clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF046D07 | Sequence | 528 | 000953 (4) | ref|XP_011081031.1| | 2e-74 | PREDICTED: lysophospholipid acyltransferase 1-like [Sesamum indicum] ref|XP_0110 | 286 | 004132 (4) | |||
JMSF016C23 | Sequence | 217 | 000953 (4) | gb|AHE80989.1| | 1e-15 | acyl-CoA:lysophosphatidylcholine acyltransferase [Carthamus tinctorius] | 685 | 004132 (4) | ref|XP_009764156.1| | 3e-97 | PREDICTED: lysophospholipid acyltransferase 1-like [Nicotiana sylvestris] |
JMSF037A15 | Sequence | 665 | 000953 (4) | ref|XP_011081031.1| | 9e-121 | PREDICTED: lysophospholipid acyltransferase 1-like [Sesamum indicum] ref|XP_0110 | 688 | 004132 (4) | ref|XP_009764156.1| | 3e-97 | PREDICTED: lysophospholipid acyltransferase 1-like [Nicotiana sylvestris] |
JMSF045L04 | Sequence | 796 | 000953 (4) | ref|XP_011081031.1| | 8e-141 | PREDICTED: lysophospholipid acyltransferase 1-like [Sesamum indicum] ref|XP_0110 | 743 | 004132 (4) | ref|XP_009764156.1| | 1e-99 | PREDICTED: lysophospholipid acyltransferase 1-like [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMSF045L04+ GTATAATGAATCATTA
____________________________________________________________
consensus GTATAATGAATCATTA
. : . : . : . : . : . :
JMSF045L04+ AACCTTGCAAGAGGGAAATATGGTACGAGGTACAGATACAATCCCATACAAAATGCAGCC
____________________________________________________________
consensus AACCTTGCAAGAGGGAAATATGGTACGAGGTACAGATACAATCCCATACAAAATGCAGCC
. : . : . : . : . : . :
JMSF037A15+ CTGCA
JMSF045L04+ TGAAGAAGAGCCCTTAAGGTTGGCACAAAAGGTGATGGTGACGGACGTTCTTTCCCTGCA
____________________________________________________________
consensus TGAAGAAGAGCCCTTAAGGTTGGCACAAAAGGTGATGGTGACGGACGTTCTTTCCCTGCA
. : . : . : . : . : . :
JMSF037A15+ GGCTTCCAGATTCCTTTCCTCTCTGTCCATTCAAGGTAAGCCTTCATTTCGTACACTGGA
JMSF045L04+ GGCTTCCAGATTCCTTTCCTCTCTGTCCATTCAAGGTAAGCCTTCATTTCGTACACTGGA
____________________________________________________________
consensus GGCTTCCAGATTCCTTTCCTCTCTGTCCATTCAAGGTAAGCCTTCATTTCGTACACTGGA
. : . : . : . : . : . :
JMSF037A15+ CCAGCAAAATGACTTCCACAACAAAGACAGTAACCAATGTACTCAAATAATGATGGCAAT
JMSF045L04+ CCAGCAAAATGACTTCCACAACAAAGACAGTAACCAATGTACTCAAATAATGATGGCAAT
____________________________________________________________
consensus CCAGCAAAATGACTTCCACAACAAAGACAGTAACCAATGTACTCAAATAATGATGGCAAT
. : . : . : . : . : . :
JMSF037A15+ TTGAGCAAACGGTTTTGTTTCTGTGCCTCACGTAAATCATTCTCCTTCAGCAATCCATCT
JMFF046D07+ GAGCAAACGGTTTTGTTTCTGTGCCTCACGTAAATCATTCTCCTTCAGCAATCCATCT
JMSF045L04+ TTGAGCAAACGGTTTTGTTTCTGTGCCTCACGTAAATCATTCTCCTTCAGCAATCCATCT
____________________________________________________________
consensus TTGAGCAAACGGTTTTGTTTCTGTGCCTCACGTAAATCATTCTCCTTCAGCAATCCATCT
. : . : . : . : . : . :
JMSF037A15+ TGGTAATTCATCACACATGAAATGATTTTCAGTGTGATCACCATTAAAGCTCCTGTAGAA
JMFF046D07+ T-GTAATTCATCACACATGAAATGATTTTCAGTGTGATCACCATTAAAGCTCCTGTAGAA
JMSF045L04+ TGGTAATTCATCACACATGAAATGATTTTCAGTGTGATCACCATTAAAGCTCCTGTAGAA
____________________________________________________________
consensus TGGTAATTCATCACACATGAAATGATTTTCAGTGTGATCACCATTAAAGCTCCTGTAGAA
. : . : . : . : . : . :
JMSF037A15+ TCAATTCCTCCTTCCTTCCATGCATCGCCACTCATGTAGTATACATGGCATCCAATGAGG
JMFF046D07+ TCAATTGCTCCTTCCTTCCATGCATCGCCACTCATGTAGTATACATGGCATCCAATGAGG
JMSF045L04+ TCAATTCCTCCTTCCTTCCATGCATCGCCACTCATGTAGTATACATGGCATCCAATGAGG
____________________________________________________________
consensus TCAATTCCTCCTTCCTTCCATGCATCGCCACTCATGTAGTATACATGGCATCCAATGAGG
. : . : . : . : . : . :
JMSF037A15+ TAGCCAAAGGCGAGGAAGAAAGTGATTATCCCACAGTAAGGGCGGTAAAGAAGCATTGAA
JMFF046D07+ TAGCCAAAGGCGAGGAAGAAAGTGATTATCCCACAGTAAGGGCGGTAAAGAAGCATTGAA
JMSF045L04+ TAGCCAAAGGCGAGGAAGAAAGTGATTATCCCACAGTAAGGGCGGTAAAGAAGCATTGAA
____________________________________________________________
consensus TAGCCAAAGGCGAGGAAGAAAGTGATTATCCCACAGTAAGGGCGGTAAAGAAGCATTGAA
. : . : . : . : . : . :
JMSF037A15+ GCGTAGCCCAATAGCATGGGCACCAAGAAGTGGAGGTTGGAGGAGAAACCAAAGGACAAG
JMFF046D07+ GCGTAGCCCAATAGCATGGGCACCAAGAAGTGGAGGTTGGAGGAGAAACCAAAGGACAAG
JMSF045L04+ GCGTAGCCCAATAGCATGGGCACCAAGAAGTGGAGGTTGGAGGAGAAACCAAAGGACAAG
____________________________________________________________
consensus GCGTAGCCCAATAGCATGGGCACCAAGAAGTGGAGGTTGGAGGAGAAACCAAAGGACAAG
. : . : . : . : . : . :
JMSF037A15+ TAGGAGAGAAGGGCGCCGGTGAGGGCGGCGTAGAGGTGCCTCCCGGACGAACCACCGGGG
JMFF046D07+ TAGGAGAGAAGGGCGCCGGTGAGGGCGGCGTAGAGGTGCCTCCCGGACGAACCACCGGGG
JMSF016C23+ GGGCGGCGTAGAGGTGCNTCCCGGACGAACCACCGGGG
JMSF045L04+ TAGGAGAGAAGGGCGCCGGTGAGGGCGGCGTAGAGGTGCCTCCCGGACGAACCACCGGGG
____________________________________________________________
consensus TAGGAGAGAAGGGCGCCGGTGAGGGCGGCGTAGAGGTGCCTCCCGGACGAACCACCGGGG
. : . : . : . : . : . :
JMSF037A15+ ACAAAACGGTGGAGGCAGCTCACCGGAATTGTGGCTACGAAGCACAAAAGGAAGCGCAGT
JMFF046D07+ ACAAAACGGTGGAGGCAGCTCACCGGAATTGTGGCTACGAAGCACAAAAGGAAGCGCAGT
JMSF016C23+ ACAAAACGGTGGAGGCAGCTCACCGGAATTGTGGCTACGAAGCACAAAAGGAAGCGCAGT
JMSF045L04+ ACAAAACGGTGGAGGCAGCTCACCGGAATTGTGGCTACGAAGCACAAAAGGAAGCGCAGT
____________________________________________________________
consensus ACAAAACGGTGGAGGCAGCTCACCGGAATTGTGGCTACGAAGCACAAAAGGAAGCGCAGT
. : . : . : . : . : . :
JMSF037A15+ ACCGGCACCGATACTCCGATTGCTGACGCCATTGGTTCCAGCTCCATGTCTCTCTCTTGT
JMFF046D07+ ACCGGCACCGATACTCCGATTGCTGACGCCATTGGTTCCAGCTCCATGTCTCTCTCTTGT
JMSF016C23+ ACCGGCACCGATACTCCGATTGCTGACGCCATTGGTTCCAGCTCCATGTCTCTCTCTTGT
JMSF045L04+ ACCGGCACCGATACTCCGATTGCTGACGCCATTGGTTCCAGCTCCATGTCTCTCTCTTGT
____________________________________________________________
consensus ACCGGCACCGATACTCCGATTGCTGACGCCATTGGTTCCAGCTCCATGTCTCTCTCTTGT
. : . : . : . : . : . :
JMSF037A15+ TGTTAGCTCAACCACTCTCCCTCAAGTCTTCGATTCCGAAGCTAAAGCAGCTAGCTATC
JMFF046D07+ TGTTAGCTCAACCACTCTCCCTCAAGTCTTCGATTCCGAAGCTAAAGCAGC
JMSF016C23+ TGTTAGCTCAACCACTCTCCCTCAAGTCTTCGATTCCGAAGCTAAAGCAGCTAGCTATC
JMSF045L04+ TGTTAGCTCAACCACTCTCCCTCAAGTCTTCGATTCCGAAGCTAAAGCAGCTAGCTATCC
____________________________________________________________
consensus TGTTAGCTCAACCACTCTCCCTCAAGTCTTCGATTCCGAAGCTAAAGCAGCTAGCTATCC