Contig 001093:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018A12Sequence776001093 (8)ref|XP_009606082.1|2e-37PREDICTED: small ubiquitin-related modifier 2 [Nicotiana tomentosiformis]925001093 (8)ref|XP_010241411.1|9e-26PREDICTED: ubiquitin-like protein pmt3/smt3 isoform X1 [Nelumbo nucifera]
JMFF044A19Sequence637001093 (8)ref|XP_009606082.1|3e-38PREDICTED: small ubiquitin-related modifier 2 [Nicotiana tomentosiformis]620001093 (8)ref|XP_003552121.1|2e-22PREDICTED: small ubiquitin-related modifier 2-like [Glycine max] gb|KHN10571.1|
JMFS056E04Sequence634001093 (8)ref|XP_010241411.1|1e-40PREDICTED: ubiquitin-like protein pmt3/smt3 isoform X1 [Nelumbo nucifera]
JMFS088C12Sequence634001093 (8)ref|XP_010241411.1|2e-40PREDICTED: ubiquitin-like protein pmt3/smt3 isoform X1 [Nelumbo nucifera]
JMSF008A09Sequence191001093 (8)ref|XP_009606082.1|2e-11PREDICTED: small ubiquitin-related modifier 2 [Nicotiana tomentosiformis]829001093 (8)ref|XP_008230020.1|1e-26PREDICTED: small ubiquitin-related modifier 1-like [Prunus mume] ref|XP_00823002

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF044A19- GTCTGCTCACACTTTGCATTTGCAGTATATATAATCATACAAAAG
rJMSF008A09- AAAAG
rJMFF018A12- TTGCAGTATATATAATCATACAAAAG
                      ____________________________________________________________
consensus GTCTGCTCACACTTTGCATTTGCAGTATATATAATCATACAAAAG
 
. : . : . : . : . : . :
rJMFF044A19- AGTTCATTCAAAAGCAATTTCAACCCGCTGAGAGGGGACAGCTTACAGTCTACACTGGCA
rJMSF008A09- AGTTCATTCAAAAGCAATTTCAACCCGCTGAGAGGGGACAGCTTACAGTCTACACTGGCA
rJMFF018A12- AGTTCATTCAAAAGCAATTTCAACCCGCTGAGAGGGGACAGCTTACAGTCTACACTGGCA
                      ____________________________________________________________
consensus AGTTCATTCAAAAGCAATTTCAACCCGCTGAGAGGGGACAGCTTACAGTCTACACTGGCA
 
. : . : . : . : . : . :
rJMFF044A19- GTGAACAACTATCAGTAATACAGAAGAAGGTGAGTCTCATGGTTTTAGACAGCATTTCAT
rJMSF008A09- GTGAACAACTATCAGTAATACAGAAGAAGGTGAGTCTCATGGTTTTAGACAGCATTTCAT
rJMFF018A12- GTGAACAACTATCAGTAATACAGAAGAAGGTGAGTCTCATGGTTTTAGACAGCATTTCAT
                      ____________________________________________________________
consensus GTGAACAACTATCAGTAATACAGAAGAAGGTGAGTCTCATGGTTTTAGACAGCATTTCAT
 
. : . : . : . : . : . :
rJMFF044A19- ACCTGCTCTCTTGTAACATATGTAAATGATGTAAATAGTCATCTTCTCAGTGGATAAATG
rJMSF008A09- ACCTGCTCTCTTGTAACATATGTAAATGATGTAAATAGTCATCTTCTCAGTGGATAAATG
rJMFF018A12- ACCTGCTCTCTTGTAACATATGTAAATGATGTAAATAGTCATCTTCTCAGTGGATAAATG
                      ____________________________________________________________
consensus ACCTGCTCTCTTGTAACATATGTAAATGATGTAAATAGTCATCTTCTCAGTGGATAAATG
 
. : . : . : . : . : . :
rJMFF044A19- CATATATTCCTTTCCATTCTCAGTGGATTTTTTTTGGTAACATTGTATCAATCTCATCAC
rJMSF008A09- CATATATTCCTTTCCATTCTCAGTGGATTTTTTTTGGTAACATTGTATCAATCTCATCAC
JMFS056E04+ CATTGCATCAATCTCATCAC
JMFS088C12+ CATTGCATCAATCTCATCAC
JMFF044A19+ TCTCATCAC
JMFF018A12+ ATCAATNTCATCAC
rJMFF018A12- CATATATTCCTTTCCATTCTCAGTGGATTTTTTTTGGTAACATTGTATCAATCTCATCAC
                      ____________________________________________________________
consensus CATATATTCCTTTCCATTCTCAGTGGATTTTTTTTGGTAACATTGTATCAATCTCATCAC
 
. : . : . : . : . : . :
rJMFF044A19- CATCTTCCATCTCTAGCTCATCTGGAGTCTGCTCCCATCGAAGAAAGCGACCATGAAACA
rJMSF008A09- CATCTTCCATCTCTAGCTCATCTGGAGTCTGCTCCCATCGAAGAAAGCGACCATGAAACA
JMFS056E04+ CATCTTCCATCTCCAGCTCATCTGGAGTCTGCTCCCATCGAAGACGGCGACCATGAAACA
JMFS088C12+ CATCTTCCATCTCCAGCTCATCTGGAGTCTGCTCCCATCGAAGACGGCGACCATGAAACA
JMFF044A19+ CATCTTCCATCTCCAGCTCATCTGGAGTCTGCTCCCATCGAAGACGGCGACCATGAAACA
JMFF018A12+ CATNTTCCATCTCCAGCTCATCTGGAGTCTGCTCCCATCGAAGACGGCGACCATGAAACA
rJMFF018A12- CATCTTCCATCTCTAGCTCATCTGGAGTCTGCTCCCATCGAAGAAAGCGACCATGAAACA
                      ____________________________________________________________
consensus CATCTTCCATCTCCAGCTCATCTGGAGTCTGCTCCCATCGAAGACGGCGACCATGAAACA
 
. : . : . : . : . : . :
rJMFF044A19- GGAAAGCTGTTGAATTAAGATCCATTGATTTGTGATCACAGTATGATTTCATGAGTCTCT
JMSF008A09+ ACAGTACGATTTCATGAGTCTCT
rJMSF008A09- GGAAAGCTGTTGAATTAAGATCCATTGATTTGTGATCACAGTATGATTTCATGAGTCTCT
JMFS056E04+ GGAAAGCTGTTGAATTAAGATCCATTGATTTGCGATCGCAGTATGATTTCATGAGTCTCT
JMFS088C12+ GGAAAGCTGTTGAATTAAGATCCATTGATTTGCGATCGCAGTATGATTTCATGAGTCTCT
JMFF044A19+ GGAAAGCTGTTGAATTAAGATCCATTGATTTGCGATCGCAGTATGATTTCATGAGTCTCT
JMFF018A12+ GGAAAGCTGTTGAATTAAGATCCATTGATTTGCGATCGCAGTATGATTTCATGAGTCTCN
rJMFF018A12- GGAAAGCTGTTGAATTAAGATCCATTGATTTGTGATCACAGTATGATTTCATGAGTCTCT
                      ____________________________________________________________
consensus GGAAAGCTGTTGAATTAAGATCCATTGATTTGCGATCACAGTATGATTTCATGAGTCTCT
 
. : . : . : . : . : . :
rJMFF044A19- TCAGTCGGGTGCTTCTTTTCATCC-GAAAATCAGTTCCTCCCTTCGTCGTTTCTGTCCTT
JMSF008A09+ TCAGTCGGGTGCTTCTTTTCATCCTGAAAATCAGTTCCTCCCTTCGTCGTTTCTGTCCTC
rJMSF008A09- TCAGTCGGGTGCTTCTTTTCATCC-GAAAATCAGTTCCTCCCTTCGTCGTTTCTGTCCTT
JMFS056E04+ TCAGTCGGGTGCTTCTTTTCATCCTGAAAATCAGTTCCTCCCTTCGTCGTTTCTGTCCTT
JMFS088C12+ TCAGTCGGGTGCTTCTTTTCATCCTGAAAATCAGTTCCTCCCTTCGTCGTTTCTGTCCTT
JMFF044A19+ TCAGTCGGGTGCTTCTTTTCATCCTGAAAATCAGTTCCTCCCTTCGTCGTTTCTGTCCTT
JMFF018A12+ TCAGTCGGGTGCTTCTTTTCATCCTGAAAATCAGTTCCTCCNTTCGTCGTTTCTGTCCTT
rJMFF018A12- TCAGTCGGGTGCTTCTTTTCATCC-GAAAATCAGTTCCTCCCTTCGTCGTTTCTGTCCTT
                      ____________________________________________________________
consensus TCAGTCGGGTGCTTCTTTTCATCCTGAAAATCAGTTCCTCCCTTCGTCGTTTCTGTCCTT
 
. : . : . : . : . : . :
rJMFF044A19- TGACTTTAAGGTTGATATGAGCGGCCTGGTCGCCGCAGACGGGCATCTTGTCTTCCTCTG
JMSF008A09+ TGACTTTAAGGTTGATATGAGCGGCCAGATCGCCGCCGACGGGCATCTTGTCTTCCTCTG
rJMSF008A09- TGACTTTAAGGTTGATATGAGCGGCCTGGTCGCCGCAGACGGGCATCTTGTCTTCCTCTG
JMFS056E04+ TGACTTTAAGGTTGATATGAGTGGCCTGGTTGCTGCAGACGGACATCTTGTCTTCCTCTG
JMFS088C12+ TGACTTTAAGGTTGATATGAGTGGCCTGGTTGCTGCAGACGGACATCTTGTCTTCCTCTG
JMFF044A19+ TGACTTTAAGGTTGATATGAGTGGCCTGGTTGCTGCAGACGGACATCTTGTCTTCCTCTG
JMFF018A12+ TGACTTTAAGGTTGATATGAGTGGCCTGGTTGCTGCAGACGGACATCTTGTCTTCCTCTG
rJMFF018A12- TGACTTTAAGGNTGATATGAGCGGCCTGGTCGCCGCAGACGGGCATCTTGTCTTCCTCTG
                      ____________________________________________________________
consensus TGACTTTAAGGTTGATATGAGCGGCCTGGTCGCCGCAGACGGGCATCTTGTCTTCCTCTG
 
. : . : . : . : . : . :
rJMFF044A19- CTCCGGCCGACATCTCTCTTCTGTCTTTGTGCACAATAAATTGCTTATGCACAGTTTGGT
JMSF008A09+ CTCCGGCCGACATCTCACTTCTGTCTTCGTGCACAATAA
rJMSF008A09- CTCCGGCCGACATCTCTCTTCTGTCTTTGTGCACAATAAATTGCTTATGCACAGTTTGGT
JMFS056E04+ CTCTGGCCGACATCTCTCTTCTGTCTTCGTGCACAATAAATTGCTTATGCACAGTTTGGT
JMFS088C12+ CTCTGGCCGACATCTCTCTTCTGTCTTCGTGCACAATAAATTGCTTATGCACAGTTTGGT
JMFF044A19+ CTCTGGCCGACATCTCTCTTCTGTCTTCGTGCACAATAAATTGCTTATGCACAGTTTGGT
JMFF018A12+ CTCTGGCCGACATCTCTCTTCTGTCTTCGTGCACAATAAATTGCTTATGCACAGTTTGGT
rJMFF018A12- CTCCGGCCGACATCTCTCTTCTGTCTTTGTGCACAATAAATTGCTTATGCACAGTTTGGT
                      ____________________________________________________________
consensus CTCCGGCCGACATCTCTCTTCTGTCTTCGTGCACAATAAATTGCTTATGCACAGTTTGGT
 
. : . : . : . : . : . :
rJMFF044A19- GTAGCATTGCATCAATCTCATCACCATCTTCCATCT
rJMSF008A09- GTAGCATTGCATCAATCTCATCACCATCTTCCATCTCCAGCTCATCCGGAGTCTGCTCCC
JMFS056E04+ GTAGCATTGCATCAATCTCATCACCATCTTCCATCTCCAGCTCATCTGGAGTCTGCTCCC
JMFS088C12+ GTAGCATTGCATCAATCTCATCACCATCTTCCATCTCCAGCTCATCTGGAGTCTGCTCCC
JMFF044A19+ GTAGCATTGCATCAATCTCATCACCATCTTCCATCTCCAGCTCATCTGGAGTCTGCTCCC
JMFF018A12+ GTAGCATTGCATCAATCTCATCACCATCTTCCATCTCCAGCTCATCTGGAGTCTGCTCCC
rJMFF018A12- GTAGCATTGCATCAATCTCATCACCATCTTCCATCTCCAGCTCATCCGGAGTCTGCTCCC
                      ____________________________________________________________
consensus GTAGCATTGCATCAATCTCATCACCATCTTCCATCTCCAGCTCATCTGGAGTCTGCTCCC
 
. : . : . : . : . : . :
rJMSF008A09- ATCGAAGACGGCGACCATGAAACAGGAAAGCTGTTGAATTAAGANCCACTGATTTGTGAT
JMFS056E04+ ATCGAAGACGGCGACCATGAAACAGGAAAGCTGTTGAATTAAGATCCATTGATTTGCGAT
JMFS088C12+ ATCGAAGACGGCGACCATGAAACAGGAAAGCTGTTGAATTAAGATCCATTGATTTGCGAT
JMFF044A19+ ATCGAAGACGGCGACCATGAAACAGGAAAGCTGTTGAATTAAGATTCATTGATTTGCGAT
JMFF018A12+ ATCGAAGACGGCGACCATGAAACAGGAAAGCTGTTGAATTAAGATTCATTGATTTGCGAT
rJMFF018A12- ATCGAAGACGGCAACCATGAAACAGGAAAGCTGTTGAATTAAGATCCACTGATTTGTGAT
                      ____________________________________________________________
consensus ATCGAAGACGGCGACCATGAAACAGGAAAGCTGTTGAATTAAGATCCATTGATTTGCGAT
 
. : . : . : . : . : . :
rJMSF008A09- CACAGTATGATTTCATGAGTTTCTTCAGTCGGGTGCTTCTTCTCATCCTGAAAATCAGTT
JMFS056E04+ CACAGTACGATTTCATGAGTCTCTTCAGTCGGGTGCTTCTTTTCATCCTGAAAATCAGTT
JMFS088C12+ CACAGTACGATTTCATGAGTCTCTTCAGTCGGGTGCTTCTTTTCATCCTGAAAATCAGTT
JMFF044A19+ CACAGTACGATTTCATGAGTCTCTTCAGTCGGGTGCTTCTTTTCATCCTGAAAATCAGTT
JMFF018A12+ CACAGTACGATTTCATGAGTCTCTTCAGTCGGGTGCTTCTTTTCATCCTGAAAATCAGTT
rJMFF018A12- CACAGTATGATTTCATGAGTTTCTTCAGTCGGGTGCTTCTTCTCATCCTGAAAATCAGTT
                      ____________________________________________________________
consensus CACAGTACGATTTCATGAGTCTCTTCAGTCGGGTGCTTCTTTTCATCCTGAAAATCAGTT
 
. : . : . : . : . : . :
rJMSF008A09- CCTCCCTTCGTCGTTTCTGTCCTTGGACTTTAAGGTTGATATGA
JMFS056E04+ CCTCCCTTCGTCGTTTCTGTCCTCTGACTTTAAGGTTGATATGAGCGGCCAGATCGCCGC
JMFS088C12+ CCTCCCTTCGTCGTTTCTGTCCTCTGACTTTAAGGTTGATATGAGCGGCCAGATCGCCGC
JMFF044A19+ CCTCCCTTCGTCGTTTCTGTCCTCTGACTTTAAGGTTGATATGAGCGGCCAGATCGCCGC
JMFF018A12+ CCTCCCTTCGTCGTTTCTGTCCTCTGACTTTAAGGTTGATATGAGCGGCCAGATCGCCGC
rJMFF018A12- CCTCCCTTCGTCGNTTCTGTCCTTTGACTTTAAGGGTGATATGAGNGGGCCTGGTTGCTG
                      ____________________________________________________________
consensus CCTCCCTTCGTCGTTTCTGTCCTCTGACTTTAAGGTTGATATGAGCGGCCAGATCGCCGC
 
. : . : . : . : . : . :
JMFS056E04+ CGACGGGCATCTTGTC-TTCCTCTG
JMFS088C12+ CGACGGGCATCTTGTC-TTCCTCTGCTCCGGCCGACATCTCACTTCTG
JMFF044A19+ CGACGGGCATCTTGTC-TTCCTCTGCTCCGGCCGACATCTCACTTCTGTCTTCGTGCACA
JMFF018A12+ CGACGGGCATCTTGTC-TTCCTCTGCTCCGGCCGACATCTCACTTCTGTCTTCGTGCACA
rJMFF018A12- CAAANNAAATCTTGTCTTTCCTCTGCTCCGGCCGAATTTTCTCTTCTGNANTGCTAAGCC
                      ____________________________________________________________
consensus CGACGGGCATCTTGTC-TTCCTCTGCTCCGGCCGACATCTCACTTCTGTCTTCGTGCACA
 
. : . : . : . : . : . :
JMFF044A19+ ATAA
JMFF018A12+ ATAA
rJMFF018A12- ACAGATTTGGNGNAGNATTGNATNAANTCCNNCNCATCTTCCANTTCCCGNTCNTCNNGA
                      ____________________________________________________________
consensus ATAAATTTGGNGNAGNATTGNATNAANTCCNNCNCATCTTCCANTTCCCGNTCNTCNNGA