Contig 001045:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004M21Sequence533007396 (6)ref|XP_006342320.1|3e-72PREDICTED: TBCC domain-containing protein 1-like isoform X1 [Solanum tuberosum]714001045 (4)ref|XP_011075175.1|1e-32PREDICTED: TBCC domain-containing protein 1-like [Sesamum indicum]
JMFF008C09Sequence597007396 (6)ref|XP_006342320.1|9e-87PREDICTED: TBCC domain-containing protein 1-like isoform X1 [Solanum tuberosum]743001045 (4)ref|XP_011075175.1|5e-34PREDICTED: TBCC domain-containing protein 1-like [Sesamum indicum]
JMFF018C16Sequence592007396 (6)ref|XP_006342320.1|9e-86PREDICTED: TBCC domain-containing protein 1-like isoform X1 [Solanum tuberosum]742001045 (4)ref|XP_011075175.1|5e-35PREDICTED: TBCC domain-containing protein 1-like [Sesamum indicum]
JMSF003P16Sequence248007396 (6)ref|XP_006342320.1|4e-16PREDICTED: TBCC domain-containing protein 1-like isoform X1 [Solanum tuberosum]710001045 (4)ref|XP_011075175.1|1e-32PREDICTED: TBCC domain-containing protein 1-like [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF018C16+ GGTTTGAAGCTCAACAATCTGGTT
rJMFF008C09+ GGTTNGAAGCTCAACAATCTGNTT
                      ____________________________________________________________
consensus GGTTTGAAGCTCAACAATCTGGTT
 
. : . : . : . : . : . :
rJMFF018C16+ CCACGAAAGATAACCCTTTTCCCTTGCCAGATGCTTATATGGCTTCTCAGCATAAAAATC
rJMFF004M21+ CACGAAAGATAACCCTTTTCCCTTGCCAGATGCTTATATGGCTTCTCAGCATAAAAATC
rJMSF003P16+ CACGAAAGATAACCCTTTTCCCTTGCCAGATGCTTATATGGCTTCTCAGCATAAAAATC
rJMFF008C09+ CCACGAAAGATAACCCTTTTCCCTTGCCAGATGCTTATATGGCTTCTCAGCATAAAAATC
                      ____________________________________________________________
consensus CCACGAAAGATAACCCTTTTCCCTTGCCAGATGCTTATATGGCTTCTCAGCATAAAAATC
 
. : . : . : . : . : . :
rJMFF018C16+ ACAAGAATCTTGTGGAGATTAAGCAAATATTGAGGGAAACCGAGCTTGAAGACAGCCGGA
rJMFF004M21+ ACAAGAATCTTGTGGAGATTAAGCAAATATTGAGGGAAACCGAGCTTGAAGACAGCCGGA
rJMSF003P16+ ACAAGAATCTTGTGGAGATTAAGCAAATATTGAGGGAAACCGAGCTTGAAGACAGCCGGA
rJMFF008C09+ ACAAGAATCTTGTGGAGATTAAGCAAATATTGAGGGAAACCGAGCTTGAAGACAGCCGGA
                      ____________________________________________________________
consensus ACAAGAATCTTGTGGAGATTAAGCAAATATTGAGGGAAACCGAGCTTGAAGACAGCCGGA
 
. : . : . : . : . : . :
rJMFF018C16+ AACGGGAATTGGCTAGTGCTCTCCATGTGCTGTTTAAAGACTGGTTATATGCTTCTGGAA
rJMFF004M21+ AACGGGAATTGGCTAGTGCTCTCCATGTGCTGTTTAAAGACTGGTTATATGCTTCTGGAA
rJMSF003P16+ AACGGGAATTGGCTAGTGCTCTCCATGTGCTGTTTAAAGACTGGTTATATGCTTCTGGAA
rJMFF008C09+ AACGGGAATTGGCTAGTGCTCTCCATGTGCTGTTTAAAGACTGGTTATATGCTTCTGGAA
                      ____________________________________________________________
consensus AACGGGAATTGGCTAGTGCTCTCCATGTGCTGTTTAAAGACTGGTTATATGCTTCTGGAA
 
. : . : . : . : . : . :
rJMFF018C16+ ATATCAGGCAACTTTACTGCCTACAAGGTGAATAGAAGTGTTGTTGGATGATTTGAAGAG
rJMFF004M21+ ATATCAGGCAACTTTACTGCCTACAAGGTGAATAGAAGTGTTGTTGGATGATTTGAAGAG
rJMSF003P16+ ATATCAGGCAACTTTACTGCCTACAAGGTGAATAGAAGTGTTGTTGGATGATTTGAAGAG
rJMFF008C09+ ATATCAGGCAACTTTACTGCCTACAAGGTGAATAGAAGTGTTGTTGGATGATTTGAAGAG
                      ____________________________________________________________
consensus ATATCAGGCAACTTTACTGCCTACAAGGTGAATAGAAGTGTTGTTGGATGATTTGAAGAG
 
. : . : . : . : . : . :
rJMFF018C16+ GTCAAAAGGAGGTTTGCAAGTTGAGCATACTTTTGACCACCAATTTAAGTCGCCACACAC
rJMFF004M21+ GTCAAAAGGAGGTTTGCAAGTTGAGCATACTTTTGACCACCAATTTAAGTCGCCACACAC
rJMSF003P16+ GTCAAAAGGAGGTTTGCAAGTTGAGCATACTTTTGACCACCAATTTAAGTCGCCACACAC
rJMFF008C09+ GTCAAAAGGAGGTTTGCAAGTTGAGCATACTTTTGACCACCAATTTAAGTCGCCACACAC
                      ____________________________________________________________
consensus GTCAAAAGGAGGTTTGCAAGTTGAGCATACTTTTGACCACCAATTTAAGTCGCCACACAC
 
. : . : . : . : . : . :
rJMFF018C16+ TTGTTGTCAATTTTGAATGTGGTGGAGGCAGCCGAGAGTGCGATGCTAGGGTTTGCTGTT
rJMFF004M21+ TTGTTGTCAATTTTGAATGTGGTGGAGGCAGCCGAGAGTGCGATGCTAGGGTTTGCTGTT
rJMSF003P16+ TTGTTGTCAATTTTGAATGTGGTGGAGGCAGCCGAGAGTGCGATGCTAGGGTTTGCTGTT
rJMFF008C09+ TTGTTGTCAATTTTGAATGTGGTGGAGGCAGCCGAGAGTGCGATGCTAGGGTTTGCTGTT
                      ____________________________________________________________
consensus TTGTTGTCAATTTTGAATGTGGTGGAGGCAGCCGAGAGTGCGATGCTAGGGTTTGCTGTT
 
. : . : . : . : . : . :
rJMFF018C16+ GCAAACAAGCTTTGTCCCTTTGAAACTATCTTGCAGACAGATTATATTTAGTCATGCATC
rJMFF004M21+ GCAAACAAGCTTTGTCCCTTTGAAACTATCTTGCAGACAGATTATATTTAGTCATGCATC
rJMSF003P16+ GCAAACAAGCTTTGTCCCTTTGAAACTATCTTGCAGACAGATTATATTTAGTCATGCATC
rJMFF008C09+ GCAAACAAGCTTTGTCCCTTTGAAACTATCTTGCAGACAGATTATATTTAGTCATGCATC
                      ____________________________________________________________
consensus GCAAACAAGCTTTGTCCCTTTGAAACTATCTTGCAGACAGATTATATTTAGTCATGCATC
 
. : . : . : . : . : . :
rJMFF018C16+ TGCTAACTTGGTGTAGTTAGTTCCTTTGAAAGTAGTCTCTCTTATGAAATTACGTTCGTG
rJMFF004M21+ TGCTAACTTGGTGTAGTTAGTTCCTTTGAAAGTAGTCTCTCTTATGAAATTACGTTCGTG
rJMSF003P16+ TGCTAACTTGGTGTAGTTAGTTCCTTTGAAAGTAGTCTCTCTTATGAAATTTCGTTCGTG
rJMFF008C09+ TGCTAACTTGGTGTAGTTAGTTCCTTTGAAAGTAGTCTCTCTTATGAAATTACGTTCGTG
                      ____________________________________________________________
consensus TGCTAACTTGGTGTAGTTAGTTCCTTTGAAAGTAGTCTCTCTTATGAAATTACGTTCGTG
 
. : . : . : . : . : . :
rJMFF018C16+ TCAGTTCCGCATCGGAGTATTTAGTTTGTCAGTTAGCTCTTGTCTTCTGTTTGTATGGCT
rJMFF004M21+ TCAGTTCCGCATCGGAGTATTTAGTTTGTCAGTTAGCTCTTGTCTTCTGTTTGTATGGCT
rJMSF003P16+ TCAGTTCCGCATCGGAGTATTTAGTTTGTCAGTTAGCTCTTGTCTTCTGTTTGTATGGCT
rJMFF008C09+ TCAGTTCCGCATCGGAGTATTTAGTTTGTCAGTTAGCTCTTGTCTTCTGTTTGTATGGCT
                      ____________________________________________________________
consensus TCAGTTCCGCATCGGAGTATTTAGTTTGTCAGTTAGCTCTTGTCTTCTGTTTGTATGGCT
 
. : . : . : . : . : . :
rJMFF018C16+ GCTGCTGGGTAAAGTTTGGATATTTGAATGAATTAGGTTTGCTTCCTGCTGGTGAGAAAA
rJMFF004M21+ GCTGCTGGGTAAAGTTTGGATATTTGAATGAATTAGGTTTGCTTCCTGCTGGTGAGAAAA
rJMSF003P16+ GCTGCTGGGTAAAGTTTGGATATTTGAATGAATTAGGTTTGCTTCCTGCTGGTGAGAAAA
rJMFF008C09+ GCTGCTGGGTAAAGTTTGGATATTTGAATGAATTAGGTTTGCTTCCTGCTGGTGAGAAAA
                      ____________________________________________________________
consensus GCTGCTGGGTAAAGTTTGGATATTTGAATGAATTAGGTTTGCTTCCTGCTGGTGAGAAAA
 
. : . : . : . : . : . :
rJMFF018C16+ GCCAGCCAAGGCAAGCAGAGAAGTGGCTAGTGGTCAGTCAAGCTCTGTTTAGTCAAGTGT
rJMFF004M21+ GCCAGCCAAGGCAAGCAGAGAAGTGGCTAGTGGTCAGTCAAGCTCTGTTTAGTCAAGTGT
rJMSF003P16+ GCCAGCCAAGGCAAGCAGAGAAGTGGCTAGTGGTCAGTCAAGCTCTGTTTAGTCAAGTGT
rJMFF008C09+ GCCAGCCAAGGCAAGCAGAGAAGTGGCTAGTGGTCAGTCAAGCTCTGTTTAGTCAAGTGT
                      ____________________________________________________________
consensus GCCAGCCAAGGCAAGCAGAGAAGTGGCTAGTGGTCAGTCAAGCTCTGTTTAGTCAAGTGT
 
. : . : . : . : . : . :
rJMFF018C16+ TGTTATAAATTCTTGGCTTCATTGTTGT-CAGTGTCTTCCTTCTGTAATGTTTCC
rJMFF004M21+ TGTTATAAATTCTTGGCTTCATTGTTGT-CAGTGTCTTCCTTCTGTAATGT
rJMSF003P16+ TGTTATAAATTCTTGGCTTCATTGTTGTNCAGTGTCTTCCTTCTGTAATGT
rJMFF008C09+ TGTTATAAATTCTTGGCTTCATTGTTGT-CAGTGTCTTCCTTCTGTAATGTTTCCTGTAT
                      ____________________________________________________________
consensus TGTTATAAATTCTTGGCTTCATTGTTGT-CAGTGTCTTCCTTCTGTAATGTTTCCTGTAT