Contig 001040:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007E01Sequence501006576 (4)ref|XP_011071124.1|3e-84PREDICTED: high affinity nitrate transporter 2.5 [Sesamum indicum] ref|XP_011071430001040 (2)ref|XP_006367151.1|9e-32PREDICTED: high affinity nitrate transporter 2.5-like [Solanum tuberosum]
JMFF027B09Sequence577006576 (4)ref|XP_011071124.1|1e-85PREDICTED: high affinity nitrate transporter 2.5 [Sesamum indicum] ref|XP_011071754001040 (2)ref|XP_006367151.1|7e-58PREDICTED: high affinity nitrate transporter 2.5-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF027B09+ CGNCCAGGAGGAGGCATGTTATCGGATATTGTGG
                      ____________________________________________________________
consensus CGNCCAGGAGGAGGCATGTTATCGGATATTGTGG
 
. : . : . : . : . : . :
rJMFF027B09+ CGAAGAGGTACGGAATGAGGGGAAGGCTGCGGGCATTATGGGTTGTGCAGACCATAGGAG
                      ____________________________________________________________
consensus CGAAGAGGTACGGAATGAGGGGAAGGCTGCGGGCATTATGGGTTGTGCAGACCATAGGAG
 
. : . : . : . : . : . :
rJMFF027B09+ GGCTTCTTTGTGTTTTACTAGGAAGAGTTGGATCCTTGAGTGCTTCTGTTGCTGTCATGG
                      ____________________________________________________________
consensus GGCTTCTTTGTGTTTTACTAGGAAGAGTTGGATCCTTGAGTGCTTCTGTTGCTGTCATGG
 
. : . : . : . : . : . :
rJMFF027B09+ TTGTTTTCTCTGTGTTCGTTCAAGCTGCCTGTGGCCTCACCTTTGGAGTTGTCCCATTTG
                      ____________________________________________________________
consensus TTGTTTTCTCTGTGTTCGTTCAAGCTGCCTGTGGCCTCACCTTTGGAGTTGTCCCATTTG
 
. : . : . : . : . : . :
rJMFF027B09+ TTTCAAGAAGGTCATTGGGGATATCTGGGATGGCAGGAGGGGGAGGAAATGTTGGAGCAG
                      ____________________________________________________________
consensus TTTCAAGAAGGTCATTGGGGATATCTGGGATGGCAGGAGGGGGAGGAAATGTTGGAGCAG
 
. : . : . : . : . : . :
rJMFF027B09+ TCATAACACAAGTGATTTTCTTCAGAGGATCAAGATACAAGACCGAGACAGGGATAATGT
rJMFF007E01+ GGGATAATGT
                      ____________________________________________________________
consensus TCATAACACAAGTGATTTTCTTCAGAGGATCAAGATACAAGACCGAGACAGGGATAATGT
 
. : . : . : . : . : . :
rJMFF027B09+ TAATGGGAATCATGATCATCTGTTGCACGCTCCCAATTTTGTTCATCTACTTTCCTCAGT
rJMFF007E01+ TAATGGGAATCATGATCATCTGTTGCACGCTCCCAATTTTGTTCATCTACTTTCCTCAGT
                      ____________________________________________________________
consensus TAATGGGAATCATGATCATCTGTTGCACGCTCCCAATTTTGTTCATCTACTTTCCTCAGT
 
. : . : . : . : . : . :
rJMFF027B09+ GGGGAGGGATGTTTTATGGTCCCTCCAAAGGCACGACGGAGGAAGACTATTACGGGGCGG
rJMFF007E01+ GGGGAGGGATGTTTTATGGTCCCTCCAAAGGCACGACGGAGGAAGACTATTACGGGGCGG
                      ____________________________________________________________
consensus GGGGAGGGATGTTTTATGGTCCCTCCAAAGGCACGACGGAGGAAGACTATTACGGGGCGG
 
. : . : . : . : . : . :
rJMFF027B09+ AGTGGAGTGAGGCGGAGAAGGAGAAAGGGTTTCACCACCCAAGCATCAAATTTGCTAATA
rJMFF007E01+ AGTGGAGTGAGGCGGAGAAGGAGAAAGGGTTTCACCACCCAAGCATCAAATTTGCTAATA
                      ____________________________________________________________
consensus AGTGGAGTGAGGCGGAGAAGGAGAAAGGGTTTCACCACCCAAGCATCAAATTTGCTAATA
 
. : . : . : . : . : . :
rJMFF027B09+ ATAGCATAAGTGAAAGAGGAAGAAGAGTGGCATCTGCTCCCACACCCGTACATGGAACTC
rJMFF007E01+ ATAGCATAAGTGAAAGAGGAAGAAGAGTGGCATCTGCTCCCACACCCGTACATGGAACTC
                      ____________________________________________________________
consensus ATAGCATAAGTGAAAGAGGAAGAAGAGTGGCATCTGCTCCCACACCCGTACATGGAACTC
 
. : . : . : . : . : . :
rJMFF027B09+ CTCCATCTGATGTAGTCTATGTGTGAGCTTAGCTTTGTTTTATTATCACTCAGCTTTAGG
rJMFF007E01+ CTCCATCTGATGTAGTCTATGTGTGAGCTTAGCTTTGTTTTATTATCACTCAGCTTTAGG
                      ____________________________________________________________
consensus CTCCATCTGATGTAGTCTATGTGTGAGCTTAGCTTTGTTTTATTATCACTCAGCTTTAGG
 
. : . : . : . : . : . :
rJMFF027B09+ ATTCCTACTCCATCTTTATATATTGTTATTGTAAAATCTACTTTTATCAATCTTGCTTAG
rJMFF007E01+ ATTCCTACTCCATCTTTATATATTGTTATTGTAAAATCTACTTTTATCAATCTTGCTTAG
                      ____________________________________________________________
consensus ATTCCTACTCCATCTTTATATATTGTTATTGTAAAATCTACTTTTATCAATCTTGCTTAG
 
. : . : . : . : . : . :
rJMFF027B09+ CTATGACTATCTCTTGTATTCCTATAAATACGTTCCTTTT
rJMFF007E01+ CTATGACTATCTCTNGTATTCCTATAAATACGTTCCTTTTGTACTCTGTAAACAAAATGA
                      ____________________________________________________________
consensus CTATGACTATCTCTTGTATTCCTATAAATACGTTCCTTTTGTACTCTGTAAACAAAATGA