Contig 001007:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF043I13+                                                  TCTTTGTGACATCACGGCGAA
                      ____________________________________________________________
consensus                                                    TCTTTGTGACATCACGGCGAA
 
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JMSF043I13+           CGCCAATATCAGAAACGAACCGGCTGAGGCAATATATGGTGCATCCCATGGCTGCCAGAC
                      ____________________________________________________________
consensus             CGCCAATATCAGAAACGAACCGGCTGAGGCAATATATGGTGCATCCCATGGCTGCCAGAC
 
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JMSF043I13+           CCGGGAAGCTGTTAGTCATGAAGCGAAGCGGGGAGGAGACCACGGCGGTGGCAGCAGCTA
JMSF052B06+                        AGTCATGAAGCGAAGCGGGGAGGAGACCACGGCGGTGGCAGCAGCTA
                      ____________________________________________________________
consensus             CCGGGAAGCTGTTAGTCATGAAGCGAAGCGGGGAGGAGACCACGGCGGTGGCAGCAGCTA
 
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JMSF043I13+           GAAACGAGGTTGCTTGTCCGCTACGGCCTACACTGACATTAGTGAAGACCAGCAGACCTG
JMSF052B06+           GAAACGAGGTTGCTTGTCCGNTACGGCCTACACTGACATTAGTGAAGACCAGCAGACCTG
                      ____________________________________________________________
consensus             GAAACGAGGTTGCTTGTCCGCTACGGCCTACACTGACATTAGTGAAGACCAGCAGACCTG
 
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JMSF043I13+           TCTTGCAGTAGATTGCGAAGTCCTCACAGTTGTTCTTGAACAGGCTGTAAATGCCAAAGC
JMSF052B06+           TCTTGCAGTAGATTGCGAAGTCCTCACAGTTGTTCTTGAACAGGCTGTAAATGCCAAAGC
                      ____________________________________________________________
consensus             TCTTGCAGTAGATTGCGAAGTCCTCACAGTTGTTCTTGAACAGGCTGTAAATGCCAAAGC
 
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JMSF043I13+           CGTTTTGGAGGAGGAACTCAGCGCGGTGGAGGACGTGGTCGGGTGGATCTGAGGGGGCGA
JMSF052B06+           CGTTTTGGAGGAGGAACTCAGCGCGGTGGAGGACGTGGTCGGGTGGATCTGAGGGGGCGA
                      ____________________________________________________________
consensus             CGTTTTGGAGGAGGAACTCAGCGCGGTGGAGGACGTGGTCGGGTGGATCTGAGGGGGCGA
 
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JMSF043I13+           GCGTGCACGTTCCTCCTCGAGCTTTGGCGATGAATAGAGCCGGAGAAACACCGTACTGAA
JMSF052B06+           GCGTGCACGTTCCTCCTCGAGCTTTGGCGATGAATAGAGCCGGAGAAACACCGTACTGAA
                      ____________________________________________________________
consensus             GCGTGCACGTTCCTCCTCGAGCTTTGGCGATGAATAGAGCCGGAGAAACACCGTACTGAA
 
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JMSF043I13+           ACAGATATAGTTCGCCACCAGAAAGAAAGCATTCGAGGCAGGATGAGATGACACCTTCAG
JMSF052B06+           ACAGATATAGTTCGCCACCAGAAAGAAAGCATTCGAGGCAGGATGAGATGACACCTTCAG
                      ____________________________________________________________
consensus             ACAGATATAGTTCGCCACCAGAAAGAAAGCATTCGAGGCAGGATGAGATGACACCTTCAG
 
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JMSF043I13+           CTGAGACTTGATTGCCACATCTTGGGCATGGGGAGTCTGAGGCATGGGAAGGAGATGCGC
JMSF052B06+           CTGAGACTTGATTGCCACATCTTGGGCATGGGGAGTCTGAGGCATGGGAAGGAGATGCGC
                      ____________________________________________________________
consensus             CTGAGACTTGATTGCCACATCTTGGGCATGGGGAGTCTGAGGCATGGGAAGGAGATGCGC
 
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JMSF043I13+           TGAAAATGAAGCGGTCTAGTGAAGTTCCTGTCCCGATTTCCTGACCTGCAGCTCGCGTGA
JMSF052B06+           TGAAAATGAAGCGGTCTAGTGAAGTTCCTGTCCCGATTTCCTGACCTGCAGCTCGCGTGA
                      ____________________________________________________________
consensus             TGAAAATGAAGCGGTCTAGTGAAGTTCCTGTCCCGATTTCCTGACCTGCAGCTCGCGTGA
 
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JMSF043I13+           AGTGGATTACCTTACCATCGCCAACATATATCCCGTGATGAGCGTAGAGGTATTTGTGCC
JMSF052B06+           AGTGGATTACCTTACCATCGCCAACATATATCCCGTGATGAGCGTAGAGGTATTTGTGCC
                      ____________________________________________________________
consensus             AGTGGATTACCTTACCATCGCCAACATATATCCCGTGATGAGCGTAGAGGTATTTGTGCC
 
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JMSF043I13+           GCCAGGAGTAAATGTGATCGCCGGGCTTCAGTTCATCTATTCCGATCTTGTTCGAAAGAA
JMSF052B06+           GCCAGGAGTAAATGTGATCGCCGGGCTTCAGTTCATCTATTCCGATCTTGTTCGAAAGAA
                      ____________________________________________________________
consensus             GCCAGGAGTAAATGTGATCGCCGGGCTTCAGTTCATCTATTCCGATCTTGTTCGAAAGAA
 
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JMSF043I13+           CTCCGACCATCGCTCCTTCGCCGTCGAAACCACCGACTCCGGCGTCGCTCTCTGCTTTTA
JMSF052B06+           CTCCGACCATCGCTCCTTCGCCGTCGAAACCACCGGCTCCGGCGTCGCTCTCTGCTTTTA
                      ____________________________________________________________
consensus             CTCCGACCATCGCTCCTTCGCCGTCGAAACCACCGGCTCCGGCGTCGCTCTCTGCTTTTA
 
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JMSF043I13+           CAATCGGAAAATGAAGTTGATGGAACACCGGGCTTCAATTTGCTTATTCAG         
JMSF052B06+           CAATCGGAAAATGAAGTTGATGGAACACCGGGCTTCAATTTGCTTATTCAGTAAGATTTC
                      ____________________________________________________________
consensus             CAATCGGAAAATGAAGTTGATGGAACACCGGGCTTCAATTTGCTTATTCAGTAAGATTTC