| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF005M19 | Sequence | 455 | 007341 (3) | ref|XP_004246416.1| | 107 | PREDICTED: uncharacterized protein LOC101251023 [Solanum lycopersicum] | 707 | 001034 (3) | ref|XP_009595157.1| | 1e-80 | PREDICTED: uncharacterized protein LOC104091505 isoform X1 [Nicotiana tomentosi |
| JMFF015E11 | Sequence | 591 | 007341 (3) | ref|XP_004246416.1| | 164 | PREDICTED: uncharacterized protein LOC101251023 [Solanum lycopersicum] | 710 | 001034 (3) | ref|XP_009595157.1| | 1e-80 | PREDICTED: uncharacterized protein LOC104091505 isoform X1 [Nicotiana tomentosi |
| JMFF035K02 | Sequence | 541 | 007341 (3) | ref|XP_004246416.1| | 150 | PREDICTED: uncharacterized protein LOC101251023 [Solanum lycopersicum] | 713 | 001034 (3) | ref|XP_009595157.1| | 2e-80 | PREDICTED: uncharacterized protein LOC104091505 isoform X1 [Nicotiana tomentosi |
This contig is upended
. : . : . : . : . : . :
rJMFF015E11+ TATGGGGGATTTTGAAATGGCGAAGCAATTGTACACAAGAGTGATTC
rJMFF035K02+ TCACCGTATGGGGGATTTTGAAATGGCGAAGCAATTGTACACAAGAGTGATTC
rJMFF005M19+ TATGGGGGATTTTGAAATGGCGAAGCAATTGTACACAAGAGTGATTC
____________________________________________________________
consensus TCACCGTATGGGGGATTTTGAAATGGCGAAGCAATTGTACACAAGAGTGATTC
. : . : . : . : . : . :
rJMFF015E11+ ATGAGGAATCTTTGGGCAAAAGTTCTAGTTATCTACATCAGTTATCAGCTTGTAATATGA
rJMFF035K02+ ATGAGGAATCTTTGGGCAAAAGTTCTAGTTATCTACATCAGTTATCAGCTTGTAATATGA
rJMFF005M19+ ATGAGGAATCTTTGGGCAAAAGTTCTAGTTATCTACATCAGTTATCAGCTTGTAATATGA
____________________________________________________________
consensus ATGAGGAATCTTTGGGCAAAAGTTCTAGTTATCTACATCAGTTATCAGCTTGTAATATGA
. : . : . : . : . : . :
rJMFF015E11+ ATTTCGAGGATGTTATATTAGGAGCTACTTGTGCTTTAGGACAGCTTGAGGCTCATTTGG
rJMFF035K02+ ATTTCGAGGATGTTATATTAGGAGCTACTTGTGCTTTAGGACAGCTTGAGGCTCATTTGG
rJMFF005M19+ ATTTCGAGGATGTTATATTAGGAGCTACTTGTGCTTTAGGACAGCTTGAGGCTCATTTGG
____________________________________________________________
consensus ATTTCGAGGATGTTATATTAGGAGCTACTTGTGCTTTAGGACAGCTTGAGGCTCATTTGG
. : . : . : . : . : . :
rJMFF015E11+ GGAACTTTGACAAAGCAGAGAAGATGCTAACTGAAGCACTGGTGAAAGCGGAAGAAACTT
rJMFF035K02+ GGAACTTTGACAAAGCAGAGAAGATGCTAACTGAAGCACTGGTGAAAGCGGAAGAAACTT
rJMFF005M19+ GGAACTTTGACAAAGCAGAGAAGATGCTAACTGAAGCACTGGTGAAAGCGGAAGAAACTT
____________________________________________________________
consensus GGAACTTTGACAAAGCAGAGAAGATGCTAACTGAAGCACTGGTGAAAGCGGAAGAAACTT
. : . : . : . : . : . :
rJMFF015E11+ TTGGTGATCGTCATCCCAAAGTTGGTGTTATTTTAACCTGCGTAGTTCATATGTATCGAA
rJMFF035K02+ TTGGTGATCGTCATCCCAAAGTTGGTGTTATTTTAACCTGCGTAGTTCATATGTATCGAA
rJMFF005M19+ TTGGTGATCGTCATCCCAAAGTTGGTGTTATTTTAACCTGCGTAGTTCATATGTATCGAA
____________________________________________________________
consensus TTGGTGATCGTCATCCCAAAGTTGGTGTTATTTTAACCTGCGTAGTTCATATGTATCGAA
. : . : . : . : . : . :
rJMFF015E11+ ATAAATCAACAGTTGAGGAATCGAGCTCTCTTTTAATTCAAGAGGGACTTTACAGAAGGG
rJMFF035K02+ ATAAATCAACAGTTGAGGAATCGAGCTCTCTTTTAATTCAAGAGGGACTTTACAGAAGGG
rJMFF005M19+ ATAAATCAACAGTTGAGGAATCGAGCTCTCTTTTAATTCAAGAGGGACTTTACAGAAGGG
____________________________________________________________
consensus ATAAATCAACAGTTGAGGAATCGAGCTCTCTTTTAATTCAAGAGGGACTTTACAGAAGGG
. : . : . : . : . : . :
rJMFF015E11+ CAATTGAATTGCTTAAAGCTCCTCCACTGGAGACTGAAGGTGCTGAAGAGAAGGCTTGCA
rJMFF035K02+ CAATTGAATTGCTTAAAGCTCCTCCACTGGAGACTGAAGGTGCTGAAGAGAAGGCTTGCA
rJMFF005M19+ CAATTGAATTGCTTAAAGCTCCTCCACTGGAGACTGAAGGTGCTGAAGAGAAGGCTTGCA
____________________________________________________________
consensus CAATTGAATTGCTTAAAGCTCCTCCACTGGAGACTGAAGGTGCTGAAGAGAAGGCTTGCA
. : . : . : . : . : . :
rJMFF015E11+ GAAGAGATATAATTGCCCTTGCGAGAGGGGGTTATGCAGAAACATTGTGTCTGCAACAGA
rJMFF035K02+ GAAGAGATATAATTGCCCTTGCGAGAGGTGGTTATGCAGAAACATTGTGTCTGCAACAGA
rJMFF005M19+ GAAGAGATATAATTGCCCTTGCGAGAGGTGGTTATGCAGAAACATTGTGTCTGCAACAGA
____________________________________________________________
consensus GAAGAGATATAATTGCCCTTGCGAGAGGTGGTTATGCAGAAACATTGTGTCTGCAACAGA
. : . : . : . : . : . :
rJMFF015E11+ ATAGAAAAGCCGAAGGGGAGAGAATAAAGCTTTGGGCAGAATCTGCCTGGAAAAATCCCA
rJMFF035K02+ ATAGAAAAGCCGAAGGGGAGAGAATAAAGCTTTGGGCAGAATCTGCCTGGAAAAATCCCA
rJMFF005M19+ ATAGAAAAGCCGAAGGGGAGAGAATAAAGCTTTGGGCAGAATCTGCCTGGAAAAATCCCA
____________________________________________________________
consensus ATAGAAAAGCCGAAGGGGAGAGAATAAAGCTTTGGGCAGAATCTGCCTGGAAAAATCCCA
. : . : . : . : . : . :
rJMFF015E11+ GATTATCCTTAGCTGAAGCACTGGAACCACCTTCTGAGTCTTCTTCCAAAGTGGCTGTTA
rJMFF035K02+ GATTATCCTTAGCTGAAGCACTGGAACCACCTTCTGAGTCTTCTTCCAAAGTGGCTGTTA
rJMFF005M19+ GATTATCCTTAGCTGAAGCACTGGAACCACCTTCTGAGTCTTCTTCCAAAGTGGCTGTTA
____________________________________________________________
consensus GATTATCCTTAGCTGAAGCACTGGAACCACCTTCTGAGTCTTCTTCCAAAGTGGCTGTTA
. : . : . : . : . : . :
rJMFF015E11+ TAGATACCAGAATATGCAGGGTCATTTAGATCATTTTTTTGTTTGTTTTCTTTTTTCTAT
rJMFF035K02+ TAGATACCAGAATATGCAGGGTCATTTAGATCATTTTTTTGTTTGTTTTCTTTTTTCTAT
rJMFF005M19+ TAGATACCAGAATATGCAGGGTCATTTAGATCATTTTTTTGTTTGTTTTCTTTTTTCTAT
____________________________________________________________
consensus TAGATACCAGAATATGCAGGGTCATTTAGATCATTTTTTTGTTTGTTTTCTTTTTTCTAT
. : . : . : . : . : . :
rJMFF015E11+ CGAAAAATAATGGAAATACAGAAAACATGTTCATCAGTATTTATTACAAGTCAGAAAAT
rJMFF035K02+ CGAAAAATAATGGAAATACAGAAAACATGTTCATCAGTATTTATTACAAGTCAGAAAAT
rJMFF005M19+ CGAAAAATAATGGAAATACAGAAAACATGTTCATCAGTATTTATTACAAGTCAGAAAATA
____________________________________________________________
consensus CGAAAAATAATGGAAATACAGAAAACATGTTCATCAGTATTTATTACAAGTCAGAAAATA