGGGGGAATTCAGAAGGATTAGTCACCGAGATGACACAGCCACA
. : . : . : . : . : . :
rJMFF010O11+ ACCAAGTTACTCTGCTTACCGAGAAGCCAGCTTTGGCCATGGCATCTTCGATATCAAGAA
JMFN039J03- ACCAAGTTACTCTGCTTACCGAGAAGCCAGCTTTGGCCATGGCATCTTCGATATCAAGAA
rJMFF024D08+ ACCAAGTTACTCTGCTTACCGAGAAGCCAGCTTTGGCCATGGCATCTTCGATATCAAGAA
____________________________________________________________
consensus ACCAAGTTACTCTGCTTACCGAGAAGCCAGCTTTGGCCATGGCATCTTCGATATCAAGAA
. : . : . : . : . : . :
rJMFF010O11+ CAGGACTCACGCGCATTTTGGTTGGCATCGCAATCAAGATGGGTTGGCGGTTGAAGGTGA
JMFN039J03- CAGGACTCACGCGCATTTTGGTTGGCATCGCAATCAAGATGGGTTGGCGGTTGAAGGTGA
rJMFF024D08+ CAGGACTCACGCGCATTTTGGTTGGCATCGCAATCAAGATGGGTTGGCGGTTGAAGGTGA
____________________________________________________________
consensus CAGGACTCACGCGCATTTTGGTTGGCATCGCAATCAAGATGGGTTGGCGGTTGAAGGTGA
. : . : . : . : . : . :
rJMFF010O11+ CTCGCTTTGGTTTATTAACCGGTATTGGATGTCGAAGGAAGAGGCATCTGTATCTGCAGT
JMFN039J03- CTCGCTTTGGTTTATTAACCGGTATTGGATGTCGAAGGAAGAGGCATCTGTATCTGCAGT
rJMFF024D08+ CTCGCTTTGGTTTATTAACCGGTATTGGATGTCGAAGGAAGAGGCATCTGTATCTGCAGT
____________________________________________________________
consensus CTCGCTTTGGTTTATTAACCGGTATTGGATGTCGAAGGAAGAGGCATCTGTATCTGCAGT
. : . : . : . : . : . :
rJMFF010O11+ GTGAAAATCTGCAGTTGAACTAAGTTGTTTGTTATGTAGATTATGAACTTTCTTTACCAA
JMFN039J03- GTGAAAATCTGCATTTGAACTAAGTTGTTTGTTATGTAGATTATGAACTTTCTTTACCAA
rJMFF024D08+ GTGAAAATCTGCAGTTGAACTAAGTTGTTTGTTATGTAGATTATGAACTTTCTTTACCAA
____________________________________________________________
consensus GTGAAAATCTGCAGTTGAACTAAGTTGTTTGTTATGTAGATTATGAACTTTCTTTACCAA
. : . : . : . : . : . :
rJMFF010O11+ ATGCATAAT
JMFN039J03- ATGCATAATAATGTTCTGTTTCTGTAGCTTTCTCTGGTGAAACCATTTGTTCCACT
rJMFF024D08+ ATGCATAATAATGTTCTGTTTCTGTAGCTTTCTCTGGTGAAACCATTTGTTCCACTACAA
____________________________________________________________
consensus ATGCATAATAATGTTCTGTTTCTGTAGCTTTCTCTGGTGAAACCATTTGTTCCACTACAA