Contig 001043:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP016E03Sequence611001043 (4)ref|XP_009757482.1|2e-67PREDICTED: ATP-dependent 6-phosphofructokinase 3, partial [Nicotiana sylvestris
JMFF007O03Sequence575012831 (3)ref|XP_006342512.1|2e-107PREDICTED: 6-phosphofructokinase 3-like [Solanum tuberosum]776001043 (4)emb|CDP08198.1|2e-67unnamed protein product [Coffea canephora]
JMSF003O08Sequence214012831 (3)ref|XP_006342512.1|6e-25PREDICTED: 6-phosphofructokinase 3-like [Solanum tuberosum]696001043 (4)emb|CDP08198.1|6e-68unnamed protein product [Coffea canephora]
JMSF018F22Sequence237012831 (3)ref|XP_006342512.1|1e-25PREDICTED: 6-phosphofructokinase 3-like [Solanum tuberosum]795001043 (4)ref|XP_009757482.1|3e-71PREDICTED: ATP-dependent 6-phosphofructokinase 3, partial [Nicotiana sylvestris

Alignment

This contig is upended


. : . : . : . : . : . :
JMCP016E03- GGGCACAT
rJMSF018F22+ CTGGAGTTTGTTGAGNAAAGGCTGAAAGAAAATGGGCACAT
                      ____________________________________________________________
consensus CTGGAGTTTGTTGAGNAAAGGCTGAAAGAAAATGGGCACAT
 
. : . : . : . : . : . :
JMCP016E03- GGTGATTGTGATAGCTGAAGGAGCAGGACAGGAACTTCTTGCCGCTGAGAGTTCAAGTTC
rJMSF018F22+ GGTGANTGTGATAGCTGAAGGAGCAGGACAGGAACTTCTTGCCGCTGAGAGTTCAAGTTC
                      ____________________________________________________________
consensus GGTGATTGTGATAGCTGAAGGAGCAGGACAGGAACTTCTTGCCGCTGAGAGTTCAAGTTC
 
. : . : . : . : . : . :
JMCP016E03- CAAGGCTGAGAGTGATGCTTCAGGAAACAAGCTTCTCCAAGATGTTGGAATGTGGCTTTC
rJMSF018F22+ CANGGCTGAGAGTGATGCTTCAGGAAACAAGCTTCTCCAAGATGTTGGAATGTGGCTTTC
rJMSF003O08+ GGCTGAGAGTGATGCTTCAGGAAACAAGCTTCTCCAAGATGTTGGAATGTGGCTTTC
rJMFF007O03+ GGCTGAGAGTGATGCTTCAGGAAACAAGCTTCTCCAAGATGTTGGAATGTGGCTTTC
                      ____________________________________________________________
consensus CAAGGCTGAGAGTGATGCTTCAGGAAACAAGCTTCTCCAAGATGTTGGAATGTGGCTTTC
 
. : . : . : . : . : . :
JMCP016E03- TCAGAAAATCttGctaTATTCTAAACAGCGGAAGTTTCCAATCACTCTTAAATATATAGA
rJMSF018F22+ TCAGAAAATCAAGGATTATTCTAAACAGCGGAAGTTTCCAATCACTCTTAAATATATAGA
rJMSF003O08+ TCAGAAAATCAAGGATTATTCTAAACAGCGGAAGTTTCCAATCACTCTTAAATATATAGA
rJMFF007O03+ TCAGAAAATCAAGGATTATTCTAAACAGCGGAAGTTTCCAATCACTCTTAAATATATAGA
                      ____________________________________________________________
consensus TCAGAAAATCAAGGATTATTCTAAACAGCGGAAGTTTCCAATCACTCTTAAATATATAGA
 
. : . : . : . : . : . :
JMCP016E03- TCCAACTTATATGATCCGTGCTATCCCAAGTAATGCATCTGACAACGTGTATTGCACATT
rJMSF018F22+ TCCAACTTATATGATCCGTGCTATCCCAAGTAATGCATCTGACAACGTGTATTGCACATT
rJMSF003O08+ TCCAACTTATATGATCCGTGCTATCCCAAGTAATGCATCTGACAACGTGTATTGCACATT
rJMFF007O03+ TCCAACTTATATGATCCGTGCTATCCCAAGTAATGCATCTGACAACGTGTATTGCACATT
                      ____________________________________________________________
consensus TCCAACTTATATGATCCGTGCTATCCCAAGTAATGCATCTGACAACGTGTATTGCACATT
 
. : . : . : . : . : . :
JMCP016E03- GCTTGCTCAAAGTACTGTGCATGGAGCGATGGCTGGGTTTACAGGCTTCACATGTGGGCT
rJMSF018F22+ GCTTGCTCAAAGTACTGTGCATGGAGCGATGGCTGGGTTTACAGGCTTCACATGTGGGCT
rJMSF003O08+ GCTTGCTCAAAGTACTGTGCATGGAGCGATGGCTGGGTTTACAGGCTTCACATGTGGGCT
rJMFF007O03+ GCTTGCTCAAAGTACTGTGCATGGAGCGATGGCTGGGTTTACAGGCTTCACATGTGGGCT
                      ____________________________________________________________
consensus GCTTGCTCAAAGTACTGTGCATGGAGCGATGGCTGGGTTTACAGGCTTCACATGTGGGCT
 
. : . : . : . : . : . :
JMCP016E03- TGTCAATGGTCGCCACACTTACATACCATTCAATCGCATTACTGAGCGGCAAAACAAGGT
rJMSF018F22+ TGTCAATGGTCGCCACACTTACATACCATTCAATCGCATTACTGAGCGGCAAAACAAGGT
rJMSF003O08+ TGTCAATGGTCGCCACACTTACATACCATTCAATCGCATTACTGAGCGGCAAAACAAGGT
rJMFF007O03+ TGTCAATGGTCGCCACACTTACATACCATTCAATCGCATTACTGAGCGGCAAAACAAGGT
                      ____________________________________________________________
consensus TGTCAATGGTCGCCACACTTACATACCATTCAATCGCATTACTGAGCGGCAAAACAAGGT
 
. : . : . : . : . : . :
JMCP016E03- TGTAATTACTGACAGGATGTGGGCTCGGCTTCTTTCTTCAACCAATCAGCCAAGCTTCTT
rJMSF018F22+ TGTAATTACTGACAGGATGTGGGCTCGGCTTCTTTCTTCAACCAATCAGCCAAGCTTCTT
rJMSF003O08+ TGTAATTACTGACAGGATGTGGGCTCGGCTTCTTTCTTCAACCAATCAGCCAAGCTTCTT
rJMFF007O03+ TGTAATTACTGACAGGATGTGGGCTCGGCTTCTTTCTTCAACCAATCAGCCAAGCTTCTT
                      ____________________________________________________________
consensus TGTAATTACTGACAGGATGTGGGCTCGGCTTCTTTCTTCAACCAATCAGCCAAGCTTCTT
 
. : . : . : . : . : . :
JMCP016E03- GTGTCCAAAAGAGGTGGAAAAGGTGAAAGAAGAAGAGAAATTGAAAGAACAATTGCTAGG
rJMSF018F22+ GTGTCCAAAAGAGGTGGAAAAGGTGAAAGAAGAAGAGAAATTGAAAGAACAATTGCTAGG
rJMSF003O08+ GTGTCCAAAAGAGGTGGAAAAGGTGAAAGAAGAAGAGAAATTGAAAGAACAATTGCTAGG
rJMFF007O03+ GTGTCCAAAAGAGGTGGAAAAGGTGAAAGAAGAAGAGAAATTGAAAGAACAATTGCTAGG
                      ____________________________________________________________
consensus GTGTCCAAAAGAGGTGGAAAAGGTGAAAGAAGAAGAGAAATTGAAAGAACAATTGCTAGG
 
. : . : . : . : . : . :
JMCP016E03- TGCGGCTAACGGCAAGACACCTGCATCTAAGACGCCAGCATTGAAATAAAGCCATTAACC
rJMSF018F22+ TGCGGCTAACGGCAAGACACCTGCATCTAAGACGCCAGCATTGAAATAAAGCCATTAACC
rJMSF003O08+ TGCGGCTAACGGCAAGACACCTGCATCTAAGACGCCAGCATTGAAATAAAGCCATTAACC
rJMFF007O03+ TGCGGCTAACGGCAAGACACCTGCATCTAAGACGCCAGCATTGAAATAAAGCCATTAACC
                      ____________________________________________________________
consensus TGCGGCTAACGGCAAGACACCTGCATCTAAGACGCCAGCATTGAAATAAAGCCATTAACC
 
. : . : . : . : . : . :
JMCP016E03- ACTGTAATTGATCAATTTATGCCACTTCGAATCTGTTGTGTACTTTAATACTGCTTAGAA
rJMSF018F22+ ACTGTAATTGATCAATTTATGCCACTTCGAATCTGTTGTGTACTTTAATACTGCTTAGAA
rJMSF003O08+ ACTGTAATTGATCAATTTATGCCACTTCGAATCTGTTGTGTACTTTAATACTGCTTAGAA
rJMFF007O03+ ACTGTAATTGATCAATTTATGCCACTTCGAATCTGTTGTGTACTTTAATACTGCTTAGAA
                      ____________________________________________________________
consensus ACTGTAATTGATCAATTTATGCCACTTCGAATCTGTTGTGTACTTTAATACTGCTTAGAA
 
. : . : . : . : . : . :
JMCP016E03- TAA
rJMSF018F22+ TAATAATTCGGCCTTGTGTAGGAACAATTTGAAGGTTGCCAGTCTGTTGCAGTGCCTCTG
rJMSF003O08+ TAATAATTCGGCCTTGTGTAGGAACAATTTGAAGGTTGCCAGTCTGTTGCAGTGCCTCTG
rJMFF007O03+ TAATAATTCGGCCTTGTGTAGGAACAATTTGAAGGTTGCCAGTCTGTTGCAGTGCCTCTG
                      ____________________________________________________________
consensus TAATAATTCGGCCTTGTGTAGGAACAATTTGAAGGTTGCCAGTCTGTTGCAGTGCCTCTG
 
. : . : . : . : . : . :
rJMSF018F22+ CAGTGGACTATAACCCCCCCAGTAAAGTCTTTATTCTTTCTGGGTATCAGAGAACGAGAA
rJMSF003O08+ CAGTGGACTATAACCCCCCCAGTAAAGTCTTTATTCTTTCTGGGTATCAGAGAACGAGAA
rJMFF007O03+ CAGTGGACTATAACCCCCCCAGTAAAGTCTTTATTCTTTCTGGGTATCAGAGAACGAGAA
                      ____________________________________________________________
consensus CAGTGGACTATAACCCCCCCAGTAAAGTCTTTATTCTTTCTGGGTATCAGAGAACGAGAA
 
. : . : . : . : . : . :
rJMSF018F22+ A-CTATGTTGTGTGATTATGTATTTTTTTGTATGT
rJMSF003O08+ ACCTATGTTGTGTGATTATGTATTTTTTTGTATGT
rJMFF007O03+ A-CTATGTTGTGTGATTATGTATTTTTTTGTATGTTACTTTTGCATATGTAATATGACTC
                      ____________________________________________________________
consensus A-CTATGTTGTGTGATTATGTATTTTTTTGTATGTTACTTTTGCATATGTAATATGACTC
 
. : . : . : . : . : . :
rJMFF007O03+ ATTGTCATTTGGAAACTTCAAAAACATTTTGACTTGTTTTGCTCGAGTTGTGTTTAGTCA
                      ____________________________________________________________
consensus ATTGTCATTTGGAAACTTCAAAAACATTTTGACTTGTTTTGCTCGAGTTGTGTTTAGTCA