Contig 001024:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001A18Sequence384001605 (4)758001024 (4)gb|KDO75058.1|2e-96hypothetical protein CISIN_1g0164722mg [Citrus sinensis] gb|KDO75059.1| hypothet
JMFF003K09Sequence419001605 (4)ref|XP_006342737.1|3e-09PREDICTED: tubby-like F-box protein 6-like isoform X1 [Solanum tuberosum]757001024 (4)gb|KDO75058.1|4e-97hypothetical protein CISIN_1g0164722mg [Citrus sinensis] gb|KDO75059.1| hypothet
JMFF011J17Sequence468001605 (4)ref|XP_006342738.1|2e-14PREDICTED: tubby-like F-box protein 6-like isoform X2 [Solanum tuberosum]735001024 (4)gb|KDO75058.1|3e-97hypothetical protein CISIN_1g0164722mg [Citrus sinensis] gb|KDO75059.1| hypothet
JMFN037C09Sequence543001024 (4)gb|KDO75058.1|1e-89hypothetical protein CISIN_1g0164722mg [Citrus sinensis] gb|KDO75059.1| hypothet

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN037C09- TCAAAGGCAAGTGGCAATTATCTAGGAAAA
                      ____________________________________________________________
consensus TCAAAGGCAAGTGGCAATTATCTAGGAAAA
 
. : . : . : . : . : . :
JMFN037C09- TTGAGGTCGAATTTTCTCGGAACCAAGTTTACAGTGTATGATGCTTCACCGCCCGTTACA
                      ____________________________________________________________
consensus TTGAGGTCGAATTTTCTCGGAACCAAGTTTACAGTGTATGATGCTTCACCGCCCGTTACA
 
. : . : . : . : . : . :
JMFN037C09- AGAGCTAAAATGGTGAGAAGTCACAATACTAGCCCGGGGGCCTTGAAACATATCTT-CCC
rJMFF001A18+ ACAATACTAGCCCGGGGGCCTTGAAACATATCTTCCCC
rJMFF011J17+ ACTAGCCCGGGGGCCTTGAAACATATTTT-CCC
rJMFF003K09+ ACTAGCCCGGGGGCCTTGAAACATATCTT-CCC
                      ____________________________________________________________
consensus AGAGCTAAAATGGTGAGAAGTCACAATACTAGCCCGGGGGCCTTGAAACATATCTT-CCC
 
. : . : . : . : . : . :
JMFN037C09- TAGAGTACCCGTTGGAAACTATGAAGTTGCTTACATTTCATATGAGTTGAATGGACTTGC
rJMFF001A18+ TAGAGTACCCGTTGGAAACTATGAAGTTGCTCACATTTCATATGAGTTGAATGGACTTGC
rJMFF011J17+ TAGAGTACCCGTTGGAAACTATGAAGTTGCTCACATTTCATATGAGTTGAATGGACTTGC
rJMFF003K09+ TAGAGTACCCGTTGGAAACTATGAAGTTGCTCACATTTCATATGAGTTGAATGGACTTGC
                      ____________________________________________________________
consensus TAGAGTACCCGTTGGAAACTATGAAGTTGCTCACATTTCATATGAGTTGAATGGACTTGC
 
. : . : . : . : . : . :
JMFN037C09- AGCCAGGGGACCACGGAAAATGCAGTGTGTTATGGATACTATCCCCGCATCTTCGATTAA
rJMFF001A18+ AGCCAGGGGACCACGGAAAATGCAGTGTGTTATGGATACTATCCCCGCATCTTCGATTAA
rJMFF011J17+ AGCCAGGGGACCACGGAAAATGCAGTGTGTTATGGATACTATCCCCGCATCTTCGATTAA
rJMFF003K09+ AGCCAGGGGACCACGGAAAATGCAGTGTGTTATGGATACTATCCCCGCATCTTCGATTAA
                      ____________________________________________________________
consensus AGCCAGGGGACCACGGAAAATGCAGTGTGTTATGGATACTATCCCCGCATCTTCGATTAA
 
. : . : . : . : . : . :
JMFN037C09- ACCGGGAGGTGTAGCTCCCACGCAGACCGACTTTCCAATTTCGAGCGGTGATTCGTTTCC
rJMFF001A18+ ACCGGGAGGTGTAGCTCCCACGCAGACCGACTTTCCAATTTCGAGCGGTGATTCGTTTCC
rJMFF011J17+ ACCGGGAGGTGTAGCTCCCACGCAGACCGACTTTCCAATTTCGAGCGGTGATTCGTTTCC
rJMFF003K09+ ACCGGGAGGTGTAGCTCCCACGCAGACCGACTTTCCAATTTCGAGCGGTGATTCGTTTCC
                      ____________________________________________________________
consensus ACCGGGAGGTGTAGCTCCCACGCAGACCGACTTTCCAATTTCGAGCGGTGATTCGTTTCC
 
. : . : . : . : . : . :
JMFN037C09- AACAATACCCTTTTTCAGATCAAAATCAATGTGCTCGGAGAAACTCCTGTCCAGATCATC
rJMFF001A18+ AACAATACCCTTTTTCAGATCAAAATCAATGTGCTCGGAGAAACTCCTGTCCAGATCATC
rJMFF011J17+ AACAATACCCTTTTTCAGATCAAAATCAATGTGCTCGGAGAAACTCCTGTCCAGATCATC
rJMFF003K09+ AACAATACCCTTTTTCAGATCAAAATCAATGTGCTCGGAGAAACTCCTGTCCAGATCATC
                      ____________________________________________________________
consensus AACAATACCCTTTTTCAGATCAAAATCAATGTGCTCGGAGAAACTCCTGTCCAGATCATC
 
. : . : . : . : . : . :
JMFN037C09- GGAGAGGCAAACGGATGGATCGCTAGTTTTAAGAAACAAGGCTCCCAGATGGCACGAGCA
rJMFF001A18+ GGAGAGGCAAACGGATGGATCGCTAGTTTTAAGAAACAAGGCTCCCAGATGGCACGAGCA
rJMFF011J17+ GGAGAGGCAAACGGATGGATCGCTAGTTTTAAGAAACAAGGCTCCCAGATGGCACGAGCA
rJMFF003K09+ GGAGAGGCAAACGGATGGATCGCTAGTTTTAAGAAACAAGGCTCCCAGATGGCACGAGCA
                      ____________________________________________________________
consensus GGAGAGGCAAACGGATGGATCGCTAGTTTTAAGAAACAAGGCTCCCAGATGGCACGAGCA
 
. : . : . : . : . : . :
JMFN037C09- GCTCCAGTGCTGGTGCCTAAACTTTCATGGACGGGTAACCGTTGCTTCGGTGAAAAACTT
rJMFF001A18+ GCTCCAGTGCTGGTGCCTAAACTTTCATGGACGGGTAACCGTTGCTTCGGTGAAAAACTT
rJMFF011J17+ GCTCCAGTGCTGGTGCCTAAACTTTCATGGACGGGTAACCGTTGCTTCGGTGAAAAACTT
rJMFF003K09+ GCTCCAGTGCTGGTGCCTAAACTTTCATGGACGGGTAACCGTTGCTTCGGTGAAAAACTT
                      ____________________________________________________________
consensus GCTCCAGTGCTGGTGCCTAAACTTTCATGGACGGGTAACCGTTGCTTCGGTGAAAAACTT
 
. : . : . : . : . : . :
JMFN037C09- TCAGTTGGTAGCTTCTCCCGAGAATGGGGTGGCG
rJMFF001A18+ TCAGTTGGTAGCTTCTCCCGAGAATGGGGTGGCGGTGCCCGAATGTGAGAAGGTCATTCT
rJMFF011J17+ TCAGTTGGTAGCTTCTCCCGAGAATGGGGTGGCGGTGCCCGAATGTGAGAAGGTCATTCT
rJMFF003K09+ TCAGTTGGTAGCTTCTCCCGAGAATGGGGTGGCGGTGCCCGAATGTGAGAAGGTCATTCT
                      ____________________________________________________________
consensus TCAGTTGGTAGCTTCTCCCGAGAATGGGGTGGCGGTGCCCGAATGTGAGAAGGTCATTCT
 
. : . : . : . : . : . :
rJMFF001A18+ ACAGTTCGGGAAAGTAGCGAAGGATGTCTTCACAATGGATTTCCGCTACCCGTTATCGCC
rJMFF011J17+ ACAGTTCGGGAAAGTAGCGAAGGATGTCTTCACAATGGATTTCCGCTACCCGTTATCGCC
rJMFF003K09+ ACAGTTCGGGAAAGTAGCGAAGGATGTCTTCACAATGGATTTCCGCTACCCGTTATCGCC
                      ____________________________________________________________
consensus ACAGTTCGGGAAAGTAGCGAAGGATGTCTTCACAATGGATTTCCGCTACCCGTTATCGCC
 
. : . : . : . : . : . :
rJMFF001A18+ ATTTCTTGCATTTGCCATCTGTCTTAGCAACTTCGACTCCAAGTTAGCTTGTGAATAACG
rJMFF011J17+ ATTTCTTGCATTTGCCATCTGTCTTAGCAACTTCGACTCCAAGTTAGCTTGTGAATAACG
rJMFF003K09+ ATTTCTTGCATTTGCCATCTGTCTTAGCAACTTCGACTCCAAGTTAGCTTGTGAATAACG
                      ____________________________________________________________
consensus ATTTCTTGCATTTGCCATCTGTCTTAGCAACTTCGACTCCAAGTTAGCTTGTGAATAACG
 
. : . : . : . : . : . :
rJMFF001A18+ AGGATTGGGAGGGGTAAAGATGAGATTGTATCACTCTGCTATTATCTTCTGCACTGGACT
rJMFF011J17+ AGGATTGGGAGGGGTAAAGATGAGATTGTATCACTCTGCTATTATCTTCTGCACTGGACT
rJMFF003K09+ AGGATTGGGAGGGGTAAAGATGAGATTGTATCACTCTGCTATTATCTTCTGCACTGGACT
                      ____________________________________________________________
consensus AGGATTGGGAGGGGTAAAGATGAGATTGTATCACTCTGCTATTATCTTCTGCACTGGACT
 
. : . : . : . : . : . :
rJMFF001A18+ TCTTAATAATGGTGGAAACTGGAAAGTAGGGTAACCTTTACTACTGTAAATTCTTCCTTG
rJMFF011J17+ TCTTAATAATGGTGGAAACTGGAAAGTAGGGTAACCTTTACTACTGTAAATTCTTCCTTG
rJMFF003K09+ TCTTAATAATGGTGGAAACTGGAAAGTAGGGTAACCTTTACTACTGTAAATTCTTCCTTG
                      ____________________________________________________________
consensus TCTTAATAATGGTGGAAACTGGAAAGTAGGGTAACCTTTACTACTGTAAATTCTTCCTTG
 
. : . : . : . : . : . :
rJMFF001A18+ TATATATACTCTGCTCCCCTTTTTCTT
rJMFF011J17+ TATATATACTCTGCTCCCCTTTTTCTT
rJMFF003K09+ TATATATACTCTGCTCCCCTTTTTCTTTGAAGTTGTGAAGATAATTTTCGGTTTCGCCAC
                      ____________________________________________________________
consensus TATATATACTCTGCTCCCCTTTTTCTTTGAAGTTGTGAAGATAATTTTCGGTTTCGCCAC