Contig 001012:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS008G06Sequence641001012 (4)ref|XP_006342104.1|3e-68PREDICTED: large proline-rich protein BAG6-like isoform X1 [Solanum tuberosum]
JMFS022E08Sequence635001012 (4)ref|XP_006342104.1|1e-57PREDICTED: large proline-rich protein BAG6-like isoform X1 [Solanum tuberosum]
JMSF008J18Sequence398001012 (4)ref|XP_004238408.1|1e-20PREDICTED: large proline-rich protein BAG6 isoform X2 [Solanum lycopersicum]763012381 (7)ref|XP_009606359.1|1e-60PREDICTED: casein kinase I isoform delta-like [Nicotiana tomentosiformis]
JMSF052N15Sequence669001012 (4)ref|XP_006342105.1|1e-58PREDICTED: large proline-rich protein BAG6-like isoform X2 [Solanum tuberosum]900015194ref|XP_009762566.1|3e-64PREDICTED: large proline-rich protein BAG6 isoform X3 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS008G06+ GCCTTCTGCTGCTTCATTTCCTTGTGAAGCAAAA
                      ____________________________________________________________
consensus GCCTTCTGCTGCTTCATTTCCTTGTGAAGCAAAA
 
. : . : . : . : . : . :
JMFS008G06+ GTGGGAGCAGTAACCTGCACGCCAGGATGTTGGCCACCAATCTGGCTCCCAATTCCAACA
JMFS022E08+ CA
JMSF052N15+ CA
                      ____________________________________________________________
consensus GTGGGAGCAGTAACCTGCACGCCAGGATGTTGGCCACCAATCTGGCTCCCAATTCCAACA
 
. : . : . : . : . : . :
JMFS008G06+ GAGTTTAAAACTGCCCCAATAACCCGACTTAGATCGGGAACAAGACCGCCTCCTTGATCA
JMFS022E08+ GAGTTTAAAACTGCCCCAATAACCCGACTTAGATCGGGAACAAGACCGCCTCCTTGATCA
JMSF052N15+ GAGTTTAAAACTGCCCCAATAACCCGACTTAGATCGGGAACAAGACCGCCTCCTTGATCA
                      ____________________________________________________________
consensus GAGTTTAAAACTGCCCCAATAACCCGACTTAGATCGGGAACAAGACCGCCTCCTTGATCA
 
. : . : . : . : . : . :
JMFS008G06+ CCAACATTGAAAGTGCCTAGCATAACACTATGCGAAATTTGCCCAATTTGGCTGCGTGAG
JMFS022E08+ CCAACATTGAAAGTGCCTAGCATAACACTATGCGAAATTTGCCCAATTCGGCTGCGTGAG
JMSF052N15+ CCAACATTGAAAGTGCCTAGCATAACACTATGCGAAATTTGCCCAATTCGGCTGCGTGAG
                      ____________________________________________________________
consensus CCAACATTGAAAGTGCCTAGCATAACACTATGCGAAATTTGCCCAATTCGGCTGCGTGAG
 
. : . : . : . : . : . :
JMFS008G06+ GCACCAGTGGTTGGATCTTGTCCATTAGGTGCAGTAGCCTCTGTAGTGTTGGAACCAGAT
JMFS022E08+ GCACCAGTGGTTGGATCTTGTCCATTAGGTGCAGTAGCCTCTGTAGTGTTGGAACCAGAT
JMSF052N15+ GCACCAGTGGTTGGATCTTGTCCATTAGGTGCAGTAGCCTCTGTAGTGTTGGAACCAGAT
                      ____________________________________________________________
consensus GCACCAGTGGTTGGATCTTGTCCATTAGGTGCAGTAGCCTCTGTAGTGTTGGAACCAGAT
 
. : . : . : . : . : . :
JMFS008G06+ GAGGATTGTTGCTGGGACAGCTCTCTTACCAAGTGCAATGCATCCCCATTCTCCAAATGA
JMFS022E08+ GAGGATTGTTGCTGGGACAGCTCTCTTACCAAGTGCAATGCATCCCCATTCTCCAAATGA
JMSF052N15+ GAGGATTGTTGCTGGGACAGCTCTCTTACCAAGTGCAATGCATCCCCATTCTCCAAATGA
                      ____________________________________________________________
consensus GAGGATTGTTGCTGGGACAGCTCTCTTACCAAGTGCAATGCATCCCCATTCTCCAAATGA
 
. : . : . : . : . : . :
JMFS008G06+ TATTCTGAAAGGAGGTGGCCATCCTTCAAAACCTTCCCCCGAAAAATAAGCCTCTGCTGT
JMFS022E08+ TATTCTGAAAGGAGGTGGCCATCCTTCAAAACCTTCCCCCGAAAAATAAGCCTCTGCTGT
JMSF008J18+ TCCTTCAAANCCTTCCCCCGAAAAATAAGCNTCTGCTGT
JMSF052N15+ TATTCTGAAAGGAGGTGGCCATCCTTCAAAACCTTCCCCCGAAAAATAAGCCTCTGCTGT
                      ____________________________________________________________
consensus TATTCTGAAAGGAGGTGGCCATCCTTCAAAACCTTCCCCCGAAAAATAAGCCTCTGCTGT
 
. : . : . : . : . : . :
JMFS008G06+ ACTACAGGGACACCAGTTTGAGCAGCTACTTTCTCCTTCAAGGCAGAAACTTGAATATTC
JMFS022E08+ ACTACAGGGACACCAGTTTGAGCAGCTACTTTCTCCTTCAAGGCAGAAACTTGAATATTC
JMSF008J18+ ACTACAGGGACACCAGTTTGAGCAGCTACTTTCTCCTTCAAGGCAGAAACTTGAATATTC
JMSF052N15+ ACTACAGGGACACCAGTTTGAGCAGCTACTTTCTCCTTCAAGGCAGAAACTTGAATATTC
                      ____________________________________________________________
consensus ACTACAGGGACACCAGTTTGAGCAGCTACTTTCTCCTTCAAGGCAGAAACTTGAATATTC
 
. : . : . : . : . : . :
JMFS008G06+ TTGTCCACATGGAAAACATGATTCTGCGAATCTAAGGTCTTGATATTGATCTTAATTGAT
JMFS022E08+ TTGTCCACATGGAAAACATGATTCTGCGAATCTAAGGTCTTGATATTGATCTTAATTGAT
JMSF008J18+ TTGTCCACATGGAAAACATGATTCTGCGAATCTAAGGTCTTGATATTGATCTTAATTGAT
JMSF052N15+ TTGTCCACATGGAAAACATGATTCTGCGAATCTAAGGTCTTGATATTGATCTTAATTGAT
                      ____________________________________________________________
consensus TTGTCCACATGGAAAACATGATTCTGCGAATCTAAGGTCTTGATATTGATCTTAATTGAT
 
. : . : . : . : . : . :
JMFS008G06+ GATTCAGAAACTCCTCCAGAAGCATTGCTTGTGTTTGGATCCGCAGATGGATGCTGGTCT
JMFS022E08+ GATTCAGAAACTCCTCCAGAAGCATTGCTTGTGTTTGGATCCGCAGATGGATGCTGGTCT
JMSF008J18+ GATTCAGAAACTCCTCCAGAAGCATTGCTTGTGTTTGGATCCGCAGATGGATGCTGGTCT
JMSF052N15+ GATTCAGAAACTCCTCCAGAAGCATTGCTTGTGTTTGGATCCGCAGATGGATGCTGGTCT
                      ____________________________________________________________
consensus GATTCAGAAACTCCTCCAGAAGCATTGCTTGTGTTTGGATCCGCAGATGGATGCTGGTCT
 
. : . : . : . : . : . :
JMFS008G06+ GCCATGTAGCTTGAAAAGAATTAATGCCTATACAGGAGAGGAGAGAAGATCGAAGACTGA
JMFS022E08+ GCCATGTAGCTTGAAAAGAATTAATGCCTATACAGGAGAGGAGAGAAGATCGAAGACTGA
JMSF008J18+ GCCATGTAGCTTGAAAAGAATTAATGCCTATACAGGAGAGGAGAGAAGATCGAAGACTGA
JMSF052N15+ GCCATGTAGCTTGAAAAGAATTAATGCCTATACAGGAGAGGAGAGAAGATCGAAGACTGA
                      ____________________________________________________________
consensus GCCATGTAGCTTGAAAAGAATTAATGCCTATACAGGAGAGGAGAGAAGATCGAAGACTGA
 
. : . : . : . : . : . :
JMFS008G06+ AGCGCGA
JMFS022E08+ AGCGCGATTGATATTTTCGTTCAAACACTAAAACGTAACCAACCAGATTTTTGACGTAGA
JMSF008J18+ AGCGCGATTGATATTTTCGTTCAAACACTAAAACGTAACCAACCAGATTTTTGACGTAGA
JMSF052N15+ AGCGCGATTGATATTTTCGTTCAAACACTAAAACGTAACCAACCAGATTTTTGACGTAGA
                      ____________________________________________________________
consensus AGCGCGATTGATATTTTCGTTCAAACACTAAAACGTAACCAACCAGATTTTTGACGTAGA
 
. : . : . : . : . : . :
JMFS022E08+ GAAAGGGCAAGAGGAGAAATGTGCTGCAGCGAC
JMSF008J18+ GAAAGGGCAAGAGGAGAAATGTGCTGCAGCGACTCTCGTCTGCTTCAAGGAAATCGCCC
JMSF052N15+ GAAAGGGCAAGAGGAGAAATGTGCTGCAGCGACTCTCGTCTGCTTCAAGGAAATCGCCCC
                      ____________________________________________________________
consensus GAAAGGGCAAGAGGAGAAATGTGCTGCAGCGACTCTCGTCTGCTTCAAGGAAATCGCCCC