Contig 001066:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002E12Sequence373001066 (7)ref|XP_010255931.1|1e-06PREDICTED: uncharacterized protein LOC104596457 isoform X1 [Nelumbo nucifera]
JMFF012C23Sequence411001066 (7)ref|XP_009781633.1|53.1PREDICTED: uncharacterized protein LOC104230505 [Nicotiana sylvestris]
JMFN008G12Sequence500001066 (7)ref|XP_010255931.1|2e-06PREDICTED: uncharacterized protein LOC104596457 isoform X1 [Nelumbo nucifera]
JMFN025N07Sequence404001066 (7)
JMFN044H19Sequence482001066 (7)ref|XP_010255931.1|2e-06PREDICTED: uncharacterized protein LOC104596457 isoform X1 [Nelumbo nucifera]
JMSF024J03Sequence477001066 (7)ref|XP_009781633.1|50.8PREDICTED: uncharacterized protein LOC104230505 [Nicotiana sylvestris]423001066 (7)ref|XP_009781633.1|53.1PREDICTED: uncharacterized protein LOC104230505 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN044H19+ TGAATTTATTTATTTATTTATAATATAATAA
JMFN025N07+ TGAATTTATTTATTTATTTATAATATAATAA
JMFN008G12+ ATGTGAATTTATTTATTTATTTATAATATAATAA
                      ____________________________________________________________
consensus ATGTGAATTTATTTATTTATTTATAATATAATAA
 
. : . : . : . : . : . :
JMFN044H19+ TAGGAATAAGAGGGATATAAACCGCCAAGCAATCCACGTCATAGAGCCACTAAGTATTAC
JMFN025N07+ TAGGAATAAGAGGGATATAAACCGCCAAGCAATCCACGTCATAGAGCCACTAAGTATTAC
JMFN008G12+ TAGGAATAAGAGGGATATAAACCGCCAAGCAATCCACGTCATAGAGCCACTAAGTATTAC
JMSF024J03+ TAAACCGCCAAGCAATCCACGTCATAGAGCCACTAAGTATTAC
                      ____________________________________________________________
consensus TAGGAATAAGAGGGATATAAACCGCCAAGCAATCCACGTCATAGAGCCACTAAGTATTAC
 
. : . : . : . : . : . :
JMFN044H19+ AATAAACTGAAGAACATCAGCCTAAGCAAAAGCAGGCATTATCAAGTCATCAACTCATTT
JMFN025N07+ AATAAACTGAAGAACATCAGCCTAAGCAAAAGCAGGCATTATCAAGTCATCAACTCATTT
JMFN008G12+ AATAAACTGAAGAACATCAGCCTAAGCAAAAGCAGGCATTATCAAGTCATCAACTCATTT
rJMSF024J03- TAAACTGAAGAACATCAGCCTAAGCAAAAGCAGGCATTATCAAGTCATCAACTCATTT
JMSF024J03+ AATAAACTGAAGAACATCAGCCTAAGCAAAAGCAGGCATTATCAAGTCATCAACTCATTT
                      ____________________________________________________________
consensus AATAAACTGAAGAACATCAGCCTAAGCAAAAGCAGGCATTATCAAGTCATCAACTCATTT
 
. : . : . : . : . : . :
JMFN044H19+ GAAGTATATCTTATTGAGAGAGATGAGCATTAAGCCCAACTCCAATGCAAAAGTTTGGAC
JMFN025N07+ GAAGTATATCTTATTGAGAGAGATGAGCATTAAGCCCAACTCCAATGCAAAAGTTTGGAC
JMFN008G12+ GAAGTATATCTTATTGAGAGAGATGAGCATTAAGCCCAACTCCAATGCAAAAGTTTGGAC
rJMSF024J03- GAAGTATATCTTATTGAGAGAGATGAGCATTAAGCCCAACTCCAATGCAAAAGTTTGGAC
JMSF024J03+ GAAGTATATCTTATTGAGAGAGATGAGCATTAAGCCCAACTCCAATGCAAAAGTTTGGAC
JMFF002E12+ GTATATCTTATTGAGAGAGANGAGCANTAAGCCCAACTCCAATGCAAAAGTTTGGAC
rJMFF012C23- CTTATTGAGAGAGATGAGCATTAAGCCCAACTCCAATGCAAAAGTTTGGAC
                      ____________________________________________________________
consensus GAAGTATATCTTATTGAGAGAGATGAGCATTAAGCCCAACTCCAATGCAAAAGTTTGGAC
 
. : . : . : . : . : . :
JMFN044H19+ TAACACAAAATACATGGAGAAACCCTCAATCCAGTTGAAGATCAGATCATCAAATAAAGC
JMFN025N07+ TAACACAAAATACATGGAGAAACCCTCAATCCAGTTGAAGATCAGATCATCAAATAAAGC
JMFN008G12+ TAACACAAAATACATGGAGAAACCCTCAATCCAGTTGAAGATCAGATCATCAAATAAAGC
rJMSF024J03- TAACACAAAATACATGGAGAAACCCTCAATCCAGTTGAAGATCAGATCATCAAATAAAGC
JMSF024J03+ TAACACAAAATACATGGAGAAACCCTCAATCCAGTTGAAGATCAGATCATCAAATAAAGC
JMFF002E12+ TAACACAAAATACATGGAGANACCCTCAATCCAGTTGAAGATCAGATCATCAAATAAAGC
rJMFF012C23- TAACACAAAATACATGGAGAAACCCTCAATCCAGTTGAAGATCAGATCATCAAATAAAGC
                      ____________________________________________________________
consensus TAACACAAAATACATGGAGAAACCCTCAATCCAGTTGAAGATCAGATCATCAAATAAAGC
 
. : . : . : . : . : . :
JMFN044H19+ CGAAACCAAATCCCTTACTACTTTCTTTTCCTACTTGCTTGAAGCCAGTGTCTCTGAGTT
JMFN025N07+ CGAAACCAAATCCCTTACTACTTTCTTTTCCTACTTGCTTGAAGCCAGTGTCTCTGAGTT
JMFN008G12+ CGAAACCAAATCCCTTACTACTTTCTTTTCCTACTTGCTTGAAGCCAGTGTCTCTGAGTT
rJMSF024J03- CGAAACCAAATCCCTTACTACTTTCTTTTCCTACTTGCTTGAAGCCAGTGTCTCTGAGTT
JMSF024J03+ CGAAACCAAATCCCTTACTACTTTCTTTTCCTACTTGCTTGAAGCCAGTGTCTCTGAGTT
JMFF002E12+ CGAAACCAAATCCCTTACTACTTTCTTTTCCTACTTGCTTGAAGCCAGTGTCTCTGAGTT
rJMFF012C23- CGAAACCAAATCCCTTACTACTTTCTTTTCCTACTTGCTTGAAGCCAGTGTCTCTGAGTT
                      ____________________________________________________________
consensus CGAAACCAAATCCCTTACTACTTTCTTTTCCTACTTGCTTGAAGCCAGTGTCTCTGAGTT
 
. : . : . : . : . : . :
JMFN044H19+ TCTTGGCTTCGGCTTAATGGCTGGATCACTTTGGGAGAAGATAAGGTGTCCCACGACGAC
JMFN025N07+ TCTTGGCTTCGGCTTAATGGCTGGATCACTTTGGGAGAAGATAAGGTGTCCCACGACGAC
JMFN008G12+ TCTTGGCTTCGGCTTAATGGCTGGATCACTTTGGGAGAAGATAAGGTGTCCCACGACGAC
rJMSF024J03- TCTTGGCTTCGGCTTAATGGCTGGATCACTTTGGGAGAAGATAAGGTGTCCCACGACGAC
JMSF024J03+ TCTTGGCTTCGGCTTAATGGCTGGATCACTTTGGGAGAAGATAAGGTGTCCCACGACGAC
JMFF002E12+ TCTTGGCTTCGGCTTAATGGCTGGATCACTTTGGGAGAAGATAAGGTGTCCCACGACGAC
rJMFF012C23- TCTTGGCTTCGGCTTAATGGCTGGATCACTTTGGGAGAAGATAAGGTGTCCCACGACGAC
                      ____________________________________________________________
consensus TCTTGGCTTCGGCTTAATGGCTGGATCACTTTGGGAGAAGATAAGGTGTCCCACGACGAC
 
. : . : . : . : . : . :
JMFN044H19+ GGCGCCGACGACCGCGCCGACGATAGACGTTGGGCCAGTTAGCAGACTCCACTTTCTGTA
JMFN025N07+ GGCGCCGACGAC
JMFN008G12+ GGCGCCGACGACCGCGCCGACGATAGACGTTGGGCCAGTTAGCAGACTCCACTTTCTGTA
rJMSF024J03- GGCGCCGACGACCGCGCCGACGATAGACGTTGGGCCAGTTAGCAGACTCCACTTTCTGTA
JMSF024J03+ GGCGCCGACGACCGCGCCGACGATAGACGTTGGGCCAGTTAGCAGACTCCACTTTCTGTA
JMFF002E12+ GGCGCCGACGACCGCGCCGACGATAGACGTTGGGCCAGTTAGCAGACTCCACTTTCTGTA
rJMFF012C23- GGCGCCGACGACCGCGCCGACGATAGACGTTGGGCCAGTTAGCAGACTCCACTTTCTGTA
                      ____________________________________________________________
consensus GGCGCCGACGACCGCGCCGACGATAGACGTTGGGCCAGTTAGCAGACTCCACTTTCTGTA
 
. : . : . : . : . : . :
JMFN044H19+ TATCATCTTCGATTCTTCTTCTTCTCTCTCT
JMFN008G12+ TATCATCTTCGATTCTTCTTCTTCTCTCTCTGTGTCTCTCTGCGAG
rJMSF024J03- TATCATCTTCGATTCTTCTTCTTCTCTCTCTGTGTCTCTCTGCGAGTCGATTCTGGAGGA
JMSF024J03+ TATCATCTTCGATTCTTCTTCTTCTCTCTCTGTGTCTCTCTGCGAGTCGATTCTGGAGGA
JMFF002E12+ TATCATCTTCGATTCTTCTTCTTCTCTCTCTGTGTCTCTCTGCGAGTCGATTCTGGAGGA
rJMFF012C23- TATCATCTTCGATTCTTCTTCTTCTCTCTCTGTGTCTCTCTGCGAGTCGATTCTGGAGGA
                      ____________________________________________________________
consensus TATCATCTTCGATTCTTCTTCTTCTCTCTCTGTGTCTCTCTGCGAGTCGATTCTGGAGGA
 
. : . : . : . : . : . :
rJMSF024J03- ATGC
JMSF024J03+ ATGC
JMFF002E12+ ATGCGAT
rJMFF012C23- ATGCGATCGNTTTTTTTTTTTTTTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
                      ____________________________________________________________
consensus ATGCGATCGNTTTTTTTTTTTTTTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT