Contig 001107:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021N21Sequence567010672 (2)gb|KDO80637.1|3e-78hypothetical protein CISIN_1g009233mg [Citrus sinensis]746001107 (2)ref|XP_009627331.1|7e-63PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Nicotiana tomentosif
JMSF020G10Sequence281010672 (2)ref|XP_009774511.1|4e-10PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Nicotiana sylvestris728001107 (2)ref|XP_009627331.1|3e-68PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Nicotiana tomentosif

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF020G10+ ATCAAAGCCAGGCAAACTGGAGGGGCAGAGTACGAAGCAGT
rJMFF021N21+ AACTGGAGGGGCAGAGTACGAAGCAGT
                      ____________________________________________________________
consensus ATCAAAGCCAGGCAAACTGGAGGGGCAGAGTACGAAGCAGT
 
. : . : . : . : . : . :
rJMSF020G10+ GTTCTACACACCTTCACCAACTACATGTGTGTTTGCCTTCATCCAGGAAGAAGACTAGGT
rJMFF021N21+ GTTCTACACACNTTCACCAACTACATGTGTGTTTGCCTTCATCCAGGAAGAAGACTAGGT
                      ____________________________________________________________
consensus GTTCTACACACCTTCACCAACTACATGTGTGTTTGCCTTCATCCAGGAAGAAGACTAGGT
 
. : . : . : . : . : . :
rJMSF020G10+ TATTATACAGGATGTCACTGGATTTTGCTCCCCTGCTCAAACACATTCCCTTCATGCAAT
rJMFF021N21+ TATTATACAGGGTGTCACTGGATTTTGCTCCCCTGCTCAAACACATTCCCTTCATGCAAT
                      ____________________________________________________________
consensus TATTATACAGGGTGTCACTGGATTTTGCTCCCCTGCTCAAACACATTCCCTTCATGCAAT
 
. : . : . : . : . : . :
rJMSF020G10+ ATTTGTGGAGGCACTTTGCAGAGCAGGTCTTAAATGAGGATCTGCGGCTTGTAATTGGGC
rJMFF021N21+ ATTTGTGGAGGCACTTTGCAGAGCAGGTCTTAAATGAGGATCTGCGGCTTGTAATTGGGC
                      ____________________________________________________________
consensus ATTTGTGGAGGCACTTTGCAGAGCAGGTCTTAAATGAGGATCTGCGGCTTGTAATTGGGC
 
. : . : . : . : . : . :
rJMSF020G10+ AACAGGACCGGATGATCAATGGCGCTAACATCTGGAATCTTCCCGTGGCTTATGATAAGC
rJMFF021N21+ AACAGGACCGGATGATCAATGGCGCTAACATCTGGAATCTTCCCGTGGCTTATGATAAGC
                      ____________________________________________________________
consensus AACAGGACCGGATGATCAATGGCGCTAACATCTGGAATCTTCCCGTGGCTTATGATAAGC
 
. : . : . : . : . : . :
rJMSF020G10+ TAGGAGTAAGGTATAGGATTTGGAGGGATGCTGTAGAACGAGGAACTAAACAATTACCTT
rJMFF021N21+ TAGGAGTAAGGTATAGGATTTGGAGGGATGCTGTAGAACGAGGAACTAAACAATTACCTT
                      ____________________________________________________________
consensus TAGGAGTAAGGTATAGGATTTGGAGGGATGCTGTAGAACGAGGAACTAAACAATTACCTT
 
. : . : . : . : . : . :
rJMSF020G10+ TCAGCGAATGAGCATTCAACGAAAGTCAATAACGGGTTACCTCCTTTCATGTTACTTCTG
rJMFF021N21+ TCAGCGAATGAGCATTCAACGAAAGCCAATAACGGGTTACCTCCTTTCATGTTACTTCTG
                      ____________________________________________________________
consensus TCAGCGAATGAGCATTCAACGAAAGTCAATAACGGGTTACCTCCTTTCATGTTACTTCTG
 
. : . : . : . : . : . :
rJMSF020G10+ AACTTCACCTCAACAAGGAGCTATAGTTGTCTTCCAGCATACTTCAGGGACTACGTCCAA
rJMFF021N21+ AACTTCACCTCAACAAGGAGCTATAGTTGTCTTCCAGCATACTTCAGGGACTACGTCCAA
                      ____________________________________________________________
consensus AACTTCACCTCAACAAGGAGCTATAGTTGTCTTCCAGCATACTTCAGGGACTACGTCCAA
 
. : . : . : . : . : . :
rJMSF020G10+ ATTTGGACAAAGTACCCGTTTTTCAAGACGAAGTAACAGAGCGTTCAGCTANTAATTCAT
rJMFF021N21+ ATTTGGACAAAGTACCCGTTTTTCAAGACGAAGTAACAGAGCGTTCAGCTACTAATTCAT
                      ____________________________________________________________
consensus ATTTGGACAAAGTACCCGTTTTTCAAGACGAAGTAACAGAGCGTTCAGCTACTAATTCAT
 
. : . : . : . : . : . :
rJMSF020G10+ GGCAAATTAAAGGACAATGGCTTCTGCATCAACCACTTTGCAAAATTATAAGTTCTCCGC
rJMFF021N21+ GGCAAATTAAAGGACAATGGCTTCTGCATCAACCACTTTGCAAAATTATAAGTTCTCCGC
                      ____________________________________________________________
consensus GGCAAATTAAAGGACAATGGCTTCTGCATCAACCACTTTGCAAAATTATAAGTTCTCCGC
 
. : . : . : . : . : . :
rJMSF020G10+ CAAGTTGGTTGGTAGTTTTTTTCTTTTTCATTTTTCTTTGTACAGTTTTGAACAACTTAT
rJMFF021N21+ CAAGTTGGTTGGTAGTTTTTTTCTTTTTCATTTTTCTTTGTACAGTTTTGAACAACTTAT
                      ____________________________________________________________
consensus CAAGTTGGTTGGTAGTTTTTTTCTTTTTCATTTTTCTTTGTACAGTTTTGAACAACTTAT
 
. : . : . : . : . : . :
rJMSF020G10+ ATCCCACTTTCCCCATTGGTTGTATTCACCCAACACTGCTTACAAAGTTGAAGATTACTT
rJMFF021N21+ ATCCCACTTTCCCCATTGGTTGTATTCACCCAACACTGCTTACAAAGTTGAAGATTACTT
                      ____________________________________________________________
consensus ATCCCACTTTCCCCATTGGTTGTATTCACCCAACACTGCTTACAAAGTTGAAGATTACTT
 
. : . : . : . : . : . :
rJMSF020G10+ AACTAGGCTCAAAACTGCCCAGCTTCA
rJMFF021N21+ -ACTAGGCTCAAAACTGCCCAGCTTCATATGTAATGCAGGGTAGAATGGTTAATGACAAT
                      ____________________________________________________________
consensus AACTAGGCTCAAAACTGCCCAGCTTCATATGTAATGCAGGGTAGAATGGTTAATGACAAT