clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMCP001C12 | Sequence | 495 | 000952 (5) | gb|KJB30564.1| | 1e-63 | hypothetical protein B456_005G149100 [Gossypium raimondii] | |||||
JMCP006E12 | Sequence | 584 | 000952 (5) | gb|AEO52817.1| | 8e-86 | putative S-adenosylmethionine decarboxylase proenzyme, partial [Solanum ochrant | |||||
JMCP020A02 | Sequence | 226 | 000952 (5) | gb|AER27717.1| | 3e-28 | S-adenosylmethionine decarboxylase [Nicotiana tabacum] | |||||
JMSF025M04 | Sequence | 644 | 000952 (5) | gb|KDO58886.1| | 2e-15 | hypothetical protein CISIN_1g043845mg, partial [Citrus sinensis] | 173 | 005326 (2) | |||
JMSF045G09 | Sequence | 797 | 000952 (5) | dbj|BAF91878.1| | 5e-139 | S-adenosylmethionine decarboxylase [Nicotiana benthamiana] |
This contig is upended
. : . : . : . : . : . :
JMSF025M04- GG
____________________________________________________________
consensus GG
. : . : . : . : . : . :
JMSF025M04- TATTTTCTCGAAACTCCAAAGTTGAAAAACCCGCTGCCTTCTCTCCTTTGTCTTTCCGCG
____________________________________________________________
consensus TATTTTCTCGAAACTCCAAAGTTGAAAAACCCGCTGCCTTCTCTCCTTTGTCTTTCCGCG
. : . : . : . : . : . :
JMSF025M04- ATTCCAAAAGCCGCGACCCTGATTATCTAGATTGATTGGGGTGCACCTGTAATTGCCTTG
____________________________________________________________
consensus ATTCCAAAAGCCGCGACCCTGATTATCTAGATTGATTGGGGTGCACCTGTAATTGCCTTG
. : . : . : . : . : . :
JMSF025M04- GGGAGTGATTATTTTCCATAAACATTCAAATTTTAATTCTGTAGACTGAATGATCTAATG
____________________________________________________________
consensus GGGAGTGATTATTTTCCATAAACATTCAAATTTTAATTCTGTAGACTGAATGATCTAATG
. : . : . : . : . : . :
JMSF025M04- GAATCCAAAGGTGGGAAGAAGATATCTAGTAGTAGTAGTAGTAGTAAATCGTTGTTCTAC
____________________________________________________________
consensus GAATCCAAAGGTGGGAAGAAGATATCTAGTAGTAGTAGTAGTAGTAAATCGTTGTTCTAC
. : . : . : . : . : . :
JMSF025M04- GAAGCTCCCCTCGGTTACAGCATTGAAGACGTTCGACCACACGGAGGAATCAAGAAATTC
____________________________________________________________
consensus GAAGCTCCCCTCGGTTACAGCATTGAAGACGTTCGACCACACGGAGGAATCAAGAAATTC
. : . : . : . : . : . :
JMSF025M04- AGATGTGCTGCCTACTCCAACTGCGCTCGCAAACCATCCTGATATTTCTAGACTGGTGTT
____________________________________________________________
consensus AGATGTGCTGCCTACTCCAACTGCGCTCGCAAACCATCCTGATATTTCTAGACTGGTGTT
. : . : . : . : . : . :
JMSF025M04- GTGATCACGTCTCTTGACGTGGTGCTACTAAAGCCATTCTCTTTTTCGATTTTTCCCTTT
____________________________________________________________
consensus GTGATCACGTCTCTTGACGTGGTGCTACTAAAGCCATTCTCTTTTTCGATTTTTCCCTTT
. : . : . : . : . : . :
JMSF025M04- TATTTTTTATTTTCCAACCCGCATTCCTTTTCTTCTTTCTCGTGCTACTTTCTTGTTTTC
____________________________________________________________
consensus TATTTTTTATTTTCCAACCCGCATTCCTTTTCTTCTTTCTCGTGCTACTTTCTTGTTTTC
. : . : . : . : . : . :
JMSF025M04- TGTTTTTTTGGGTGTCTTTCTACTTGGTCTTCGGTGAAACTGTGTCTTGTTGCAAACAAC
rJMCP006E12+ GGGTGTCTTTCTACTTGGTCTTCGGTGAAACTGTGTCTTGTTGCAAACAAC
____________________________________________________________
consensus TGTTTTTTTGGGTGTCTTTCTACTTGGTCTTCGGTGAAACTGTGTCTTGTTGCAAACAAC
. : . : . : . : . : . :
JMSF025M04- TGCATTTTAGAAATGGCCTTGCCAGTCTCTGCTATTGGATTTGAAGGTTACGAGAAGAGG
rJMCP006E12+ TGCATTTTAGAAATGGCCTTGCCAGTCTCTGCTATTGGATTTGAAGGTTACGAGAAGAGG
rJMCP001C12+ GTTACGAGAAGAGG
JMSF045G09- GTTACGAGAAGAGG
____________________________________________________________
consensus TGCATTTTAGAAATGGCCTTGCCAGTCTCTGCTATTGGATTTGAAGGTTACGAGAAGAGG
. : . : . : . : . : . :
JMSF025M04- CTTGAAATTTCATTTTGTAAGCATGGCGTCTTTGCTGATGAT
rJMCP006E12+ CTTGAAATTTCATTTTGTAAGCATGGCGTCTTTGCTGATGATCCGAATTGGAAGGGCCTT
rJMCP001C12+ CaacAAATaaCAaaaacatAGCtTGGgGTCTaacCactTGtaggGttaacctAcccggaa
JMSF045G09- CTTGAAATTTCATTTTGTAAGCATGGCGTCTTTGCTGATGATCCGAATTGGAAGGGCCTT
____________________________________________________________
consensus CTTGAAATTTCATTTTGTAAGCATGGCGTCTTTGCTGATGATCCGAATTGGAAGGGCCTT
. : . : . : . : . : . :
rJMCP006E12+ CGAGCTCTTTCCAAAGCACAGTTGGATGAATTCCTGGAACCTGCTGAGTGCACAATAGTT
rJMCP001C12+ CGAGCTCTTTCCAAAGCACtcaacctTGAATTggaGcttggacgaGAGTGCACAATAGTT
JMSF045G09- CGAGCTCTTTCCAAAGCACAGTTGGATGAATTCCTGGAACCTGCTGAGTGCACAATAGTT
____________________________________________________________
consensus CGAGCTCTTTCCAAAGCACAGTTGGATGAATTCCTGGAACCTGCTGAGTGCACAATAGTT
. : . : . : . : . : . :
rJMCP006E12+ TCTGCACTGTCAAATAAGTATGTGGACTCCTATGTCCTCTCTGAATCAAGCCTCTTCGTT
rJMCP001C12+ TCTGCACTGTCAAATAAGTATGTGGACTCCTATGTCCTCTCTGAATCAAGCCTCTTCGTT
JMSF045G09- TCTGCACTGTCAAATAAGTATGTGGACTCCTATGTCCTCTCTGAATCAAGCCTCTTCGTT
____________________________________________________________
consensus TCTGCACTGTCAAATAAGTATGTGGACTCCTATGTCCTCTCTGAATCAAGCCTCTTCGTT
. : . : . : . : . : . :
rJMCP006E12+ TATGCTCACAAGATAATTATCAAAACCTGTGGGACAACCAAATTGCTTCGAGCAATCCCG
rJMCP001C12+ TATGCTCACAAGATAATTATCAAttggacTGGGAgAACCAAATTGCTTCGAGCAATCCCG
JMSF045G09- TATGCTCACAAGATAATTATCAAAACCTGTGGGACAACCAAATTGCTTCGAGCAATCCCG
____________________________________________________________
consensus TATGCTCACAAGATAATTATCAAAACCTGTGGGACAACCAAATTGCTTCGAGCAATCCCG
. : . : . : . : . : . :
rJMCP006E12+ AACATCCTGAAGTTGGCGGGTTCCCTTTCTCTGAAAGTACAAACTGTTAGATACACCCGT
rJMCP001C12+ AACATCCTGAAGaacGCGGGTTCCCTTTCTCTGAAAGTACAAACTGTTAGATACACCCGT
rJMCP020A02+ TGAAcaaccgGGGTTCCCTTTCTCTGAAAGTACAAACTGTTAGATACACCCGT
JMSF045G09- AACATCCTGAAGTTGGCGGGTTCCCTTTCTCTGAAAGTACAAACTGTTAGATACACCCGT
____________________________________________________________
consensus AACATCCTGAAGTTGGCGGGTTCCCTTTCTCTGAAAGTACAAACTGTTAGATACACCCGT
. : . : . : . : . : . :
rJMCP006E12+ GGGTGCTTCATTTTCCCAGGGGCTCAGCCATCTCCTCACCGTTGCTTCTCAGAAGAAGTT
rJMCP001C12+ GGGCGCTTCATTTTCCCAGGGGCTCAGCCATCTCCTCACCGTTGCTTCTCAGAAGAAGTT
rJMCP020A02+ GGGTGCaTCAaaaaggCAGGGGgaCAGCCATCTCCTCACCGTTGCTTCTCAGAAGAAGTT
JMSF045G09- GGGTGCTTCATTTTCCCAGGGGCTCAGCCATCTCCTCACCGTTGCTTCTCAGAAGAAGTT
____________________________________________________________
consensus GGGTGCTTCATTTTCCCAGGGGCTCAGCCATCTCCTCACCGTTGCTTCTCAGAAGAAGTT
. : . : . : . : . : . :
rJMCP006E12+ GCTGCACTGG-ATGGCTATTTCGGAAAGCTTAGATCGGGAAGCAAGGCTTATATTTTGGG
rJMCP001C12+ GCacgtgaccttcccaataaagcctttcgaatGATCGGGAAGCAAGGCTTATATTTTGGG
rJMCP020A02+ GCTGCACTGG-ATGGCTATTTCGGAAAGCTTAGATCGGGAAGCAAGGCTTATATTTTGGG
JMSF045G09- GCTGCACTGG-ATGGCTATTTCGGAAAGCTTAGATCGGGAAGCAAGGCTTATATTTTGGG
____________________________________________________________
consensus GCTGCACTGG-ATGGCTATTTCGGAAAGCTTAGATCGGGAAGCAAGGCTTATATTTTGGG
. : . : . : . : . : . :
rJMCP006E12+ CAGTCCTGCCATGTCACAGAAATGGCACGTTTACTTTGCTTCGGATGAAACTAT
rJMCP001C12+ CAGTCCTGCCATATCACAGAAATGGCACGTTTACTTTGCTTCGGATGAAACTAT
rJMCP020A02+ CAGTCCTGCCATATCACAGAAATGGCACGTTTACTTTGCTTCGGATGAAACTAT
JMSF045G09- CAGTCCTGCCATATCACAGAAATGGCACGTTTACTTTGCTTCGGATGAAACTATCCCGGC
____________________________________________________________
consensus CAGTCCTGCCATATCACAGAAATGGCACGTTTACTTTGCTTCGGATGAAACTATCCCGGC
. : . : . : . : . : . :
JMSF045G09- CAAGAACCCTGTTTACACTCTGGAAATGTGCATGACTGGTTTGGATAAGGAGAAGGCTTC
____________________________________________________________
consensus CAAGAACCCTGTTTACACTCTGGAAATGTGCATGACTGGTTTGGATAAGGAGAAGGCTTC
. : . : . : . : . : . :
JMSF045G09- TGTCTTTTACAAGCATGGATCTAGCTCTGCAGCCCTCATGACCGTTAAATCCGGCATTAG
____________________________________________________________
consensus TGTCTTTTACAAGCATGGATCTAGCTCTGCAGCCCTCATGACCGTTAAATCCGGCATTAG
. : . : . : . : . : . :
JMSF045G09- GAAGATCCTCCCTCGCTCTGACATATGCGATTTTGAGTTTGACCCTTGCGGGTATTCCAT
____________________________________________________________
consensus GAAGATCCTCCCTCGCTCTGACATATGCGATTTTGAGTTTGACCCTTGCGGGTATTCCAT
. : . : . : . : . : . :
JMSF045G09- GAATTCTATTGAAGGACCCGCGCATTCTACCATCCACGTTACTCCTGAAGATGGATTTAG
____________________________________________________________
consensus GAATTCTATTGAAGGACCCGCGCATTCTACCATCCACGTTACTCCTGAAGATGGATTTAG
. : . : . : . : . : . :
JMSF045G09- TTATGCTAGCTTTGAAGCTGTTGGATATGACCTGAAAACTGCGAACCTGGCGCTCTTGAT
____________________________________________________________
consensus TTATGCTAGCTTTGAAGCTGTTGGATATGACCTGAAAACTGCGAACCTGGCGCTCTTGAT