| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF006K04 | Sequence | 544 | 010581 (9) | emb|CDP03970.1| | 6e-80 | unnamed protein product [Coffea canephora] | 770 | 001037 (10) | ref|XP_009626166.1| | 3e-96 | PREDICTED: serine carboxypeptidase-like 20 [Nicotiana tomentosiformis] |
| JMFF020A07 | Sequence | 669 | 001037 (10) | ref|XP_009626166.1| | 2e-83 | PREDICTED: serine carboxypeptidase-like 20 [Nicotiana tomentosiformis] | |||||
| JMFF025J22 | Sequence | 683 | 001037 (10) | ref|XP_009626166.1| | 9e-103 | PREDICTED: serine carboxypeptidase-like 20 [Nicotiana tomentosiformis] | |||||
| JMSF007F04 | Sequence | 353 | 010581 (9) | ref|XP_011009329.1| | 3e-25 | PREDICTED: serine carboxypeptidase-like 20 [Populus euphratica] | 829 | 001037 (10) | ref|XP_009626166.1| | 7e-130 | PREDICTED: serine carboxypeptidase-like 20 [Nicotiana tomentosiformis] |
| JMSF020D13 | Sequence | 687 | 010581 (9) | emb|CDP03970.1| | 2e-111 | unnamed protein product [Coffea canephora] | 686 | 001037 (10) | ref|XP_009626166.1| | 4e-84 | PREDICTED: serine carboxypeptidase-like 20 [Nicotiana tomentosiformis] |
| JMSF020N13 | Sequence | 687 | 010581 (9) | emb|CDP03970.1| | 1e-110 | unnamed protein product [Coffea canephora] | 745 | 001037 (10) | ref|XP_009626166.1| | 5e-101 | PREDICTED: serine carboxypeptidase-like 20 [Nicotiana tomentosiformis] |
| JMSF021F19 | Sequence | 685 | 010581 (9) | emb|CDP03970.1| | 1e-110 | unnamed protein product [Coffea canephora] | 728 | 001037 (10) | ref|XP_009626166.1| | 2e-91 | PREDICTED: serine carboxypeptidase-like 20 [Nicotiana tomentosiformis] |
| JMSF030C17 | Sequence | 651 | 001037 (10) | ref|XP_009626166.1| | 2e-89 | PREDICTED: serine carboxypeptidase-like 20 [Nicotiana tomentosiformis] | 695 | 001037 (10) | ref|XP_009626166.1| | 3e-89 | PREDICTED: serine carboxypeptidase-like 20 [Nicotiana tomentosiformis] |
| JMSF034C21 | Sequence | 699 | 010581 (9) | emb|CDP03970.1| | 2e-113 | unnamed protein product [Coffea canephora] | 714 | 001037 (10) | ref|XP_009626166.1| | 2e-82 | PREDICTED: serine carboxypeptidase-like 20 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMSF007F04+ AGCTTGCCAAAGTTGATGCAGAGATTGCGGGTTTAAATATATATGA
____________________________________________________________
consensus AGCTTGCCAAAGTTGATGCAGAGATTGCGGGTTTAAATATATATGA
. : . : . : . : . : . :
rJMSF007F04+ CATTCTAGAGCCATGCTACCATGCCAAAGAATCTAGTACGATCATGCATGTAAATCCAAA
____________________________________________________________
consensus CATTCTAGAGCCATGCTACCATGCCAAAGAATCTAGTACGATCATGCATGTAAATCCAAA
. : . : . : . : . : . :
rJMSF007F04+ TTTACCATTGAGCTTCCGAAAACTTGGAGAGACTGAAAGGCCTCTTGCTGTAAGAACCAG
rJMFF025J22+ AACCAG
rJMSF020N13+ AACCAG
____________________________________________________________
consensus TTTACCATTGAGCTTCCGAAAACTTGGAGAGACTGAAAGGCCTCTTGCTGTAAGAACCAG
. : . : . : . : . : . :
rJMSF007F04+ AATGTTTGGCCGTGCATGGCCTCTTAGGGCTCCTGTAAGAGATGGAATTGTCCCAACCTG
rJMFF025J22+ AATGTTTGGCCGTGCATGGCCTCTTAGGGCTCCTGTAAGAGATGGAATTGTCCCAACCTG
rJMSF020N13+ AATGTTTGGCCGTGCATGGCCTCTTAGGGCTCCTGTAAGAGATGGAATTGTCCCAACCTG
rJMSF034C21+ CCCAACCTG
rJMSF021F19+ GGCTCCTGTAAGAGATGGAATTGTCCCAACCTG
rJMSF030C17+ GAATTGTCCCAACCTG
JMSF030C17- GAATTGTCCCAACCTG
rJMFF006K04+ CCGTGCATGGCCTCTTAGGGCTCCTGTAAGAGATGGAATTGTCCCAACCTG
____________________________________________________________
consensus AATGTTTGGCCGTGCATGGCCTCTTAGGGCTCCTGTAAGAGATGGAATTGTCCCAACCTG
. : . : . : . : . : . :
rJMSF007F04+ GCCTCAGCTTCTTCAAAGTGGCAATGT-CCCGTGCACTGATGATACAGTTGCCACTGCGT
rJMFF025J22+ GCCTCAGCTTCTTCAAAGTGGCAATGT-CCCGTGCACTGATGATACAGTTGCCACTGCGT
rJMSF020N13+ GCCTCAGCTTCTTCAAAGTGGCAACGT-CCCGTGCACTGATGATACAGTTGCCACTGCGT
rJMSF034C21+ GCNTCAGCTTCTTCAAAGTGGCAATGTCCCCGTGCACTGATGATACAGTTGCCACTGCGT
rJMSF021F19+ GCNTCAGCTTCTTCAAAGTGGCAATGT-CCCGTGCACTGATGATACAGTTGCCACTGCGT
rJMSF030C17+ GCCTCAGCTTCTTCAAAGTGGCAATGT-CCCGTGCACTGATGATACAGTTGCCACTGCGT
rJMFF020A07+ TCAAAGTGGCAATGT-CCCGTGCACTGATGATACAGTTGCCACTGCGT
rJMSF020D13+ CTTCAAAGTGGCAATGT-CCCGTGCACTGATGATACAGTTGCCACTGCGT
JMSF030C17- GCCTCAGCTTCTTCAAAGTGGCAATGT-CCCGTGCACTGATGATACAGTTGCCACTGCGT
rJMFF006K04+ GCCTCAGCTTCTTCAAAGTGGCAATGT-CCCGTGCACTGATGATACAGTTGCCACTGCGT
____________________________________________________________
consensus GCCTCAGCTTCTTCAAAGTGGCAATGT-CCCGTGCACTGATGATACAGTTGCCACTGCGT
. : . : . : . : . : . :
rJMSF007F04+ GGTTGAGCAGCCCCGAAGTGAGGAAAGCCATTCATGCAGAACAAGAAGCACTCACCGGTC
rJMFF025J22+ GGTTGAGCAGCCCCGAAGTGAGGAAAGCCATTCATGCAGAACAAGAAGCACTCACCGGTC
rJMSF020N13+ GGTTGAGCAGCCCCGAAGTGAGGAAAGCCATTCATGCAGAACAAGAAGCACTCACCGGTC
rJMSF034C21+ GGTTGAGCAGCCCCGAAGTGAGGAAAGCCATTCATGCAGAACAAGAAGCACTCACCGGTC
rJMSF021F19+ GGTTGAGCAGCCCCGAAGTGAGGAAAGCCATTCATGCAGAACAAGAAGCACTCACCGGTC
rJMSF030C17+ GGTTGAGCAGCCCCGAAGTGAGGAAAGCCATTCATGCAGAACAAGAAGCACTCACCGGTC
rJMFF020A07+ GGTTGAGCAGCCCCGAAGTGAGGAAAGCCATTCATGCAGAACAAGAAGCACTCACCGGTC
rJMSF020D13+ GGTTGAGCAGCCCCGAAGTGAGGAAAGCCATTCATGCAGAACAAGAAGCACTCACCGGTC
JMSF030C17- GGTTGAGCAGCCCCGAAGTGAGGAAAGCCATTCATGCAGAACAAGAAGCACTCACCGGTC
rJMFF006K04+ GGTTGAGCAGCCCCGAAGTGAGGAAAGCCATTCATGCAGAACAAGAAGCACTCACCGGTC
____________________________________________________________
consensus GGTTGAGCAGCCCCGAAGTGAGGAAAGCCATTCATGCAGAACAAGAAGCACTCACCGGTC
. : . : . : . : . : . :
rJMSF007F04+ CTTTTGAGCTATGTACAGATAAGATTACTTTTACGCATGATTCTGGAAGCATGATCAAGT
rJMFF025J22+ CTTTTGAGCTATGTACAGATAAGATTACTTTTACGCATGATTCTGGAAGCATGATCAAGT
rJMSF020N13+ CTTTTGAGCTATGTACAGATAAGATTACTTTTACGCATGATTCTGGAAGCATGATCAAGT
rJMSF034C21+ CTTTTGAGCTATGTACAGATAAGATTACTTTTACGCATGATTCTGGAAGCATGATCAAGT
rJMSF021F19+ CTTTTGAGCTATGTACAGATAAGATTACTTTTACGCATGATTCTGGAAGCATGATCAAGT
rJMSF030C17+ CTTTTGAGCTATGTACAGATAAGATTACTTTTACGCATGATTCTGGAAGCATGATCAAGT
rJMFF020A07+ CTTTTGAGCTATGTACAGATAAGATTACTTTTACGCATGATTCTGGAAGCATGATCAAGT
rJMSF020D13+ CTTTTGAGCTATGTACAGATAAGATTACTTTTACGCATGATTCTGGAAGCATGATCAAGT
JMSF030C17- CTTTTGAGCTATGTACAGATAAGATTACTTTTACGCATGATTCTGGAAGCATGATCAAGT
rJMFF006K04+ CTTTTGAGCTATGTACAGATAAGATTACTTTTACGCATGATTCTGGAAGCATGATCAAGT
____________________________________________________________
consensus CTTTTGAGCTATGTACAGATAAGATTACTTTTACGCATGATTCTGGAAGCATGATCAAGT
. : . : . : . : . : . :
rJMSF007F04+ ATCATAAAAATCTAACCTCCCGGGGTTATCGGGCACTTATATTCAGTGGTGATCATGATA
rJMFF025J22+ ATCATAAAAATCTAACCTCCCGGGGTTATCGGGCACTTATATTCAGTGGTGATCATGATA
rJMSF020N13+ ATCATAAAAATCTAACCTCCCGGGGTTATCGGGCACTTATATTCAGTGGTGATCATGATA
rJMSF034C21+ ATCATAAAAATCTAACCTCCCGGGGTTATCGGGCACTTATATTCAGTGGTGATCATGATA
rJMSF021F19+ ATCATAAAAATCTAACCTCCCGGGGTTATCGGGCACTTATATTCAGTGGTGATCATGATA
rJMSF030C17+ ATCATAAAAATCTAACCTCCCGGGGTTATCGGGCACTTATATTCAGTGGTGATCATGATA
rJMFF020A07+ ATCATAAAAATCTAACCTCCCGGGGTTATCGGGCACTTATATTCAGTGGTGATCATGATA
rJMSF020D13+ ATCATAAAAATCTAACCTCCCGGGGTTATCGGGCACTTATATTCAGTGGTGATCATGATA
JMSF030C17- ATCATAAAAATCTAACCTCCCGGGGTTATCGGGCACTTATATTCAGTGGTGATCATGATA
rJMFF006K04+ ATCATAAAAATCTAACCTCCCGGGGTTATCGGGCACTTATATTCAGTGGTGATCATGATA
____________________________________________________________
consensus ATCATAAAAATCTAACCTCCCGGGGTTATCGGGCACTTATATTCAGTGGTGATCATGATA
. : . : . : . : . : . :
rJMSF007F04+ TGTGTGTACCATATACTGGGAGTGAAGCGTGGACAAGGTCAGTTGGATATAAGATCATCG
rJMFF025J22+ TGTGTGTACCATATACTGGGAGTGAAGCGTGGACAAGGTCAGTTGGATATAAGATCATCG
rJMSF020N13+ TGTGTGTACCATATACTGGGAGTGAAGCGTGGACAAGGTCAGTTGGATATAAGATCATCG
rJMSF034C21+ TGTGTGTACCATATACTGGGAGTGAAGCGTGGACAAGGTCAGTTGGATATAAGATCATCG
rJMSF021F19+ TGTGTGTACCATATACTGGGAGTGAAGCGTGGACAAGGTCAGTTGGATATAAGATCATCG
rJMSF030C17+ TGTGTGTACCATATACTGGGAGTGAAGCGTGGACAAGGTCAGTTGGATATAAGATCATCG
rJMFF020A07+ TGTGTGTACCATATACTGGGAGTGAAGCGTGGACAAGGTCAGTTGGATATAAGATCATCG
rJMSF020D13+ TGTGTGTACCATATACTGGGAGTGAAGCGTGGACAAGGTCAGTTGGATATAAGATCATCG
JMSF030C17- TGTGTGTACCATATACTGGGAGTGAAGCGTGGACAAGGTCAGTTGGATATAAGATCATCG
rJMFF006K04+ TGTGTGTACCATATACTGGGAGTGAAGCGTGGACAAGGTCAGTTGGATATAAGATCATCG
____________________________________________________________
consensus TGTGTGTACCATATACTGGGAGTGAAGCGTGGACAAGGTCAGTTGGATATAAGATCATCG
. : . : . : . : . : . :
rJMSF007F04+ ATGAGTGGAGGCCTTGGATTGTGAATGAGCAAGTTGCAGGGTATATTCAAGGTTATGACT
rJMFF025J22+ ATGAGTGGAGGCCTTGGATTGTGAATGAGCAAGTTGCAGGGTATATTCAAGGTTATGACT
rJMSF020N13+ ATGAGTGGAGGCCTTGGATTGTGAATGAGCAAGTTGCAGGGTATATTCAAGGTTATGACT
rJMSF034C21+ ATGAGTGGAGGCCTTGGATTGTGAATGAGCAAGTTGCAGGGTATATTCAAGGTTATGACT
rJMSF021F19+ ATGAGTGGAGGCCTTGGATTGTGAATGAGCAAGTTGCAGGGTATATTCAAGGTTATGACT
rJMSF030C17+ ATGAGTGGAGGCCTTGGATTGTGAATGAGCAAGTTGCAGGGTATATTCAAGGTTATGACT
rJMFF020A07+ ATGAGTGGAGGCCTTGGATTGTGAATGAGCAAGTTGCAGGGTATATTCAAGGTTATGACT
rJMSF020D13+ ATGAGTGGAGGCCTTGGATTGTGAATGAGCAAGTTGCAGGGTATATTCAAGGTTATGACT
JMSF030C17- ATGAGTGGAGGCCTTGGATTGTGAATGAGCAAGTTGCAGGGTATATTCAAGGTTATGACT
rJMFF006K04+ ATGAGTGGAGGCCTTGGATTGTGAATGAGCAAGTTGCAGGGTATATTCAAGGTTATGACT
____________________________________________________________
consensus ATGAGTGGAGGCCTTGGATTGTGAATGAGCAAGTTGCAGGGTATATTCAAGGTTATGACT
. : . : . : . : . : . :
rJMSF007F04+ ACAACCTCACCTTTCTCACCATTAAGGGTGCTGGGCACACTGTCCCGGAGTACAAACCTA
rJMFF025J22+ ACAACCTCACCTTTCTCACCATTAAGGGTGCTGGGCACACTGTCCCGGAGTACAAACCTA
rJMSF020N13+ ACAACCTCACCTTTCTCACCATTAAGGGTGCTGGGCACACTGTCCCGGAGTACAAACCTA
rJMSF034C21+ ACAACCTCACCTTTCTCACCATTAAGGGTGCTGGGCACACTGTCCCGGAGTACAAACCTA
rJMSF021F19+ ACAACCTCACCTTTCTCACCATTAAGGGTGCTGGGCACACTGTCCCGGAGTACAAACCTA
rJMSF030C17+ ACAACCTCACCTTTCTCACCATTAAGGGTGCTGGGCACACTGTCCCGGAGTACAAACCTA
rJMFF020A07+ ACAACCTCACCTTTCTCACCATTAAGGGTGCTGGGCACACTGTCCCGGAGTACAAACCTA
rJMSF020D13+ ACAACCTCACCTTTCTCACCATTAAGGGTGCTGGGCACACTGTCCCGGAGTACAAACCTA
JMSF030C17- ACAACCTCACCTTTCTCACCATTAAGGGTGCTGGGCACACTGTCCCGGAGTACAAACCTA
rJMFF006K04+ ACAACCTCACCTTTCTCACCATTAAGGATGCTGGGCACACTGTCCCGGAGTACAAACCTA
____________________________________________________________
consensus ACAACCTCACCTTTCTCACCATTAAGGGTGCTGGGCACACTGTCCCGGAGTACAAACCTA
. : . : . : . : . : . :
rJMSF007F04+ AGGAGGCGTTGGCATTTTATACCCGCTGGCTCGAGGGAAAGAGCATATGAAACATTAGAT
rJMFF025J22+ AGGAGGCGTTGGCATTTTATACCCGCTGGCTCGAGGGAAAGAGCATATGAAACATTAGAT
rJMSF020N13+ AGGAGGCGTTGGCATTTTATACCCGCTGGCTCGAGGGAAAGAGCATATGAAACATTAGAT
rJMSF034C21+ AGGAGGCGTTGGCATTTTATACCCGCTGGCTCGAGGGAAAGAGCATATGAAACATTAGAT
rJMSF021F19+ AGGAGGCGTTGGCATTTTATACCCGCTGGCTCGAGGGAAAGAGCATATGAAACATTAGAT
rJMSF030C17+ AGGAGGCGTTGGCATTTTATACCCGCTGGCTCGAGGGAAAGAGCATATGAAACATTAGAT
rJMFF020A07+ AGGAGGCGTTGGCATTTTATACCCGCTGGCTCGAGGGAAAGAGCATATGAAACATTAGAT
rJMSF020D13+ AGGAGGCGTTGGCATTTTATACCCGCTGGCTCGAGGGAAAGAGCATATGAAACATTAGAT
JMSF030C17- AGGAGGCGTTGGCATTTTATACCCGCTGGCTCGAGGGAAAGAGCATATGAAACATTAGAT
rJMFF006K04+ AGGAGGCGTTGGCATTTTATACCCGCTGGCTCGAGGGAAAGAGCATATGAAACATTAGAT
____________________________________________________________
consensus AGGAGGCGTTGGCATTTTATACCCGCTGGCTCGAGGGAAAGAGCATATGAAACATTAGAT
. : . : . : . : . : . :
rJMSF007F04+ ACTATAGTGAAGTTGATTATTTCCTTTGAAAAATAAGGAATGTTTATCCTCTATTATTTG
rJMFF025J22+ ACTATAGTGAAGTTGATTATTTCCTTTGAAAAATAAGGAATGTTTATCCTCTATTATTTG
rJMSF020N13+ ACTATAGTGAAGTTGATTATTTCCTTTGAAAAATAAGGAATGTTTATCCTCTATTATTTG
rJMSF034C21+ ACTATAGTGAAGTTGATTATTTCCTTTGAAAAATAAGGAATGTTTATCCTCTATTATTTG
rJMSF021F19+ ACTATAGTGAAGTTGATTATTTCCTTTGAAAAATAAGGAATGTTTATCCTCTATTATTTG
rJMSF030C17+ ACTATAGTGAAGTTGATTATTTCCTTTGAAAAATAAGGAATGTTTATCCTCTATTATTTG
rJMFF020A07+ ACTATAGTGAAGTTGATTATTTCCTTTGAAAAATAAGGAATGTTTATCCTCTATTATTTG
rJMSF020D13+ ACTATAGTGAAGTTGATTATTTCCTTTGAAAAATAAGGAATGTTTATCCTCTATTATTTG
JMSF030C17- ACTATAGTGAAGTTGATTATTTCCTTTGAAAAATAAGGAATGTTTATCCTCTATTATTTG
rJMFF006K04+ ACTATAGTGAAGTTGATTATTTCCTTTGAAAAATAAGGAATGTTTATCCTCTATTATTTG
____________________________________________________________
consensus ACTATAGTGAAGTTGATTATTTCCTTTGAAAAATAAGGAATGTTTATCCTCTATTATTTG
. : . : . : . : . : . :
rJMSF007F04+ GGTGATTTTCGAGTTTGGAAAGAAACCATATCTTTCCTGAGAGGGGTTAGGAGAGAAC
rJMFF025J22+ GGTGATTTTCGAGTTTGGAAAGAAACCATATCTTTCCTGAGAGGGGTTAGGAGAGAACAA
rJMSF020N13+ GGTGATTTTCGAGTTTGGAAAGAAACCATATCTTTCCTGAGAGGGGTTAGGAGAGAACAA
rJMSF034C21+ GGTGATTTTCGAGTTTGGAAAGAAACCATATCTTTCCTGAGAGGGGTTAGGAGAGAACAA
rJMSF021F19+ GGTGATTTTCGAGTTTGGAAAGAAACCATATCTTTCCTGAGAGGGGTTAGGAGAGAACAA
rJMSF030C17+ GGTGATTTTCGAGTTTGGAAAGAAACCATATCTTTCCTGAGAGGGGTTAGGAGAGAACAA
rJMFF020A07+ GGTGATTTTCGAGTTTGGAAAGAAACCATATCTTTCCTGAGAGGGGTTAGGAGAGAACAA
rJMSF020D13+ GGTGATTTTCGAGTTTGGAAAGAAACCATATCTTTCCTGAGAGGGGTTAGGAGAGAACAA
JMSF030C17- GGTGATTTTCGAGTTTGGAAAGAAACCATATCTTTCCTGAGAGGGGTTAGGAGAGAACAA
rJMFF006K04+ GGTGATTTTCGAGTTTGGAAAGAAACCATATCTTTCCTGAGAGGGGTTAGGAGAGAACAA
____________________________________________________________
consensus GGTGATTTTCGAGTTTGGAAAGAAACCATATCTTTCCTGAGAGGGGTTAGGAGAGAACAA
. : . : . : . : . : . :
rJMFF025J22+ GACTGTGAAAAT
rJMSF020N13+ GACTGTGAAAATGTATTGTGAATAAAATTCTTACTTTAAGGAACCCATAGAGGTTTCAAT
rJMSF034C21+ GACTGTGAAAATGTATTGTGAATAAAATTCTTACTTTAAGGAACCCATAGAGGTTTC
rJMSF021F19+ GACTGTGAAAATGTATTGTGAATAAAATTCTTACTTTAAGGAACCCATAGAGGTTTCAAT
rJMSF030C17+ GACTGTGAAAATGTATTGTGAATAAAATTCTTACTTTAAGGAACCCATAGAGGTTTCAAT
rJMFF020A07+ GACTGTGAAAATGTATTGTGAATAAAATTCTTACTTTAAGGAACCCATAGAGGTTTCAAT
rJMSF020D13+ GACTGTGAAAATGTATTGTGAATAAAATTCTTACTTTAAGGAACCCATAGAGGTTTCAAT
JMSF030C17- GACTGTGAAAATGTATTGTGAATAAAATTCTTACTT
rJMFF006K04+ GACTGTGAAAATGTATTGTGAATAAAATTCTTACTTTAAGGAACCCATAGAGGTTTCAAT
____________________________________________________________
consensus GACTGTGAAAATGTATTGTGAATAAAATTCTTACTTTAAGGAACCCATAGAGGTTTCAAT
. : . : . : . : . : . :
rJMSF020N13+ GTTCTGAC
rJMSF021F19+ GTTCTGAC
rJMSF030C17+ GTTCTGACAGTGTGAAGTAC
rJMFF020A07+ GTTCTGACAGTGTGAAGTAC
rJMSF020D13+ GTTCTGAC
rJMFF006K04+ GTTCTGACAGTGTGAAGTACTGTGAATTCTGCAATTATAGTTTATGTAATACGAAAGAAT
____________________________________________________________
consensus GTTCTGACAGTGTGAAGTACTGTGAATTCTGCAATTATAGTTTATGTAATACGAAAGAAT