clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF020M16 | Sequence | 572 | 006560 (5) | ref|XP_006362660.1| | 5e-21 | PREDICTED: uncharacterized protein At3g49140-like [Solanum tuberosum] | 761 | 001100 (5) | ref|XP_009604136.1| | 7e-91 | PREDICTED: uncharacterized protein At3g49140-like isoform X2 [Nicotiana tomento |
JMSF026O10 | Sequence | 654 | 006560 (5) | ref|XP_006362660.1| | 4e-58 | PREDICTED: uncharacterized protein At3g49140-like [Solanum tuberosum] | 758 | 001100 (5) | ref|XP_009604136.1| | 1e-96 | PREDICTED: uncharacterized protein At3g49140-like isoform X2 [Nicotiana tomento |
JMSF028G04 | Sequence | 656 | 006560 (5) | emb|CDP05133.1| | 4e-36 | unnamed protein product [Coffea canephora] | 725 | 001100 (5) | ref|XP_009604135.1| | 5e-95 | PREDICTED: uncharacterized protein At3g49140-like isoform X1 [Nicotiana tomento |
JMSF031H05 | Sequence | 573 | 006560 (5) | ref|XP_006362660.1| | 7e-13 | PREDICTED: uncharacterized protein At3g49140-like [Solanum tuberosum] | 667 | 001100 (5) | ref|XP_009604136.1| | 2e-87 | PREDICTED: uncharacterized protein At3g49140-like isoform X2 [Nicotiana tomento |
JMSF039D08 | Sequence | 645 | 006560 (5) | ref|XP_006362660.1| | 1e-50 | PREDICTED: uncharacterized protein At3g49140-like [Solanum tuberosum] | 914 | 001100 (5) | ref|XP_009604136.1| | 2e-130 | PREDICTED: uncharacterized protein At3g49140-like isoform X2 [Nicotiana tomento |
This contig is upended
. : . : . : . : . : . :
rJMSF039D08+ ATACAATGCGATCTTCTCATCCCATGCATTTTGCCAGAAGGCTTACTGAGG
____________________________________________________________
consensus ATACAATGCGATCTTCTCATCCCATGCATTTTGCCAGAAGGCTTACTGAGG
. : . : . : . : . : . :
rJMSF039D08+ TTGNTGATGATGATCCTATAGATTTCATGGAACTGCCTCCAGCAGGCCTTGCAATACAAG
____________________________________________________________
consensus TTGNTGATGATGATCCTATAGATTTCATGGAACTGCCTCCAGCAGGCCTTGCAATACAAG
. : . : . : . : . : . :
rJMSF028G04+ AAGCAGATGTCTGACC
rJMSF026O10+ AAGCAGATGTCTGACC
rJMSF039D08+ GCATTCTAAGGCCAGCCTTCCTTGAAGAACATGTTGTCATCCAAAAGCAGATGTCTGACC
____________________________________________________________
consensus GCATTCTAAGGCCAGCCTTCCTTGAAGAACATGTTGTCATCCAAAAGCAGATGTCTGACC
. : . : . : . : . : . :
rJMSF028G04+ ACAAAACCAGTAATGCTGATCGGAATCAGATTTCAAAAGCTGCAGATTGCAAAGAAACAA
rJMSF026O10+ ACAAAACCAGTAATGCTGATCGGAATCAGATTTCAAAAGCTGCAGATTGCAAAGAAACAA
rJMSF039D08+ ACAAAACCAGTAATGCTGATCGGAATCAGATTTCAAAAGCTGCAGATTGCAAAGAAACAA
rJMFF020M16+ TCGGAATCAGATTTCAAAAGCTGCAGATTGCAAAGAAACAA
____________________________________________________________
consensus ACAAAACCAGTAATGCTGATCGGAATCAGATTTCAAAAGCTGCAGATTGCAAAGAAACAA
. : . : . : . : . : . :
rJMSF028G04+ CTATTGTTCCGATAAATGGTCACAGACACAAAAGTGGATTAGATCAAGATAACCCAAACG
rJMSF026O10+ CTATTGTTCCGATAAATGGTCACAGACACAAAAGTGGATTAGATCAAGATAACCCAAACT
rJMSF039D08+ CTATTGTTCCGATAAATGGTCACAGACACAAAAGTGGATTAGATCAAGATAACCCAAACT
rJMSF031H05+ GTTCCGATAAATGGTCACAGACACAAAAGTGGATTAGATCAAGATAACCCAAACT
rJMFF020M16+ CTATTGTTCCGATAAATGGTCACAGACACAAAAGTGGATTAGATCAAGATAACCCAAACT
____________________________________________________________
consensus CTATTGTTCCGATAAATGGTCACAGACACAAAAGTGGATTAGATCAAGATAACCCAAACT
. : . : . : . : . : . :
rJMSF028G04+ GGGCAGAGGAATTAGAAAAGGATGAAACCCTTGGAAGTGGAACCTCATTTTACAAGCTAG
rJMSF026O10+ GGGCAGAGGAATTAGAAAAGGATGAAACCCTTGGAAGTGGAACCTCATTTTACAAGCTAG
rJMSF039D08+ GGGCAGAGGAATTAGAAAAGGATGAAACCCTTGGAAGTGGAACCTCATTTTACAAGCTAG
rJMSF031H05+ GGGCAGAGGAATTAGAAAAGGATGAAACCCTTGGAAGTGGAACCTCATTTTACAAGCTAG
rJMFF020M16+ GGGCAGAGGAATTAGAAAAGGATGAAACCCTTGGAAGTGGAACCTCATTTTACAAGCTAG
____________________________________________________________
consensus GGGCAGAGGAATTAGAAAAGGATGAAACCCTTGGAAGTGGAACCTCATTTTACAAGCTAG
. : . : . : . : . : . :
rJMSF028G04+ AAATGATCAAGATCCAGTTAATTTCTGCTCATGGAAATCAGACTTTTGTTGAAATAGAAG
rJMSF026O10+ AAATGATCAAGATCCAGTTAATTTCTGCTCATGGAAATCAGACTTTTGTTGAAATAGAAG
rJMSF039D08+ AAATGATCAAGATCCAGTTAATTTCTGCTCATGGAAATCAGACTTTTGTTGAAATAGAAG
rJMSF031H05+ AAATGATCAAGATCCAGTTAATTTCTGCTCATGGAAATCAGACTTTTGTTGAAATAGAAG
rJMFF020M16+ AAATGATCAAGATCCAGTTAATTTCTGCTCATGGAAATCAGACTTTTGTTGAAATAGAAG
____________________________________________________________
consensus AAATGATCAAGATCCAGTTAATTTCTGCTCATGGAAATCAGACTTTTGTTGAAATAGAAG
. : . : . : . : . : . :
rJMSF028G04+ ATTTTAGGAGAGCTCGGGCTGATGCAATTGCACACTCAGCTGTAAAAATCTTGTCCCGTC
rJMSF026O10+ ATTTTAGGAGAGCTCGGGCTGATGCAATTGCACACTCAGCTGTAAAAATCTTGTCCCGTC
rJMSF039D08+ ATTTTAGGAGAGCTCGGGCTGATGCAATTGCACACTCAGCTGTAAAAATCTTGTCCCGTC
rJMSF031H05+ ATTTTAGGAGAGCTCGGGCTGATGCAATTGCACACTCAGCTGTAAAAATCTTGTCCCGTC
rJMFF020M16+ ATTTTAGGAGAGCTCGGGCTGATGCAATTGCACACTCAGCTGTAAAAATCTTGTCCCGTC
____________________________________________________________
consensus ATTTTAGGAGAGCTCGGGCTGATGCAATTGCACACTCAGCTGTAAAAATCTTGTCCCGTC
. : . : . : . : . : . :
rJMSF028G04+ TTAAAACCAGTGGAGAAAAGACCATTCAAGCTCTCAAATCCCTCTGCTGGAGATGCAAGG
rJMSF026O10+ TTAAAACCAGTGGAGAAAAGACCATTCAAGCTCTCAAATCCCTCTGCTGGAGATGCAAGG
rJMSF039D08+ TTAAAACCAGTGGAGAAAAGACCATTCAAGCTCTCAAATCCCTCTGCTGGAGATGCAAGG
rJMSF031H05+ TTAAAACCAGTGGAGAAAAGACCATTCAAGCTCTCAAATCCCTCTGCTGGAGATGCAAGG
rJMFF020M16+ TTAAAACCAGTGGAGAAAAGACCATTCAAGCTCTCAAATCCCTCTGCTGGAGATGCAAGG
____________________________________________________________
consensus TTAAAACCAGTGGAGAAAAGACCATTCAAGCTCTCAAATCCCTCTGCTGGAGATGCAAGG
. : . : . : . : . : . :
rJMSF028G04+ GTATCCAAGTAGAGGAAGTATCTCTGATAGGTGTCGATAGCCTTGGTATTGATCTAAGAG
rJMSF026O10+ GTATCCAAGTAGAGGAAGTATCTCTGATAGGTGTCGATAGCCTTGGTATTGATCTAAGAG
rJMSF039D08+ GTATCCAAGTAGAGGAAGTATCTCTGATAGGTGTCGATAGCCTTGGTATTGATCTAAGAG
rJMSF031H05+ GTATCCAAGTAGAGGAAGTATCTCTGATAGGTGTCGATAGCCTTGGTATTGATCTAAGAG
rJMFF020M16+ GTATCCAAGTAGAGGAAGTATCTCTGATAGGTGTCGATAGCCTTGGTATTGATCTAAGAG
____________________________________________________________
consensus GTATCCAAGTAGAGGAAGTATCTCTGATAGGTGTCGATAGCCTTGGTATTGATCTAAGAG
. : . : . : . : . : . :
rJMSF028G04+ TTTGCTCTGGAACACAAGTCCAAACATTACGCTTTGCATTTAAAAAACGGGCATCCTCAG
rJMSF026O10+ TTTGCTCTGGAACACAAGTCCAAACATTACGCTTTGCATTTAAAAAACGGGCATCCTCAG
rJMSF039D08+ TTTGCTCTGGAACACAAGTCCAAACATTACGCTTTGCATTTAAAAAACGGGCATCCTCAG
rJMSF031H05+ TTTGCTCTGGAACACAAGTCCAAACATTACGCTTTGCATTTAAAAAACGGGCATCCTCAG
rJMFF020M16+ TTTGCTCTGGAACACAAGTCCAAACATTACGCTTTGCATTTAAAAAACGGGCATCCTCAG
____________________________________________________________
consensus TTTGCTCTGGAACACAAGTCCAAACATTACGCTTTGCATTTAAAAAACGGGCATCCTCAG
. : . : . : . : . : . :
rJMSF028G04+ AGTATAGTGCTGAAAGACAACTGAACAATCTACTATTCCCAAGGACCCAAAAATTGCAAC
rJMSF026O10+ AGTATAGTGCTGAAAGACAACTGAACAATCTACTATTCCCAAGGACCCAAAAATTGCAAC
rJMSF039D08+ AGTATAGTGCTGAAAGACAACTGAACAATCTACTATTCCCAAGGACCCAAAAATTGCGAC
rJMSF031H05+ AGTATAGTGCTGAAAGACGACTGAACAATCTACTATTCCCAAGGACCCAAAAATTGCAAC
rJMFF020M16+ AGTATAGTGCTGAAAGACAACTGAACAATCTACTATTCCCAAGGACCCAAAAATTGCAAC
____________________________________________________________
consensus AGTATAGTGCTGAAAGACAACTGAACAATCTACTATTCCCAAGGACCCAAAAATTGCAAC
. : . : . : . : . : . :
rJMSF028G04+ AGAGGAAAGAAGCTCAGCAAGCTGAATCTTAACTTCTAGTTGCCACTGTGACTGTGTATT
rJMSF026O10+ AGAGGAAAGAAGCTCAGCAAGCTGAATCTTAACTTCTAGTTGCCACTGTGACTGTGTATT
rJMSF039D08+ AGAGGAAAGAAGCTCAGCAAGCTGAATCTTAACTTCTAGTTGCCACTGTGACTGTGTATT
rJMSF031H05+ AGAGGAAAGAAGCTCAGCAAGCTGAATCTTAACTTCTAGTTGCCACTGTGACTGTGTATT
rJMFF020M16+ AGAGGAAAGAAGCTCAGCAAGCTGAATCTTAACTTCTAGTTGCCACTGTGACTGTGTATT
____________________________________________________________
consensus AGAGGAAAGAAGCTCAGCAAGCTGAATCTTAACTTCTAGTTGCCACTGTGACTGTGTATT
. : . : . : . : . : . :
rJMSF028G04+ ATTATGTTGTACTCTTGGCTCTGAACTGTACAGTACATACTACATAGCACCAAGAGGCTT
rJMSF026O10+ ATTATGTTGTACTCTTGGCTCTGAACTGTACAGTACATACTACATAGCACCAAGAGGCTT
rJMSF039D08+ ATTATGTTGTACTCTTGGCTCTGAACTGTACAGTACATACTACATAGCACCAAGAGGCTT
rJMSF031H05+ ATTATGTTGTACTCTTGGCTCTGAACTGTACAGTACATACTACATAGCACCAAGAGGCTT
rJMFF020M16+ ATTATGTTGTACTCTTGGCTCTGAACTGTACAGTACATACTACATAGCACCAAGAGGCTT
____________________________________________________________
consensus ATTATGTTGTACTCTTGGCTCTGAACTGTACAGTACATACTACATAGCACCAAGAGGCTT
. : . : . : . : . : . :
rJMSF028G04+ TACCCCATTCCAGTTTATTTACTGTTACCCAACAAGCCTTAATTATTAT
rJMSF026O10+ TACCCCATTCCAGTTTATTTACTGTTACCCAACAAGCCTTAATTATTATTTAAGTTAGTT
rJMSF039D08+ TACCCCATTCCAGTTTATTTACTGTTACCCAACAAGCCTTAATTATTATTTAAGTTAGTT
rJMSF031H05+ TACCCCATTCCAGTTTATTTACTGTTACCCAACAAGCCTTAATTATTATTTAAGTTAGTT
rJMFF020M16+ TACCCCATTCCAGTTTATTTACTGTTACCCAACAAGCCTTAATTATTATTTAAGTTAGTT
____________________________________________________________
consensus TACCCCATTCCAGTTTATTTACTGTTACCCAACAAGCCTTAATTATTATTTAAGTTAGTT
. : . : . : . : . : . :
rJMSF026O10+ CTTTGTAAC
rJMSF039D08+ CTTTGTAAC
rJMSF031H05+ CTT
rJMFF020M16+ CTTTGTAACACTATGTATGTTCCTTTGTGACCTTAAATGTACAGCTTAATTCAGTAGCCG
____________________________________________________________
consensus CTTTGTAACACTATGTATGTTCCTTTGTGACCTTAAATGTACAGCTTAATTCAGTAGCCG