Contig 001088:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF016I06+                                              TTTAGTTTCTTGAAGGGGATCACC
                      ____________________________________________________________
consensus                                                 TTTAGTTTCTTGAAGGGGATCACC
 
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rJMFF016I06+          TTGTTTACTTTGATTGTTCTAATTGGTACTGGCTGGTCATTCTTGAAGCCTTATTTGCAA
                      ____________________________________________________________
consensus             TTGTTTACTTTGATTGTTCTAATTGGTACTGGCTGGTCATTCTTGAAGCCTTATTTGCAA
 
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rJMFF016I06+          GATAAGGAGAAGAAGGTGTTGATTGTTGTGATTCCCTTGCAAGTTGTGGCTAATGTGGCT
                      ____________________________________________________________
consensus             GATAAGGAGAAGAAGGTGTTGATTGTTGTGATTCCCTTGCAAGTTGTGGCTAATGTGGCT
 
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rJMFF034M19+            GGTAGTGATTGATGAGACAGGGCCATTTGGTGAGAGTTCATCTACATGGAAGCAGATT
rJMFF016I06+          CAGGTAGTGATTGATGAGACAGGGCCATTTGGTGAGAGTTCATCTACATGGAAGCAGATT
                      ____________________________________________________________
consensus             CAGGTAGTGATTGATGAGACAGGGCCATTTGGTGAGAGTTCATCTACATGGAAGCAGATT
 
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rJMFF034M19+          TTCTTGCTTGTTGACATTGTGTGTTGTTGTGCTGTATTGTTCCCGATTGTGTGGTCGATT
rJMFF016I06+          TTCTTGCTTGTTGACATTGTGTGTTGTTGTGCTGTATTGTTCCCGATTGTGTGGTCGATT
                      ____________________________________________________________
consensus             TTCTTGCTTGTTGACATTGTGTGTTGTTGTGCTGTATTGTTCCCGATTGTGTGGTCGATT
 
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rJMFF034M19+          AAGAACTTGCGTGAGGCTGCCAAGACGGATGGGAAGGCTGCCGTGAATTTGATGAAGTTG
rJMFF016I06+          AAGAACTTGCGTGAGGCTGCCAAGACGGATGGGAAGGCTGCCGTGAATTTGATGAAGTTG
                      ____________________________________________________________
consensus             AAGAACTTGCGTGAGGCTGCCAAGACGGATGGGAAGGCTGCCGTGAATTTGATGAAGTTG
 
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rJMFF034M19+          ACGTTGTTTAGGCAGTACTATATCATTGTTATATGCTACATCTACTTTACGAGGGTTGTG
rJMFF016I06+          ACGTTGTTTAGGCAGTACTATATCATTGTTATATGCTACATCTACTTTACGAGGGTTGTG
                      ____________________________________________________________
consensus             ACGTTGTTTAGGCAGTACTATATCATTGTTATATGCTACATCTACTTTACGAGGGTTGTG
 
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rJMFF034M19+          GTTTATGCTCTCGAGACTATTACTTCCTACCGATATCAGTGGACAAGTGTGGTCGCCTCT
rJMFF016I06+          GTTTATGCTCTCGAGACTATTACTTCCTACCGATATCAGTGGACAAGTGTGGTCGCCTCT
                      ____________________________________________________________
consensus             GTTTATGCTCTCGAGACTATTACTTCCTACCGATATCAGTGGACAAGTGTGGTCGCCTCT
 
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rJMFF034M19+          GAATTAGCCACACTTGCGTTCTACGTTTTTACTGGGTTCAACTTTAGGCCTAAGTCTCAC
rJMFF016I06+          GAATTAGCCACACTTGCGTTCTACGTTTTTACTGGGTTCAACTTTAGGCCTAAGTCTCAC
                      ____________________________________________________________
consensus             GAATTAGCCACACTTGCGTTCTACGTTTTTACTGGGTTCAACTTTAGGCCTAAGTCTCAC
 
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rJMFF034M19+          AACCCTTATTTTGCGATCGATGAGGATGAGGAAGAAGCTGCTGCTGAGGCACTTAAGCTC
rJMFF016I06+          AACCCTTATTTTGCGATCGATGAGGATGAGGAAGAAGCTGCTGCTGAGGCACTTAAGCTC
                      ____________________________________________________________
consensus             AACCCTTATTTTGCGATCGATGAGGATGAGGAAGAAGCTGCTGCTGAGGCACTTAAGCTC
 
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rJMFF034M19+          GAGGATGAATTTGAATTGTGAGTAAATTTTGGCTAGCATTAATGAAGATTGAAAAGTGCT
rJMFF016I06+          GAGGATGAATTTGAATTGTGAGTAAATTTTGGCTAGCATTAATGAAGATTGAAAAGTGCT
                      ____________________________________________________________
consensus             GAGGATGAATTTGAATTGTGAGTAAATTTTGGCTAGCATTAATGAAGATTGAAAAGTGCT
 
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rJMFF034M19+          GTGATATGTCAATTGCCTTGTAACCTTTTTGAATCAATTCTCCTAGTTTCTTTATGCATA
rJMFF016I06+          GTGATATGTCAATTGCCTTGTAACCTTTTTGAATCAATTCTCCTAGTTTCTTTATGCATA
                      ____________________________________________________________
consensus             GTGATATGTCAATTGCCTTGTAACCTTTTTGAATCAATTCTCCTAGTTTCTTTATGCATA
 
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rJMFF034M19+          CCACATCCCCCCCTTGTACTTTGTTCCATATACAAAATCCTATGATAAGTGTCTTGTTTG
rJMFF016I06+          CCACATCCCCCCCTTGTACTTTGTTCCATATACAAAATCCTATGATAAGTGTCTTGTTTG
                      ____________________________________________________________
consensus             CCACATCCCCCCCTTGTACTTTGTTCCATATACAAAATCCTATGATAAGTGTCTTGTTTG
 
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rJMFF034M19+          TCTGTTTCAGTATCTCATTGTTGAAAAACCTGTTGGGCTATTAGATGTGTTATACTTA  
rJMFF016I06+          TCTGTTTCAGTATCTCATTGTTGAAAAACCTGTTGGGCTATTAGATGTGTTATACTTATG
                      ____________________________________________________________
consensus             TCTGTTTCAGTATCTCATTGTTGAAAAACCTGTTGGGCTATTAGATGTGTTATACTTATG