Contig 001100:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020M16Sequence572006560 (5)ref|XP_006362660.1|5e-21PREDICTED: uncharacterized protein At3g49140-like [Solanum tuberosum]761001100 (5)ref|XP_009604136.1|7e-91PREDICTED: uncharacterized protein At3g49140-like isoform X2 [Nicotiana tomento
JMSF026O10Sequence654006560 (5)ref|XP_006362660.1|4e-58PREDICTED: uncharacterized protein At3g49140-like [Solanum tuberosum]758001100 (5)ref|XP_009604136.1|1e-96PREDICTED: uncharacterized protein At3g49140-like isoform X2 [Nicotiana tomento
JMSF028G04Sequence656006560 (5)emb|CDP05133.1|4e-36unnamed protein product [Coffea canephora]725001100 (5)ref|XP_009604135.1|5e-95PREDICTED: uncharacterized protein At3g49140-like isoform X1 [Nicotiana tomento
JMSF031H05Sequence573006560 (5)ref|XP_006362660.1|7e-13PREDICTED: uncharacterized protein At3g49140-like [Solanum tuberosum]667001100 (5)ref|XP_009604136.1|2e-87PREDICTED: uncharacterized protein At3g49140-like isoform X2 [Nicotiana tomento
JMSF039D08Sequence645006560 (5)ref|XP_006362660.1|1e-50PREDICTED: uncharacterized protein At3g49140-like [Solanum tuberosum]914001100 (5)ref|XP_009604136.1|2e-130PREDICTED: uncharacterized protein At3g49140-like isoform X2 [Nicotiana tomento

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF039D08+ ATACAATGCGATCTTCTCATCCCATGCATTTTGCCAGAAGGCTTACTGAGG
                      ____________________________________________________________
consensus ATACAATGCGATCTTCTCATCCCATGCATTTTGCCAGAAGGCTTACTGAGG
 
. : . : . : . : . : . :
rJMSF039D08+ TTGNTGATGATGATCCTATAGATTTCATGGAACTGCCTCCAGCAGGCCTTGCAATACAAG
                      ____________________________________________________________
consensus TTGNTGATGATGATCCTATAGATTTCATGGAACTGCCTCCAGCAGGCCTTGCAATACAAG
 
. : . : . : . : . : . :
rJMSF028G04+ AAGCAGATGTCTGACC
rJMSF026O10+ AAGCAGATGTCTGACC
rJMSF039D08+ GCATTCTAAGGCCAGCCTTCCTTGAAGAACATGTTGTCATCCAAAAGCAGATGTCTGACC
                      ____________________________________________________________
consensus GCATTCTAAGGCCAGCCTTCCTTGAAGAACATGTTGTCATCCAAAAGCAGATGTCTGACC
 
. : . : . : . : . : . :
rJMSF028G04+ ACAAAACCAGTAATGCTGATCGGAATCAGATTTCAAAAGCTGCAGATTGCAAAGAAACAA
rJMSF026O10+ ACAAAACCAGTAATGCTGATCGGAATCAGATTTCAAAAGCTGCAGATTGCAAAGAAACAA
rJMSF039D08+ ACAAAACCAGTAATGCTGATCGGAATCAGATTTCAAAAGCTGCAGATTGCAAAGAAACAA
rJMFF020M16+ TCGGAATCAGATTTCAAAAGCTGCAGATTGCAAAGAAACAA
                      ____________________________________________________________
consensus ACAAAACCAGTAATGCTGATCGGAATCAGATTTCAAAAGCTGCAGATTGCAAAGAAACAA
 
. : . : . : . : . : . :
rJMSF028G04+ CTATTGTTCCGATAAATGGTCACAGACACAAAAGTGGATTAGATCAAGATAACCCAAACG
rJMSF026O10+ CTATTGTTCCGATAAATGGTCACAGACACAAAAGTGGATTAGATCAAGATAACCCAAACT
rJMSF039D08+ CTATTGTTCCGATAAATGGTCACAGACACAAAAGTGGATTAGATCAAGATAACCCAAACT
rJMSF031H05+ GTTCCGATAAATGGTCACAGACACAAAAGTGGATTAGATCAAGATAACCCAAACT
rJMFF020M16+ CTATTGTTCCGATAAATGGTCACAGACACAAAAGTGGATTAGATCAAGATAACCCAAACT
                      ____________________________________________________________
consensus CTATTGTTCCGATAAATGGTCACAGACACAAAAGTGGATTAGATCAAGATAACCCAAACT
 
. : . : . : . : . : . :
rJMSF028G04+ GGGCAGAGGAATTAGAAAAGGATGAAACCCTTGGAAGTGGAACCTCATTTTACAAGCTAG
rJMSF026O10+ GGGCAGAGGAATTAGAAAAGGATGAAACCCTTGGAAGTGGAACCTCATTTTACAAGCTAG
rJMSF039D08+ GGGCAGAGGAATTAGAAAAGGATGAAACCCTTGGAAGTGGAACCTCATTTTACAAGCTAG
rJMSF031H05+ GGGCAGAGGAATTAGAAAAGGATGAAACCCTTGGAAGTGGAACCTCATTTTACAAGCTAG
rJMFF020M16+ GGGCAGAGGAATTAGAAAAGGATGAAACCCTTGGAAGTGGAACCTCATTTTACAAGCTAG
                      ____________________________________________________________
consensus GGGCAGAGGAATTAGAAAAGGATGAAACCCTTGGAAGTGGAACCTCATTTTACAAGCTAG
 
. : . : . : . : . : . :
rJMSF028G04+ AAATGATCAAGATCCAGTTAATTTCTGCTCATGGAAATCAGACTTTTGTTGAAATAGAAG
rJMSF026O10+ AAATGATCAAGATCCAGTTAATTTCTGCTCATGGAAATCAGACTTTTGTTGAAATAGAAG
rJMSF039D08+ AAATGATCAAGATCCAGTTAATTTCTGCTCATGGAAATCAGACTTTTGTTGAAATAGAAG
rJMSF031H05+ AAATGATCAAGATCCAGTTAATTTCTGCTCATGGAAATCAGACTTTTGTTGAAATAGAAG
rJMFF020M16+ AAATGATCAAGATCCAGTTAATTTCTGCTCATGGAAATCAGACTTTTGTTGAAATAGAAG
                      ____________________________________________________________
consensus AAATGATCAAGATCCAGTTAATTTCTGCTCATGGAAATCAGACTTTTGTTGAAATAGAAG
 
. : . : . : . : . : . :
rJMSF028G04+ ATTTTAGGAGAGCTCGGGCTGATGCAATTGCACACTCAGCTGTAAAAATCTTGTCCCGTC
rJMSF026O10+ ATTTTAGGAGAGCTCGGGCTGATGCAATTGCACACTCAGCTGTAAAAATCTTGTCCCGTC
rJMSF039D08+ ATTTTAGGAGAGCTCGGGCTGATGCAATTGCACACTCAGCTGTAAAAATCTTGTCCCGTC
rJMSF031H05+ ATTTTAGGAGAGCTCGGGCTGATGCAATTGCACACTCAGCTGTAAAAATCTTGTCCCGTC
rJMFF020M16+ ATTTTAGGAGAGCTCGGGCTGATGCAATTGCACACTCAGCTGTAAAAATCTTGTCCCGTC
                      ____________________________________________________________
consensus ATTTTAGGAGAGCTCGGGCTGATGCAATTGCACACTCAGCTGTAAAAATCTTGTCCCGTC
 
. : . : . : . : . : . :
rJMSF028G04+ TTAAAACCAGTGGAGAAAAGACCATTCAAGCTCTCAAATCCCTCTGCTGGAGATGCAAGG
rJMSF026O10+ TTAAAACCAGTGGAGAAAAGACCATTCAAGCTCTCAAATCCCTCTGCTGGAGATGCAAGG
rJMSF039D08+ TTAAAACCAGTGGAGAAAAGACCATTCAAGCTCTCAAATCCCTCTGCTGGAGATGCAAGG
rJMSF031H05+ TTAAAACCAGTGGAGAAAAGACCATTCAAGCTCTCAAATCCCTCTGCTGGAGATGCAAGG
rJMFF020M16+ TTAAAACCAGTGGAGAAAAGACCATTCAAGCTCTCAAATCCCTCTGCTGGAGATGCAAGG
                      ____________________________________________________________
consensus TTAAAACCAGTGGAGAAAAGACCATTCAAGCTCTCAAATCCCTCTGCTGGAGATGCAAGG
 
. : . : . : . : . : . :
rJMSF028G04+ GTATCCAAGTAGAGGAAGTATCTCTGATAGGTGTCGATAGCCTTGGTATTGATCTAAGAG
rJMSF026O10+ GTATCCAAGTAGAGGAAGTATCTCTGATAGGTGTCGATAGCCTTGGTATTGATCTAAGAG
rJMSF039D08+ GTATCCAAGTAGAGGAAGTATCTCTGATAGGTGTCGATAGCCTTGGTATTGATCTAAGAG
rJMSF031H05+ GTATCCAAGTAGAGGAAGTATCTCTGATAGGTGTCGATAGCCTTGGTATTGATCTAAGAG
rJMFF020M16+ GTATCCAAGTAGAGGAAGTATCTCTGATAGGTGTCGATAGCCTTGGTATTGATCTAAGAG
                      ____________________________________________________________
consensus GTATCCAAGTAGAGGAAGTATCTCTGATAGGTGTCGATAGCCTTGGTATTGATCTAAGAG
 
. : . : . : . : . : . :
rJMSF028G04+ TTTGCTCTGGAACACAAGTCCAAACATTACGCTTTGCATTTAAAAAACGGGCATCCTCAG
rJMSF026O10+ TTTGCTCTGGAACACAAGTCCAAACATTACGCTTTGCATTTAAAAAACGGGCATCCTCAG
rJMSF039D08+ TTTGCTCTGGAACACAAGTCCAAACATTACGCTTTGCATTTAAAAAACGGGCATCCTCAG
rJMSF031H05+ TTTGCTCTGGAACACAAGTCCAAACATTACGCTTTGCATTTAAAAAACGGGCATCCTCAG
rJMFF020M16+ TTTGCTCTGGAACACAAGTCCAAACATTACGCTTTGCATTTAAAAAACGGGCATCCTCAG
                      ____________________________________________________________
consensus TTTGCTCTGGAACACAAGTCCAAACATTACGCTTTGCATTTAAAAAACGGGCATCCTCAG
 
. : . : . : . : . : . :
rJMSF028G04+ AGTATAGTGCTGAAAGACAACTGAACAATCTACTATTCCCAAGGACCCAAAAATTGCAAC
rJMSF026O10+ AGTATAGTGCTGAAAGACAACTGAACAATCTACTATTCCCAAGGACCCAAAAATTGCAAC
rJMSF039D08+ AGTATAGTGCTGAAAGACAACTGAACAATCTACTATTCCCAAGGACCCAAAAATTGCGAC
rJMSF031H05+ AGTATAGTGCTGAAAGACGACTGAACAATCTACTATTCCCAAGGACCCAAAAATTGCAAC
rJMFF020M16+ AGTATAGTGCTGAAAGACAACTGAACAATCTACTATTCCCAAGGACCCAAAAATTGCAAC
                      ____________________________________________________________
consensus AGTATAGTGCTGAAAGACAACTGAACAATCTACTATTCCCAAGGACCCAAAAATTGCAAC
 
. : . : . : . : . : . :
rJMSF028G04+ AGAGGAAAGAAGCTCAGCAAGCTGAATCTTAACTTCTAGTTGCCACTGTGACTGTGTATT
rJMSF026O10+ AGAGGAAAGAAGCTCAGCAAGCTGAATCTTAACTTCTAGTTGCCACTGTGACTGTGTATT
rJMSF039D08+ AGAGGAAAGAAGCTCAGCAAGCTGAATCTTAACTTCTAGTTGCCACTGTGACTGTGTATT
rJMSF031H05+ AGAGGAAAGAAGCTCAGCAAGCTGAATCTTAACTTCTAGTTGCCACTGTGACTGTGTATT
rJMFF020M16+ AGAGGAAAGAAGCTCAGCAAGCTGAATCTTAACTTCTAGTTGCCACTGTGACTGTGTATT
                      ____________________________________________________________
consensus AGAGGAAAGAAGCTCAGCAAGCTGAATCTTAACTTCTAGTTGCCACTGTGACTGTGTATT
 
. : . : . : . : . : . :
rJMSF028G04+ ATTATGTTGTACTCTTGGCTCTGAACTGTACAGTACATACTACATAGCACCAAGAGGCTT
rJMSF026O10+ ATTATGTTGTACTCTTGGCTCTGAACTGTACAGTACATACTACATAGCACCAAGAGGCTT
rJMSF039D08+ ATTATGTTGTACTCTTGGCTCTGAACTGTACAGTACATACTACATAGCACCAAGAGGCTT
rJMSF031H05+ ATTATGTTGTACTCTTGGCTCTGAACTGTACAGTACATACTACATAGCACCAAGAGGCTT
rJMFF020M16+ ATTATGTTGTACTCTTGGCTCTGAACTGTACAGTACATACTACATAGCACCAAGAGGCTT
                      ____________________________________________________________
consensus ATTATGTTGTACTCTTGGCTCTGAACTGTACAGTACATACTACATAGCACCAAGAGGCTT
 
. : . : . : . : . : . :
rJMSF028G04+ TACCCCATTCCAGTTTATTTACTGTTACCCAACAAGCCTTAATTATTAT
rJMSF026O10+ TACCCCATTCCAGTTTATTTACTGTTACCCAACAAGCCTTAATTATTATTTAAGTTAGTT
rJMSF039D08+ TACCCCATTCCAGTTTATTTACTGTTACCCAACAAGCCTTAATTATTATTTAAGTTAGTT
rJMSF031H05+ TACCCCATTCCAGTTTATTTACTGTTACCCAACAAGCCTTAATTATTATTTAAGTTAGTT
rJMFF020M16+ TACCCCATTCCAGTTTATTTACTGTTACCCAACAAGCCTTAATTATTATTTAAGTTAGTT
                      ____________________________________________________________
consensus TACCCCATTCCAGTTTATTTACTGTTACCCAACAAGCCTTAATTATTATTTAAGTTAGTT
 
. : . : . : . : . : . :
rJMSF026O10+ CTTTGTAAC
rJMSF039D08+ CTTTGTAAC
rJMSF031H05+ CTT
rJMFF020M16+ CTTTGTAACACTATGTATGTTCCTTTGTGACCTTAAATGTACAGCTTAATTCAGTAGCCG
                      ____________________________________________________________
consensus CTTTGTAACACTATGTATGTTCCTTTGTGACCTTAAATGTACAGCTTAATTCAGTAGCCG