Contig 001085:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016B11Sequence508003554 (4)ref|XP_009799957.1|1e-50PREDICTED: cationic amino acid transporter 7, chloroplastic-like [Nicotiana syl751001085 (4)ref|XP_009799957.1|2e-44PREDICTED: cationic amino acid transporter 7, chloroplastic-like [Nicotiana syl
JMSF007A06Sequence259003554 (4)ref|XP_009591737.1|3e-11PREDICTED: cationic amino acid transporter 7, chloroplastic-like [Nicotiana tom776001085 (4)ref|XP_004250472.1|2e-148PREDICTED: cationic amino acid transporter 7, chloroplastic [Solanum lycopersic
JMSF017F13Sequence561003554 (4)ref|XP_009799957.1|2e-62PREDICTED: cationic amino acid transporter 7, chloroplastic-like [Nicotiana syl725001085 (4)ref|XP_004250472.1|3e-117PREDICTED: cationic amino acid transporter 7, chloroplastic [Solanum lycopersic
JMSF021M06Sequence661003554 (4)ref|XP_009799957.1|4e-78PREDICTED: cationic amino acid transporter 7, chloroplastic-like [Nicotiana syl664001085 (4)ref|XP_004250472.1|6e-102PREDICTED: cationic amino acid transporter 7, chloroplastic [Solanum lycopersic

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF007A06+ TCAGCGAGGGGTCGCGAGGGTGGAGATGGGTGTCCAACGTCAT
                      ____________________________________________________________
consensus TCAGCGAGGGGTCGCGAGGGTGGAGATGGGTGTCCAACGTCAT
 
. : . : . : . : . : . :
rJMSF007A06+ AGGGGCGGGGGCCAGCTTCGGGATACTCACATCACTGTTGGTGGCGATGCTGGGGCAGGC
                      ____________________________________________________________
consensus AGGGGCGGGGGCCAGCTTCGGGATACTCACATCACTGTTGGTGGCGATGCTGGGGCAGGC
 
. : . : . : . : . : . :
rJMSF007A06+ TCGGTACATGTGTGTGATCGGACGGTCAGGAGTGGTCCCCAACTGGTTCGCCAAGGTTCA
rJMSF017F13+ ACTGGTTCGCCAAGGTTCA
                      ____________________________________________________________
consensus TCGGTACATGTGTGTGATCGGACGGTCAGGAGTGGTCCCCAACTGGTTCGCCAAGGTTCA
 
. : . : . : . : . : . :
rJMSF007A06+ TCCTAGGACGTCCACGCCCGTCAACGCTTCCGTCTTCCTCGGGATCTTCACTGCAGCCAT
rJMSF017F13+ TCCTAGGACGTCCACGCCCGTCAACGCTTCCGTCTTCCTCGGGATCTTCACTGCAGCCAT
rJMSF021M06+ GATCTTCACTGCAGCCAT
                      ____________________________________________________________
consensus TCCTAGGACGTCCACGCCCGTCAACGCTTCCGTCTTCCTCGGGATCTTCACTGCAGCCAT
 
. : . : . : . : . : . :
rJMSF007A06+ TGCGCTTTTCACTGATTTACAAATCCTCTTGAACCTGGTGACAATCGGCACCCTCTTCGT
rJMSF017F13+ TGCGCTTTTCACTGATTTACAAATCCTCTTGAACCTGGTGACAATCGGCACCCTCTTCGT
rJMSF021M06+ TGCGCTTTTCACTGATTTACAAATCCTCTTGAACCTGGTGACAATCGGCACCCTCTTCGT
                      ____________________________________________________________
consensus TGCGCTTTTCACTGATTTACAAATCCTCTTGAACCTGGTGACAATCGGCACCCTCTTCGT
 
. : . : . : . : . : . :
rJMSF007A06+ GTTCTACATGGTCGCAAATGCGGTGATCTACAAGCGCTATGTCACGGTGGGATCAACCAA
rJMSF017F13+ GTTCTACATGGTCGCAAATGCGGTGATCTACAAGCGCTATGTCACGGTGGGATCAACCAA
rJMSF021M06+ GTTCTACATGGTCGCAAATGCGGTGATCTACAAGCGCTATGTCACGGTGGGATCAACCAA
                      ____________________________________________________________
consensus GTTCTACATGGTCGCAAATGCGGTGATCTACAAGCGCTATGTCACGGTGGGATCAACCAA
 
. : . : . : . : . : . :
rJMSF007A06+ TCCGTGGCCAACCCTGTCTTACCTCTTCTGCTTCACCCTCACTTCGGTCTGGTTCACGCT
rJMSF017F13+ TCCGTGGCCAACCCTGTCTTACCTCTTCTGCTTCACCCTCACTTCGGTCTTGTTCACGCT
rJMSF021M06+ TCCGTGGCCAACCCTGTCTTACCTCTTCTGCTTCACCCTCACTTCGGTCTTGTTCACGCT
rJMFF016B11+ GCTTCACCCTCACTTCGGTCTTGTTCACGCT
                      ____________________________________________________________
consensus TCCGTGGCCAACCCTGTCTTACCTCTTCTGCTTCACCCTCACTTCGGTCTTGTTCACGCT
 
. : . : . : . : . : . :
rJMSF007A06+ GCTGTGGCACTGCGCACCGCCAGGCAAGGCGAAGGCCTTGGTGCTGGGCGGTTGCACCCT
rJMSF017F13+ GCTGTGGCACTGCGCACCGCCAGGCAAGGCGAAGGCCTTGGTGCTGGGCGGTTGCACCCT
rJMSF021M06+ GCTGTGGCACTGCGCACCGCCAGGCAAGGCGAAGGCCTTGGTGCTGGGCGGTTGCACCCT
rJMFF016B11+ GCTGTGGCACTGCGCACCGCCAGGCAAGGCGAAGGCCTTGGTGCTGGGCGGTTGCACCCT
                      ____________________________________________________________
consensus GCTGTGGCACTGCGCACCGCCAGGCAAGGCGAAGGCCTTGGTGCTGGGCGGTTGCACCCT
 
. : . : . : . : . : . :
rJMSF007A06+ CATCGCCATCGCCA-TTCTCCAGCTATTCCAGTATATGGTGCCCCAGGCGAAGAAACCCG
rJMSF017F13+ CATCGCCATCGCCA-TTCTCCAGCTATTCCAGTATATGGTGCCCCAGGCGAAGAAACCCG
rJMSF021M06+ CATCGCCATCGCCA-TTCTCCAGCTATTCCAGTATATGGTGCCCCAGGCGAAGAAACCCG
rJMFF016B11+ CATCGCCATCGCCATTTCTCCAGCTATTCCAGTATATGGTGCCCCAGGCGAAGAAACCCG
                      ____________________________________________________________
consensus CATCGCCATCGCCA-TTCTCCAGCTATTCCAGTATATGGTGCCCCAGGCGAAGAAACCCG
 
. : . : . : . : . : . :
rJMSF007A06+ AGCTGTGGGGTGTCCCATTGATGCCATGGATTCCATCCATGTCCATCTTCCTCAATATAT
rJMSF017F13+ AGCTGTGGGGTGTCCCATTGATGCCATGGATTCCATCCATGTCCATCTTCCTCAATATAT
rJMSF021M06+ AGCTGTGGGGTGTCCCATTGATGCCATGGATTCCATCCATGTCCATCTTCCTCAATATAT
rJMFF016B11+ AGCTGTGGGGTGTCCCATTGATGCCATGGATTTCATCCATGTCCATCTTCCTCAATATAT
                      ____________________________________________________________
consensus AGCTGTGGGGTGTCCCATTGATGCCATGGATTCCATCCATGTCCATCTTCCTCAATATAT
 
. : . : . : . : . : . :
rJMSF007A06+ TCCTGTTGGGTTCCCTTGACCGGCCATCCTATATCCGGTTCGGATTCTTTTCGGGCCTTG
rJMSF017F13+ TCCTGTTGGGTTCCCTTGACCGGCCATCCTATATCCGGTTCGGATTCTTTTCGGGCCTTG
rJMSF021M06+ TCCTGTTGGGTTCCCTTGACCGGCCATCCTATATCCGGTTCGGATTCTTTTCGGGCCTTG
rJMFF016B11+ TCCTGTTGGGTTCCCTTGACCGGCCATCCTATATCCGGTTCGGATTCTTTTCGGGCCTTG
                      ____________________________________________________________
consensus TCCTGTTGGGTTCCCTTGACCGGCCATCCTATATCCGGTTCGGATTCTTTTCGGGCCTTG
 
. : . : . : . : . : . :
rJMSF007A06+ CAGTGATTGTGTATGTGCTATACAGTGTCCATGCTAGCTTTGATGCTGGGGAACAAAAAA
rJMSF017F13+ CAGTGATTGTGTATGTGCTATACAGTGTCCATGCTAGCTTTGATGCTGGGGAACAAAAAA
rJMSF021M06+ CAGTGATTGTGTATGTGCTATACAGTGTCCATGCTAGCTTTGATGCTGGGGAACAAAAAA
rJMFF016B11+ CAGTGATTGTGTATGTGCTATACAGTGTCCATGCTAGCTTTGATGCTGGGGAACAAAAAA
                      ____________________________________________________________
consensus CAGTGATTGTGTATGTGCTATACAGTGTCCATGCTAGCTTTGATGCTGGGGAACAAAAAA
 
. : . : . : . : . : . :
rJMSF007A06+ CACTTGGTCAAGAGAATATTGAGATGGGGAAGGAATATAATGTACCCCGGGACCATTCTC
rJMSF017F13+ CACTTGGTCAAGAGAATATTGAGATGGGGAAGGAATATAATGTACCCCGGGACCATTCTC
rJMSF021M06+ CACTTGGTCAAGAGAATATTGAGATGGGGAAGGAATATAATGTACCCCGGGACCATTCTC
rJMFF016B11+ CACTTGGTCAAGAGAATATTGAGATGGGGAAGGAATATAATGTACCCCGGGACCATTCTC
                      ____________________________________________________________
consensus CACTTGGTCAAGAGAATATTGAGATGGGGAAGGAATATAATGTACCCCGGGACCATTCTC
 
. : . : . : . : . : . :
rJMSF007A06+ TCAAAGTATAAATG
rJMSF017F13+ TCAAAGTATAAATGTGTAATGGCTCATATATTTTAACCTTTTTCTTTTGCTTAGCTTCTT
rJMSF021M06+ TCAAAGTATAAATGTGTAATGGCTCATATATTTTAACCTTTTTCTTTTGCTTAGCTTCTT
rJMFF016B11+ TCAAAGTATAAATGTGTAATGGCTCATATATTTTAACCTTTTTCTTTTGCTTAGCTTCTT
                      ____________________________________________________________
consensus TCAAAGTATAAATGTGTAATGGCTCATATATTTTAACCTTTTTCTTTTGCTTAGCTTCTT
 
. : . : . : . : . : . :
rJMSF017F13+ ACATGGAATAGAGAAGTCCAGTGGGATAGGCTGCAATTTTGCAGCAC
rJMSF021M06+ ACATGGAATAGAGAAGTCCAGTGGGATAGGCTGCAATTTTGCAGCAC
rJMFF016B11+ ACATGGAATAGAGAAGTCCAGTGGGATAGGCTGCAATTTTGCAGCACTTGGCAACTTGTA
                      ____________________________________________________________
consensus ACATGGAATAGAGAAGTCCAGTGGGATAGGCTGCAATTTTGCAGCACTTGGCAACTTGTA
 
. : . : . : . : . : . :
rJMFF016B11+ TAGTTTGATTCCCAGTATTATTATTGGACTTCCGTTCAACATCTCCAAAATGCTAATTTT
                      ____________________________________________________________
consensus TAGTTTGATTCCCAGTATTATTATTGGACTTCCGTTCAACATCTCCAAAATGCTAATTTT
 
. : . : . : . : . : . :
rJMFF016B11+ AAGTCAACTATTGTTGGGGTTAGCTAGTTTCTTTCATACATTTTAGCTAATTTTAATGGG
                      ____________________________________________________________
consensus AAGTCAACTATTGTTGGGGTTAGCTAGTTTCTTTCATACATTTTAGCTAATTTTAATGGG
 
. : . : . : . : . : . :
rJMFF016B11+ ATCGAGAAGATGATAACAGGTCACTTTGTTTTATGAAATTTCGTTAAAATCTTGCTGGCA
                      ____________________________________________________________
consensus ATCGAGAAGATGATAACAGGTCACTTTGTTTTATGAAATTTCGTTAAAATCTTGCTGGCA
 
. : . : . : . : . : . :
rJMFF016B11+ GGTTGTCGGAACTCGAATGACCTATGAATCAATTTTTGGGCTTCATTTAACAAAATAAAT
                      ____________________________________________________________
consensus GGTTGTCGGAACTCGAATGACCTATGAATCAATTTTTGGGCTTCATTTAACAAAATAAAT