Contig 000958:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF031B15Sequence611000958 (2)ref|XP_009758034.1|3e-77PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial [Nic716005814 (2)emb|CDP07839.1|5e-102unnamed protein product [Coffea canephora]
JMSF046D01Sequence452000958 (2)ref|XP_009758034.1|1e-43PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial [Nic817005814 (2)emb|CDP07839.1|2e-124unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF031B15+ TATCAGTCGCG
                      ____________________________________________________________
consensus TATCAGTCGCG
 
. : . : . : . : . : . :
JMSF031B15+ ACGCGAAACATTCCAGGAAGTGCAATACCTGCCCCACTTCCCATCGTGACACCATNTAAG
                      ____________________________________________________________
consensus ACGCGAAACATTCCAGGAAGTGCAATACCTGCCCCACTTCCCATCGTGACACCATNTAAG
 
. : . : . : . : . : . :
JMSF031B15+ ATAGCAACANTCGGCTTCAGATATGTTCCTAAAAGGTAGACAAAATTATACAGTGTCTGG
                      ____________________________________________________________
consensus ATAGCAACANTCGGCTTCAGATATGTTCCTAAAAGGTAGACAAAATTATACAGTGTCTGG
 
. : . : . : . : . : . :
JMSF031B15+ AAGAAAATTTTGCATTCCTCAACCTTCCCTTCATTAATCAACTGANGAAGCGTAACAACA
JMSF046D01+ CTTCATTAATCAACTGATGAAGCGTAACAACA
                      ____________________________________________________________
consensus AAGAAAATTTTGCATTCCTCAACCTTCCCTTCATTAATCAACTGATGAAGCGTAACAACA
 
. : . : . : . : . : . :
JMSF031B15+ TCAGCTCCAGAACAGAAAGCTCGATCATTCCCCTTCATAACAACAAATCCAATTTCAGAG
JMSF046D01+ TCAGCTCCAGAACAGAAAGCTCGATCATTCCCCTTCATAACAACAAATCCAATTTCAGAG
                      ____________________________________________________________
consensus TCAGCTCCAGAACAGAAAGCTCGATCATTCCCCTTCATAACAACAAATCCAATTTCAGAG
 
. : . : . : . : . : . :
JMSF031B15+ TTCTCCTCCCACGAGTTATACAATCTATTCAAGCGAGCCACCATAGAGCTAGTGAGAGAA
JMSF046D01+ TTCTCCTCCCACGAGTTATACAATCTATTCAAGCGAGCCACCATAGAGCTAGTGAGAGAA
                      ____________________________________________________________
consensus TTCTCCTCCCACGAGTTATACAATCTATTCAAGCGAGCCACCATAGAGCTAGTGAGAGAA
 
. : . : . : . : . : . :
JMSF031B15+ NTGAGTGCAGAAGGTCTATTGAGTATTGCTGCTCTTGATTTCGCCCTTCCTTCAANTAAA
JMSF046D01+ TTGAGTGCAGAAGGTCTATTGAGTATTGCTGCTCTTGATTTCGCCCTTCCTTCAACTAAA
                      ____________________________________________________________
consensus TTGAGTGCAGAAGGTCTATTGAGTATTGCTGCTCTTGATTTCGCCCTTCCTTCAACTAAA
 
. : . : . : . : . : . :
JMSF031B15+ ACCTGGTCTTGAAGATAATCGTGTTGGGTGTAGCTCGGAAGAGCAGAAAAGCTTCTGTTT
JMSF046D01+ ACCTGGTCTTGAAGATAATCGTGTTGGGTGTAGCTCGGAAGAGCAGAAAAGCTTCTGTTT
                      ____________________________________________________________
consensus ACCTGGTCTTGAAGATAATCGTGTTGGGTGTAGCTCGGAAGAGCAGAAAAGCTTCTGTTT
 
. : . : . : . : . : . :
JMSF031B15+ TGGTGAGAATAGAGAAATCCANGCCTTTGCTTAGAACATCGACTCAGTAATTGTAGAGTT
JMSF046D01+ TGGTGAGAATAGAGAAATCCANGCCTTTGCTTAGAACATCGACTCAGTAATTGTAGAGTT
                      ____________________________________________________________
consensus TGGTGAGAATAGAGAAATCCANGCCTTTGCTTAGAACATCGACTCAGTAATTGTAGAGTT
 
. : . : . : . : . : . :
JMSF031B15+ TTCAATCCTATTCCTGGCATTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCCCCCTATCTC
JMSF046D01+ TTCAATCCTATTCCTGGCATTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCCCCCTATCTC
                      ____________________________________________________________
consensus TTCAATCCTATTCCTGGCATTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCCCCCTATCTC
 
. : . : . : . : . : . :
JMSF031B15+ TCTCGCGTCGCCGTGGGTGCGTTGCGGCTACTGAGCTTTTCAATGGCAGTCTAGTCTG
JMSF046D01+ TCTCGCGTCGCCGTGGGTGCGTTGCGGCTACTGAGCTTTTCAATGGCAGTCTAGTCTGCC
                      ____________________________________________________________
consensus TCTCGCGTCGCCGTGGGTGCGTTGCGGCTACTGAGCTTTTCAATGGCAGTCTAGTCTGCC