| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN036D06 | Sequence | 496 | 000994 (6) | ref|XP_006339675.1| | 122 | PREDICTED: uncharacterized protein LOC102599207 [Solanum tuberosum] | |||||
| JMFS081D09 | Sequence | 621 | 000994 (6) | ref|XP_010692517.1| | 144 | PREDICTED: uncharacterized protein LOC104905624 [Beta vulgaris subsp. vulgaris] | |||||
| JMFS082A05 | Sequence | 614 | 000994 (6) | ref|XP_010692517.1| | 140 | PREDICTED: uncharacterized protein LOC104905624 [Beta vulgaris subsp. vulgaris] | |||||
| JMFS136A01 | Sequence | 593 | 000994 (6) | ref|XP_010692517.1| | 127 | PREDICTED: uncharacterized protein LOC104905624 [Beta vulgaris subsp. vulgaris] | |||||
| JMSF050C12 | Sequence | 508 | 000994 (6) | ref|XP_006339675.1| | 127 | PREDICTED: uncharacterized protein LOC102599207 [Solanum tuberosum] | 471 | 000994 (6) | ref|XP_006339675.1| | 124 | PREDICTED: uncharacterized protein LOC102599207 [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
JMFS082A05+ TCATC
JMFS081D09+ GCGATCCTCATC
____________________________________________________________
consensus GCGATCCTCATC
. : . : . : . : . : . :
JMFS082A05+ TTCAATTATAACATCAATATTTTCCAAGTCCAATAAAATAGAATTGAATTCATCCAAGTG
JMFS136A01+ TCCAAGTCCAATAAAATAGAATTGAATTCATCCAAGTG
JMFS081D09+ TTCAATTATAACATCAATATTTTCCAAGTCCAATAAAATAGAATTGAATTCATCCAAGTG
____________________________________________________________
consensus TTCAATTATAACATCAATATTTTCCAAGTCCAATAAAATAGAATTGAATTCATCCAAGTG
. : . : . : . : . : . :
JMFS082A05+ AGATTTAGTAGAAGTACCTTCCGTCATACGGATTGTGTACAGAAGCTCCTTCAGGCGTAG
JMFS136A01+ AGATTTAGTAGAAGTACCTTCCGTCATACGGATTGTGTACAGAAGCTCCTTCAGGCGTAG
JMFS081D09+ AGATTTAGTAGAAGTACCTTCCGTCATACGGATTGTGTACAGAAGCTCCTTCAGGCGTAG
____________________________________________________________
consensus AGATTTAGTAGAAGTACCTTCCGTCATACGGATTGTGTACAGAAGCTCCTTCAGGCGTAG
. : . : . : . : . : . :
JMFS082A05+ CGTATTCGCCAGAGTTTTGGCCATGTAAAGCGTATCCAGCTTGGACCATAAATCTGAAGC
JMFS136A01+ CGTATTCGCCAGAGTTTTGGCCATGTAAAGCGTATCCAGCTTGGACCATAAATCTGAAGC
JMFS081D09+ CGTATTCGCCAGAGTTTTGGCCATGTAAAGCGTATCCAGCTTGGACCATAAATCTGAAGC
____________________________________________________________
consensus CGTATTCGCCAGAGTTTTGGCCATGTAAAGCGTATCCAGCTTGGACCATAAATCTGAAGC
. : . : . : . : . : . :
JMFS082A05+ AGTCGTCTCACTTACTACCTCACGTAGAACCTCTTTAGACAGGCACAAAAGAATGGTTGA
JMFS136A01+ AGTCGTCTCACTTACTACCTCACGTAGAACCTCTTTAGACAGGCACAAAAGAATGGTTGA
JMFS081D09+ AGTCGTCTCACTTACTACCTCACGTAGAACCTCTTTAGACAGGCACAAAAGAATGGTTGA
____________________________________________________________
consensus AGTCGTCTCACTTACTACCTCACGTAGAACCTCTTTAGACAGGCACAAAAGAATGGTTGA
. : . : . : . : . : . :
JMFS082A05+ ACGTGCCTTGTCATCCAAATCTTCCCAATCTTCATCTGTCATTGCAGCCGGTTTTTTCTT
JMFS136A01+ ACGTGCCTTGTCATCCAAATCTTCCCAATCTTCATCTGTCATTGCAGCCGGTTTTTTCTT
JMFS081D09+ ACGTGCCTTGTCATCCAAATCTTCCCAATCTTCATCTGTCATTGCAGCCGGTTTTTTCTT
____________________________________________________________
consensus ACGTGCCTTGTCATCCAAATCTTCCCAATCTTCATCTGTCATTGCAGCCGGTTTTTTCTT
. : . : . : . : . : . :
JMFS082A05+ CTTCCCAGCTAGCGCTTTCTTCAAACTGTTCTGGGTTAGAACGGCTTCCATATGAACCTT
JMFS136A01+ CTTCCCAGCTAGCGCTTTCTTCAAACTGTTCTGGGTTAGAACGGCTTCCATATGAACCTT
JMFS081D09+ CTTCCCAGCTAGCGCTTTCTTCAAACTGTTCTGGGTTAGAACGGCTTCCATATGAACCTT
____________________________________________________________
consensus CTTCCCAGCTAGCGCTTTCTTCAAACTGTTCTGGGTTAGAACGGCTTCCATATGAACCTT
. : . : . : . : . : . :
JMFS082A05+ CTAGATAGAAAAGCTAATTTTCCCGTCGAACTTCTCGATATCGAACTTGGTAACTGTCGA
JMFS136A01+ CTAGATAGAAAAGCTAATTTTCCCGTCGAACTTCTCGATATCGAACTTGGTAACTGTCGA
JMFS081D09+ CTAGATAGAAAAGCTAATTTTCCCGTCGAACTTCTCGATATCGAACTTGGTAACTGTCGA
____________________________________________________________
consensus CTAGATAGAAAAGCTAATTTTCCCGTCGAACTTCTCGATATCGAACTTGGTAACTGTCGA
. : . : . : . : . : . :
JMFS082A05+ CATTTTTGAAAATAATTCTCAATTAAACCGCTCTGATACCACTTGTTAGGAATAAAAGAA
JMFS136A01+ CATTTTTGAAAATAATTCTCAATTAAACCGCTCTGATACCACTTGTTAGGAATA
JMFS081D09+ CATTTTTGAAAATAATTCTCAATTAAACCGCTCTGATACCACTTGTTAGGAATAAAAGAA
____________________________________________________________
consensus CATTTTTGAAAATAATTCTCAATTAAACCGCTCTGATACCACTTGTTAGGAATAAAAGAA
. : . : . : . : . : . :
JMFS082A05+ AAAATATATATTATCACTAGAAAGTGATTAAAGAGCATATATATATATATATATATATAT
JMFS081D09+ AAAATATATATTATCACTAGAAAGTGATTAAAGAGCATATATATATATATATATATATAT
JMFN036D06+ ATATATATATATATATATATATAT
____________________________________________________________
consensus AAAATATATATTATCACTAGAAAGTGATTAAAGAGCATATATATATATATATATATATAT
. : . : . : . : . : . :
JMFS082A05+ ATATATATATATATATATATATATATATG
JMFS081D09+ ATATATATATATATATATATATATATATG
JMFN036D06+ ATATATATATATATATATATATATATATGGGATTTTATTATGAAACTACATAGAAATAAG
rJMSF050C12- TATATATATATATATATATATGGGATTTTATTATGAAACTACATAGAAATAAG
JMSF050C12+ TATATATATATATATATATATGGGATTTTATTATGAAACTACATAGAAATAAG
____________________________________________________________
consensus ATATATATATATATATATATATATATATGGGATTTTATTATGAAACTACATAGAAATAAG
. : . : . : . : . : . :
JMFN036D06+ ATGGCAATGCAAGCACGTACTTATACTAGATACTAGATAGTTTAAAGCGAATATAATTAA
rJMSF050C12- ATGGCANTGCAAGCACGTACTTATACTAGATACTAGATAGTTTAAAGCGAATATAATTAA
JMSF050C12+ ATGGCAATGCAAGCACGTACTTATACTAGATACTAGATAGTTTAAAGCGAATATAATTAA
____________________________________________________________
consensus ATGGCAATGCAAGCACGTACTTATACTAGATACTAGATAGTTTAAAGCGAATATAATTAA
. : . : . : . : . : . :
JMFN036D06+ GATGAAAAGGACCAAAGAAAAGCTCCCATGGCGAACTTTCTTTTGTGGTTGACATCTCCC
rJMSF050C12- GATGAAAAGGACCAAAGAAAAGCTCCCATGGCGAACTTTCTTTTGTGGTTGACATCTCCC
JMSF050C12+ GATGAAAAGGACCAAAGAAAAGCTCCCATGGCGAACTTTCTTTTGTGGTTGACATCTCCC
____________________________________________________________
consensus GATGAAAAGGACCAAAGAAAAGCTCCCATGGCGAACTTTCTTTTGTGGTTGACATCTCCC
. : . : . : . : . : . :
JMFN036D06+ TGGACAGGCAGACCGTACTCGATGAGCAGGCAGTCCAGCTTCCACTCCGGCATGGTTTCG
rJMSF050C12- TGGACAGGCAGACCGTACTCGATGAGCAGGCAGTCCAGCTTCCACTCCGGCNTGGTTTCG
JMSF050C12+ TGGACAGGCAGACCGTACTCGATGAGCAGGCAGTCCAGCTTCCACTCCGGCATGGTTTCG
____________________________________________________________
consensus TGGACAGGCAGACCGTACTCGATGAGCAGGCAGTCCAGCTTCCACTCCGGCATGGTTTCG
. : . : . : . : . : . :
JMFN036D06+ TATTCCGCCCGCGTGTACCTCGGGTACCCCAAGGGCATCTGAAACCCCACGTTTCCGCAC
rJMSF050C12- TATTCCGCCCGCGTGTACCTCGGGTAGTGCAAGGGCATCTGAAACCCCACGTTTCCGCAC
JMSF050C12+ TATTCCGCCCGCGTGTACCTCGGGTAGTGCAAGGGCATCTGAAACCCCACGTTTCCGCAC
____________________________________________________________
consensus TATTCCGCCCGCGTGTACCTCGGGTAGTGCAAGGGCATCTGAAACCCCACGTTTCCGCAC
. : . : . : . : . : . :
JMFN036D06+ CGCTCCCTTCCATTTCCTCCGCTGTCAGGTGGCGTTGGCCGTGCCATGGACTCCATTCCT
rJMSF050C12- CGCTCCCTTCCATTTCCGCCGCTGTCAGGTGGCGTTGGCCGTGCCATGGACTCCATTCCT
JMSF050C12+ CGCTCCCTTCCATTTCCGCCGCTGTCAGGTGGCGTTGGCCGTGCCATGGACTCCATTCCT
____________________________________________________________
consensus CGCTCCCTTCCATTTCCGCCGCTGTCAGGTGGCGTTGGCCGTGCCATGGACTCCATTCCT
. : . : . : . : . : . :
JMFN036D06+ CCACCACTCATA
rJMSF050C12- CCACCACTCATATATTCAAGTTTGTATATGTATGTATGTATGTATGTGTAAAGCTGGCTC
JMSF050C12+ CCACCACTCATATATTCAAGTTTGTATATGTATGTATGTATGTATGTGTAAAGCTGGCTC
____________________________________________________________
consensus CCACCACTCATATATTCAAGTTTGTATATGTATGTATGTATGTATGTGTAAAGCTGGCTC