Contig 000998:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010P05Sequence555000998 (8)705002579 (7)ref|XP_009598097.1|6e-12PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Nicotiana tomentosiform
JMFF015P02Sequence590000998 (8)758002579 (7)ref|XP_009588928.1|5e-17PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Nicotiana tomentosiform
JMFF017I02Sequence554000998 (8)641002579 (7)ref|XP_009598097.1|6e-12PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Nicotiana tomentosiform
JMFF021F10Sequence551000998 (8)634002579 (7)ref|XP_009598097.1|7e-12PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Nicotiana tomentosiform
JMFF021N10Sequence460000998 (8)349002579 (7)ref|XP_009588928.1|1e-08PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Nicotiana tomentosiform
JMFF048K01Sequence598000998 (8)
JMSF004K03Sequence391000998 (8)440007045 (3)ref|XP_009609403.1|6e-55PREDICTED: ABC transporter G family member 32-like [Nicotiana tomentosiformis]
JMSF050G04Sequence631000998 (8)729002579 (7)ref|XP_009588928.1|2e-28PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Nicotiana tomentosiform

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF050G04+ CGCCGCCGCCGCCGCCGCCGCCACCTTCTTC
                      ____________________________________________________________
consensus CGCCGCCGCCGCCGCCGCCGCCACCTTCTTC
 
. : . : . : . : . : . :
JMFF015P02+ CTCATCAACACCTTCCATCATTGACCGGAACTCCCTACCGTAAACATCTAAGGAATCAGA
JMFF048K01+ CTCATCAACACCTTCCATCATTGACCGGAACTCCCTACCGTAAACATCTAAGGAATCAGA
JMFF017I02+ ATCTAAGGAATCAGA
JMFF010P05+ CATCTAAGGAATCAGA
JMFF021F10+ AACATCTAAGGAATCAGA
JMSF050G04+ CTCATCAACACCTTCCATCATTGACCGGAACTCCCTACCGTAAACATCTAAGGAATCAGA
                      ____________________________________________________________
consensus CTCATCAACACCTTCCATCATTGACCGGAACTCCCTACCGTAAACATCTAAGGAATCAGA
 
. : . : . : . : . : . :
JMFF015P02+ GCCTCCAAGTGATGATCTCTTCATGGCTGGTTGTTCTGATCTGCTGACAAAATTCCAATC
JMFF048K01+ GCCTCCAAGTGATGA--TCTTCATGGCTGGTTGTTCTGATCTGCTGACAAAATTCCAATC
JMFF017I02+ GCCTCCAAGTGATGATCTCTTCATGGCTGGTTGTTCTGATCTGCTGACAAAATTCCAATC
JMFF021N10+ GATCTGCTGACAAAATTCCAATC
JMFF010P05+ GCCTCCAAGTGATGATCTCTTCATGGCTGGTTGTTCTGATCTGCTGACAAAATTCCAATC
JMFF021F10+ GCCTCCAAGTGATGATCTCTTCATGGCTGGTTGTTCTGATCTGCTGACAAAATTCCAATC
JMSF050G04+ GCCTCCAAGTGATGATCTCTTCATGGCTGGTTGTTCTGATCTGCTGACAAAATTCCAATC
                      ____________________________________________________________
consensus GCCTCCAAGTGATGATCTCTTCATGGCTGGTTGTTCTGATCTGCTGACAAAATTCCAATC
 
. : . : . : . : . : . :
JMFF015P02+ TTTTTACTGAAACTTCTGGGGAATCTTTCAAGAACTTTGGGCTGTTGTTCTTGGACTGTA
JMFF048K01+ TTTTTACTGAAACTTCTGGGGAATCTTTCAAGAACTTTGGGCTGTTGTTCTTGGACTGTA
JMFF017I02+ TTTTTACTGAAACTTCTGGGGAATCTTTCAAGAACTTTGGGCTGTTGTTCTTGGACTGTA
JMFF021N10+ TTTTTACTGAAACTTCTGGGGAATCTTTCAAGAACTTTGGGCTGTTGTTCTTGGACTGTA
JMFF010P05+ TTTTTACTGAAACTTCTGGGGAATCTTTCAAGAACTTTGGGCTGTTGTTCTTGGACTGTA
JMFF021F10+ TTTTTACTGAAACTTCTGGGGAATCTTTCAAGAACTTTGGGCTGTTGTTCTTGGACCGTA
JMSF050G04+ TTTTTACTGAAACTTCTGGGGAATCTTTCAAGAACTTTGGGCTGTTGTTCTTGGACTGTA
                      ____________________________________________________________
consensus TTTTTACTGAAACTTCTGGGGAATCTTTCAAGAACTTTGGGCTGTTGTTCTTGGACTGTA
 
. : . : . : . : . : . :
JMFF015P02+ GTAATGAAGAAGAAGAAGAAGAAGATGATGATGATCAAGAACAGTTCAGAAAAGAAAGCA
JMFF048K01+ GTAATGAAGAAGAAGAAGAAGAAGATGATGATGATCAAGAACAGTTCAGAAAAGAAAGCA
JMFF017I02+ GTAATGAAGAAGAAGAAGAAGAAGATGATGATGATCAAGAACAGTTCAGAAAAGAAAGCA
JMFF021N10+ GTAATGAAGAAGAAGAAGAAGAAGATGATGATGATCAAGAACAGTTCAGAAAAGAAAGCA
JMSF004K03+ GAAGATGATGATGATCAAGANCAGTTCAGAAAAGAAAGCA
JMFF010P05+ GTAATGAAGAAGAAGAAGAAGAAGATGATGATGATCAAGAACAGTTCAGAAAAGAAAGCA
JMFF021F10+ GTAATGAAGAAGAAGAAGAAGAAGATGATGATGATCAAGAACAGTTCAGAAAAGAAAGCA
JMSF050G04+ GTAATGAAGAAGAAGAAGAAGAAGATGATGATGATCAAGAACAGTTCAGAAAAGAAAGCA
                      ____________________________________________________________
consensus GTAATGAAGAAGAAGAAGAAGAAGATGATGATGATCAAGAACAGTTCAGAAAAGAAAGCA
 
. : . : . : . : . : . :
JMFF015P02+ AGCTGGGAAACAAGTCATCATGACTCATGAGAACCCCTTTTCACATCTTTTAAGCACAAA
JMFF048K01+ AGCTGGGAAACAAGTCATCATGACTCATGAGAACCCCTTTTCACATCTTTTAAGCACAAA
JMFF017I02+ AGCTGGGAAACAAGTCATCATGACTCATGAGAACCCCTTTTCACATCTTTTAAGCACAAA
JMFF021N10+ AGCTGGGAAACAAGTCATCATGACTCATGAGAACCCCTTTTCACATCTTTTAAGCACAAA
JMSF004K03+ AGCTGGGAAACAAGTCATCATGACTCATGAGAACCCCTTTTCACATCTTTTAAGCACAAA
JMFF010P05+ AGCTGGGAAACAAGTCATCATGACTCATGAGAACCCCTTTTCACATCTTTTAAGCACAAA
JMFF021F10+ AGCTGGGAAACAAGTCATCATGACTCATGAGAACCCCTTTTCACATCTTTTAAGCACAAA
JMSF050G04+ AGCTGGGAAACAAGTCATCATGACTCATGAGAACCCCTTTTCACATCTTTTAAGCGCAAA
                      ____________________________________________________________
consensus AGCTGGGAAACAAGTCATCATGACTCATGAGAACCCCTTTTCACATCTTTTAAGCACAAA
 
. : . : . : . : . : . :
JMFF015P02+ AACTCCATTTTTGTACTTGTTAGGTGGCACCATTACTGCTAGTTTAGTTCAGTTCATCCA
JMFF048K01+ AACTCCATTTTTGTACTTGTTAGGTGGCACCATTACTGCTAGTTTAGTTCAGTTCATCCA
JMFF017I02+ AACTCCATTTTTGTACTTGTTAGGTGGCACCATTACTGCTAGTTTAGTTCAGTTCATCCA
JMFF021N10+ AACTCCATTTTTGTACTTGTTAGGTGGCACCATTACTGCTAGTTTAGTTCAGTTCATCCA
JMSF004K03+ AACTCCATTTTTGTACTTGTTAGGTGGCACCATTACTGCTAGTTTAGTTCAGTTCATCCA
JMFF010P05+ AACTCCATTTTTGTACTTGTTAGGTGGCACCATTACTGCTAGTTTAGTTCAGTTCATCCA
JMFF021F10+ AACCCCATTTTTGTACTTGTTAGGTGGCACCATTACTGCTAGTTTAGTTCAGTTCATCCA
JMSF050G04+ AACTCCATTTTTGTACTTGTTAGGTGGCACCATTACTGCTAGTTTAGTTCAGTTCATCCA
                      ____________________________________________________________
consensus AACTCCATTTTTGTACTTGTTAGGTGGCACCATTACTGCTAGTTTAGTTCAGTTCATCCA
 
. : . : . : . : . : . :
JMFF015P02+ CCTATGAACCCACCAAGAACAAGCAAAACCCAATAATGCAGAAAGGGAATAATGGAATGA
JMFF048K01+ CCTATGAACCCACCAAGAACAAGCAAAACCCAATAATGCAGAAAGGGAATAATGGAATGA
JMFF017I02+ CCTATGAACCCACCAAGAACAAGCAAAACCCAATAATGCAGAAAGGGAATAATGGAATGA
JMFF021N10+ CCTATGAACCCACCAAGAACAAGCAAAACCCAATAATGCAGAAAGGGAATAATGGAATGA
JMSF004K03+ CCTATGAACCCACCAAGAACAAGCAAAACCCAATAATGCAGAAAGGGAATAATGGAATGA
JMFF010P05+ CCTATGAACCCACCAAGAACAAGCAAAACCCAATAATGCAGAAAGGGAATAATGGAATGA
JMFF021F10+ CCTATGAACCCACCAAGAACAAGCAAAACCCAATAATGCAGAAAGGGAATAATGGAATGA
JMSF050G04+ CCTATGAACCCACCAAGAACAAGCAAAACCCAATAATGCAGAAAGGGAATAATGGAATGA
                      ____________________________________________________________
consensus CCTATGAACCCACCAAGAACAAGCAAAACCCAATAATGCAGAAAGGGAATAATGGAATGA
 
. : . : . : . : . : . :
JMFF015P02+ TGGAAGCAAAACTGGGGAAAATGTCTCCTCTTTCTCTCCAAACATTTCCATGCTTACATC
JMFF048K01+ TGGAAGCAAAACTGGGGAAAATGTCTCCTCTTTCTCTCCAAACATTTCCATGCTTACATC
JMFF017I02+ TGGAAGCAAAACTGGGGAAAATGTCTCCTCTTTCTCTCCAAACATTTCCATGCTTACATC
JMFF021N10+ TGGAAGCAAAACTGGGGAAAATGTCTCCTCTTTCTCTCCAAACACTTCCATGCTTACATC
JMSF004K03+ TGGAAGCAAAACTGGGGAAAATGTCTCCTCTTTCTCTCCAAACATTTCCATGCTTACATC
JMFF010P05+ TGGAAGCAAAACTGGGGAAAATGTCTCCTCTTTCTCTCCAAACATTTCCATGCTTACATC
JMFF021F10+ TGGAAGCAAAACTGGGGAAAATGTCTCCTCTTTCTCTCCAAACATTTCCATGCTTACATC
JMSF050G04+ TGGAAGCAAAACTGGGGAAAATGTCTCCTCTTTCTCTCCAAACATTTCCATGCTTACATC
                      ____________________________________________________________
consensus TGGAAGCAAAACTGGGGAAAATGTCTCCTCTTTCTCTCCAAACATTTCCATGCTTACATC
 
. : . : . : . : . : . :
JMFF015P02+ ATTAGTTGTTGTTAGAACACAGGCTTAGGTCAGAAGACTCTCAGAGCTGTTCATCTACAA
JMFF048K01+ ATTAGTTGTTGTTAGAACACAGGCTTAGGTCAGAAGACTCTCAGAGCTGTTCATCTACAA
JMFF017I02+ ATTAGTTGTTGTTAGAACACAGGCTTAGGTCAGAAGACTCTCAGAGCTGTTCATCTACAA
JMFF021N10+ ATTAGTTGTTGTTAGAACACAGGCTTAGGTCAGAAGACTCTCAGAGCTGTTCATCTACAA
JMSF004K03+ ATTAGTTGTTGTTAGAACACAGGCTTAGGTCAGAAGACTCTCAGAGCTGTTCATCTACAA
JMFF010P05+ ATTAGTTGTTGTTAGAACACAGGCTTAGGTCAGAAGACTCTCAGAGCTGTTCATCTACAA
JMFF021F10+ ATTAGTTGTTGTTAGAACACAGGCTTAGGTCAGAAGACTCTCAGAGCTGTTCATCTACAA
JMSF050G04+ ATTAGTTGTTGTTAGAACACAGGCTTAGGTCAGAAGACTCTCAGAGCTGTTCATCTACAA
                      ____________________________________________________________
consensus ATTAGTTGTTGTTAGAACACAGGCTTAGGTCAGAAGACTCTCAGAGCTGTTCATCTACAA
 
. : . : . : . : . : . :
JMFF015P02+ GAAGAAGAGTAGAGGACAGGGAAACAAGAAGAAGAAGAAGGAGAGAGCTT
JMFF048K01+ GAAGAAGAGTAGAGGACAGGGAAACAAGAAGAAGAAGAAGGAGAGAGCCTAAT
JMFF017I02+ GAAGAAGAGTAGAGGACAGGGAAACAAGAAGAAGAAGAAGGAGAGAGCTTAAT
JMFF021N10+ GAAGAAGAGTAGAG
JMSF004K03+ GAAGAAGAGTAGAGGACAGGGAAACAAGAAGAAGAAGAAGGAGAGAGC
JMFF010P05+ GAAGAAGAGTAGAGGACAGGGAAACAAGAAGAAGAAGAAGGAGAGAGCTTAAT
JMFF021F10+ GAAGAAGAGTAGAGGACAGGGAAACAAGAAGAAGAAGAAGGAGAGAGCTTAAT
JMSF050G04+ GAAGAAGAGTAGAGGACAGGGAAACAAGAAGAAGAAGAAGGAGAGAGCTTAATGGACTTC
                      ____________________________________________________________
consensus GAAGAAGAGTAGAGGACAGGGAAACAAGAAGAAGAAGAAGGAGAGAGCTTAATGGACTTC