Contig 001112:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF023N22Sequence436000398 (5)ref|XP_007023296.1|223Actin-like ATPase superfamily protein isoform 3 [Theobroma cacao] gb|EOY25918.1|777001112 (3)ref|XP_011081977.1|6e-62PREDICTED: glycerol kinase [Sesamum indicum]
JMSF014I14Sequence551000398 (5)ref|XP_002273367.1|6e-97PREDICTED: glycerol kinase [Vitis vinifera] emb|CBI36391.3| unnamed protein prod796001112 (3)ref|XP_011081977.1|6e-64PREDICTED: glycerol kinase [Sesamum indicum]
JMSF041K15Sequence715000398 (5)emb|CDO98178.1|5e-132unnamed protein product [Coffea canephora]750001112 (3)emb|CDO98178.1|2e-121unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF041K15+                                                                 CCAAT
                      ____________________________________________________________
consensus                                                                    CCAAT
 
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rJMSF041K15+          TACGCTTTGGAGGGCTCGANTGCCATTGCTGGTGCTGCTGTTCAGTGGCTCAGGGATAGT
                      ____________________________________________________________
consensus             TACGCTTTGGAGGGCTCGANTGCCATTGCTGGTGCTGCTGTTCAGTGGCTCAGGGATAGT
 
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rJMSF041K15+          CTCAACTTAATCAGCAGCGCAAGTGAGATTGAGCAGCTGGCGTCGAAGGTGGAATCAACC
                      ____________________________________________________________
consensus             CTCAACTTAATCAGCAGCGCAAGTGAGATTGAGCAGCTGGCGTCGAAGGTGGAATCAACC
 
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rJMSF041K15+          GGGGGAGTTTATTTTGTGCCAGCTTTTAATGGGTTGTTTGCTCCGTGGTGGCGGGATGAT
                      ____________________________________________________________
consensus             GGGGGAGTTTATTTTGTGCCAGCTTTTAATGGGTTGTTTGCTCCGTGGTGGCGGGATGAT
 
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rJMSF041K15+          GCTCGGGGAGTTTGTATTGGAATCACGAGGTTTACTAACAAGTGTCACATTGCTCGAGCG
rJMSF014I14+                                TCACGAGGTTTACTAACAAGTGTCACA-TGCTCGAGCG
                      ____________________________________________________________
consensus             GCTCGGGGAGTTTGTATTGGAATCACGAGGTTTACTAACAAGTGTCACATTGCTCGAGCG
 
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rJMSF041K15+          GTTCTTGAGAGCATGTGTTTTCAAGTTCGAGATGTGCTGGATTCAATGCACAAGGACGCT
rJMSF014I14+          GTTCNTGAGAGCATGTGTTTTCAAGTTCGAGATGTGCTGGATTCAATGCACAAGGACGCT
rJMFF023N22+                GAGAGCATGTGTTTTCAAGTTCGAGATGTGCTGGATTCAATGCACAAGGACGCT
                      ____________________________________________________________
consensus             GTTCTTGAGAGCATGTGTTTTCAAGTTCGAGATGTGCTGGATTCAATGCACAAGGACGCT
 
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rJMSF041K15+          GGGGATAAAGGTGAGGTTAAAAATGATCGAGGGGAATTCGTTCTTAGAGTTGATGGTGGT
rJMSF014I14+          GGGGATAAAGGTGAGGTTAAAAATGATCGAGGGGAATTCGTTCTTAGAGTTGATGGTGGT
rJMFF023N22+          GGGGATAAAGGTGAGGTTAAAAATGATCGAGGGGAATTCGTTCTTAGAGTTGATGGTGGT
                      ____________________________________________________________
consensus             GGGGATAAAGGTGAGGTTAAAAATGATCGAGGGGAATTCGTTCTTAGAGTTGATGGTGGT
 
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rJMSF041K15+          GCTACTGTTAACAATCTTCTGATGCAGATTCAGGCGGATTTGTTGGGTAGTCCAGTGGTG
rJMSF014I14+          GCTACTGTTAACAATCTTCTGATGCAGATTCAGGCGGATTTGTTGGGTAGTCCAGTGGTG
rJMFF023N22+          GCTACTGTTAACAATCTTCTGATGCAGATTCAGGCGGATTTGTTGGGTAGTCCAGTGGTG
                      ____________________________________________________________
consensus             GCTACTGTTAACAATCTTCTGATGCAGATTCAGGCGGATTTGTTGGGTAGTCCAGTGGTG
 
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rJMSF041K15+          AGGCCAGCGGACATAGAGACAACAGCCCTCGGGGCAGCATATGCTGCTGGATTAGCTGTT
rJMSF014I14+          AGGCCAGCGGACATAGAGACAACAGCCCTCGGGGCAGCATATGCTGCTGGATTAGCTGTT
rJMFF023N22+          AGGCCAGCGGACATAGAGACAACAGCCCTCGGGGCAGCATATGCTGCTGGATTAGCTGTT
                      ____________________________________________________________
consensus             AGGCCAGCGGACATAGAGACAACAGCCCTCGGGGCAGCATATGCTGCTGGATTAGCTGTT
 
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rJMSF041K15+          GGGATATGGACAGAAGACGAAATATTTTCCAGCGGTGAGAAAATGAAGAAGGACACCATT
rJMSF014I14+          GGGATATGGACAGAAGACGAAATATTTTCCAGCGGTGAGAAAATGAAGAAGGACACCATT
rJMFF023N22+          GGGATATGGACAGAAGACGAAATATTTTCCAGCGGTGAGAAAATGAAGAAGGACACCATT
                      ____________________________________________________________
consensus             GGGATATGGACAGAAGACGAAATATTTTCCAGCGGTGAGAAAATGAAGAAGGACACCATT
 
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rJMSF041K15+          TTCAAACCAGTGATCGAGGAAGAAGTGAGGAAGAAGAAGGTGGATTCTTGGTGCAAAGCT
rJMSF014I14+          TTCAAACCAGTGATCGAGGAAGAAGTGAGGAAGAAGAAGGTGGATTCTTGGTGCAAAGCT
rJMFF023N22+          TTCAAACCAGTGATCGAGGAAGAAGTGAGGAAGAAGAAGGTGGATTCTTGGTGCAAAGCT
                      ____________________________________________________________
consensus             TTCAAACCAGTGATCGAGGAAGAAGTGAGGAAGAAGAAGGTGGATTCTTGGTGCAAAGCT
 
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rJMSF041K15+          GTTTCAAGAACTTTCGACTTGGCTGATCTATCTTTGTAACTGAATTCTCTTCTTTCCTTT
rJMSF014I14+          GTTTCAAGAACTTTCGACTTGGCTGATCTATCTTTGTAACTGAATTCTCTTCTTTCCTTT
rJMFF023N22+          GTTTCAAGAACTTTCGACTTGGCTGATCTATCTTTGTAACTGAATTCTCTTCTTTCCTTT
                      ____________________________________________________________
consensus             GTTTCAAGAACTTTCGACTTGGCTGATCTATCTTTGTAACTGAATTCTCTTCTTTCCTTT
 
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rJMSF041K15+          CAGTACCTATACATTCTTGTTTATATCAGTTAGCAATGTTCTCCCATTACCTCAAGATAA
rJMSF014I14+          CAGTACCTATACATTCTTGTTTATATCAGTTA-CAATGTTCTCCCATTACCTCAAGATAA
rJMFF023N22+          CAGTACCTATACATTCTTGTTTATATCAGTTA-CAATGTTCTCCCATTACCTCAAGATAA
                      ____________________________________________________________
consensus             CAGTACCTATACATTCTTGTTTATATCAGTTA-CAATGTTCTCCCATTACCTCAAGATAA
 
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rJMSF014I14+          CCGTTGGTCTTTGACTATATATATAGTAGCAATAACAGAACTAGTTTTTAACTTTCGATT
rJMFF023N22+          CCGTTGGTCTTTGACTATATATATAGTAGCAATAACAGAACTAGTTTTTAACTTTCGATT
                      ____________________________________________________________
consensus             CCGTTGGTCTTTGACTATATATATAGTAGCAATAACAGAACTAGTTTTTAACTTTCGATT
 
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rJMSF014I14+          TTGACACATTGAGTATTGTTTCACATTCAGCGAAAAATGTCCTCGCTTTGCAGACATTTA
rJMFF023N22+          TTGACACATTGAGTATTGTTTCACATTCAGCGAAAAATGTCCTCGCTTTGCAGACATTTA
                      ____________________________________________________________
consensus             TTGACACATTGAGTATTGTTTCACATTCAGCGAAAAATGTCCTCGCTTTGCAGACATTTA
 
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rJMSF014I14+          ACCAAACTTTATGGCGGTTTGGATATTTTTAATCGAATGTGGAACATTTCAAAAGTATAA
rJMFF023N22+          ACCAAACTTTATGGCGGTTTGGATATTTTTAATCGAATGTGGAACATTTCAAAAGTATAA
                      ____________________________________________________________
consensus             ACCAAACTTTATGGCGGTTTGGATATTTTTAATCGAATGTGGAACATTTCAAAAGTATAA
 
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rJMSF014I14+          ATGTGTCAAAATTGAGAGTCAAAAATTCGGTCTGAACTTGTAACGATATTTGATGGATCA
rJMFF023N22+          ATGTGTCAAAATTGAGAGTCAAAAATTCGGTCTGAACTTGTAACGATATTTGATGGATCA
                      ____________________________________________________________
consensus             ATGTGTCAAAATTGAGAGTCAAAAATTCGGTCTGAACTTGTAACGATATTTGATGGATCA
 
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rJMSF014I14+          AAGGTGAAATTAACTCTGTTCCTGAAAATACTGGTATTTG                    
rJMFF023N22+          AAGGTGAAATTAACTCTGTTCCTGAAAATACTGGTATTTGTGTTCCATATGAATAATAAT
                      ____________________________________________________________
consensus             AAGGTGAAATTAACTCTGTTCCTGAAAATACTGGTATTTGTGTTCCATATGAATAATAAT