Contig 000942:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF042D06Sequence636000942 (6)gb|ABU46395.1|6e-15chloroplast adenylate kinase [Ipomoea batatas]
JMSF008P19Sequence262000942 (6)723024481
JMSF036B15Sequence560000942 (6)gb|ABU41826.1|2e-12adenylate kinase [Ipomoea batatas]706000942 (6)gb|ABU46395.1|9e-15chloroplast adenylate kinase [Ipomoea batatas]
JMSF044C07Sequence911000942 (6)gb|ABU46395.1|4e-12chloroplast adenylate kinase [Ipomoea batatas]672022635
JMSF053E23Sequence387000942 (6)315021624

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF036B15- CTTGGACGATAATAATATTGGAACATCTGAATGC
                      ____________________________________________________________
consensus CTTGGACGATAATAATATTGGAACATCTGAATGC
 
. : . : . : . : . : . :
JMSF008P19+ ATGCCAGAATCTCAGCTCCAATTCATTATCGGCA
rJMSF036B15- ATACGCTTTCAGGAAAAGAGAAAGATATGCCAGAATCTCAGCTCCAATTCATTATCGGCA
                      ____________________________________________________________
consensus ATACGCTTTCAGGAAAAGAGAAAGATATGCCAGAATCTCAGCTCCAATTCATTATCGGCA
 
. : . : . : . : . : . :
JMSF008P19+ ACGTACAGCGCTGAAAACGCCATGGACAATGCGCATCAGAGACTCTAATTTATTGCCTT
rJMSF036B15- ACGTACAGCGCTGAAAACGCCATGGACAATGCGCATCAGAGACTCTAATTTATTGCCTTC
                      ____________________________________________________________
consensus ACGTACAGCGCTGAAAACGCCATGGACAATGCGCATCAGAGACTCTAATTTATTGCCTTC
 
. : . : . : . : . : . :
rJMSF036B15- AAGGAACCGAATGACAAAAAAATAGAACTCAAAATACTTGGGCAAATTTATGCGTGTCGG
                      ____________________________________________________________
consensus AAGGAACCGAATGACAAAAAAATAGAACTCAAAATACTTGGGCAAATTTATGCGTGTCGG
 
. : . : . : . : . : . :
rJMSF036B15- AACGTCTGAATGCATACACTTTCTGGAAAACAGAAAGATACGCTAGAATCTCAGCTCCGA
                      ____________________________________________________________
consensus AACGTCTGAATGCATACACTTTCTGGAAAACAGAAAGATACGCTAGAATCTCAGCTCCGA
 
. : . : . : . : . : . :
rJMSF036B15- TTCATTATCGGCAACGTACAGCGGCTTAACGGTAAAAGAAAGGAATGCCAGAATCTCAGC
JMSF044C07+ GCTTAACGGTAAAAGAAAGGAATGCCAGAATCTCAGC
                      ____________________________________________________________
consensus TTCATTATCGGCAACGTACAGCGGCTTAACGGTAAAAGAAAGGAATGCCAGAATCTCAGC
 
. : . : . : . : . : . :
rJMSF036B15- TCCATTTCATTATCGGCAACGTACAGCGCTGAAAACGCCATGGACAAAGCGCATCAGAGA
JMFF042D06+ GCAACGTACAGCGCTGAAAACGCCATGGACAAAGCGCATCAGAGA
JMSF044C07+ TCCATTTCATTATCGGCAACGTACAGCGCTGAAAACGCCATGGACAAAGCGCATCAGAGA
                      ____________________________________________________________
consensus TCCATTTCATTATCGGCAACGTACAGCGCTGAAAACGCCATGGACAAAGCGCATCAGAGA
 
. : . : . : . : . : . :
rJMSF036B15- CTCTAATTTATTGCCTTACCAACAGCAAAACTTCATCCCACATCAACCCCTAAAAACAAT
JMFF042D06+ CTCTAATTTATTGCCTTACCAACAGCAAAACTTCATCCCACATCAACCCCTAAAAACAAT
JMSF036B15+ CATCAACCCCTAAAAACAAT
JMSF044C07+ CTTTAATTTATTGCCTTACCAACAGCAAAACTTCATCCCACATCNACCCCTAAAAACAAT
                      ____________________________________________________________
consensus CTCTAATTTATTGCCTTACCAACAGCAAAACTTCATCCCACATCAACCCCTAAAAACAAT
 
. : . : . : . : . : . :
rJMSF036B15- AGCTAACGAAAACGCTAGAATGGGAGTAAATTGCAGATCGCCGGTGGCGATGTGCAGGCC
JMFF042D06+ AGCTAACGAAAACGCTAGAATGGGAGTAAATTGCAGATCGCCGGTGGCGATGTGCAGGCC
JMSF036B15+ AGCTAACGAAAACGCTAGAATGGGAGTAAATTGCAGATCGCCGGTGGCGATGTGCNGGCC
JMSF044C07+ AGCTAACGAAAACGCTAGAATGGGAGTAAATTGCAGATCNCCGGTGGCGATGTGCAGGCC
                      ____________________________________________________________
consensus AGCTAACGAAAACGCTAGAATGGGAGTAAATTGCAGATCGCCGGTGGCGATGTGCAGGCC
 
. : . : . : . : . : . :
rJMSF036B15- TCCGAAGAGTGTAGAAAGTCGGCAAGCGTAAATCCCCTTTCGGACGCCGGGGAATCCTAA
JMFF042D06+ TCCGAAGAGTGTAGAAAGTCGGCAAGCGTAAATCCCCTTTCGGACGCCGGGGAATCCTAA
JMSF036B15+ TCCGAAGAGTGTAGAAAGTCGGCAAGCGTAAATCCCCTTTCGGACGCCGGGGAATCCTAA
JMSF044C07+ TCCGAAGAGTGTAGAAAGTCGGCAAGCGTAAATCCCCTTTCGGACGCCGGGGAATCCTAA
                      ____________________________________________________________
consensus TCCGAAGAGTGTAGAAAGTCGGCAAGCGTAAATCCCCTTTCGGACGCCGGGGAATCCTAA
 
. : . : . : . : . : . :
rJMSF036B15- GAACACCAATTGGGCGCTCTTAGCCTTTAGATCTTGACCCGTCGAGAGAGGATTATTGAT
JMFF042D06+ GAACACCAATTGGGCGCTCTTAGCCTTTAGATCTTGACCCGTCGAGAGAGGATTATTGAT
JMSF036B15+ GAACNCCAATTGGGCGCTNTTAGCCTTTAGATCTTGACCCGTCGAGAGAGGATTATTGAT
JMSF053E23+ TTGACCCGTCGAGAGAGGATTATTGAT
JMSF044C07+ GAACNCCAATTGGGCGCTNTTAGCCTTTAGATCTTGACCCGTCGAGAGAGGATTATTGAT
                      ____________________________________________________________
consensus GAACACCAATTGGGCGCTCTTAGCCTTTAGATCTTGACCCGTCGAGAGAGGATTATTGAT
 
. : . : . : . : . : . :
rJMSF036B15- GCACGGATGCGATTTCACTGTCTCCNATGCAGCGGCAGCGGATAAAGAGCTCCAA
JMFF042D06+ GCACGGATGCGATTTCACTGTCTCCAATGCAGCGGCAGCGGATAAAGAGCTCCAAAGCGA
JMSF036B15+ GCNCGGATGCGATTTCNCTGTNTCCAATGCAGCGGCAGCGGATAAAGAGCTCCAAAGCGA
JMSF053E23+ GCACGGATGCGATTTCACTGTNTCCAATGCAGCGGCAGCGGATAAAGAGCTCCAAAGNGN
JMSF044C07+ GCNCGGATGCGATTTCNCTGTCTCCAATGCAGCGGCAGCGGATAAAGAGCTCCAAAGCGA
                      ____________________________________________________________
consensus GCACGGATGCGATTTCACTGTCTCCAATGCAGCGGCAGCGGATAAAGAGCTCCAAAGCGA
 
. : . : . : . : . : . :
JMFF042D06+ TGAGAATGAGGATAAGTAGGGAAGAAATTTTTGAACATCAAAATCTACAGGAGACTATTT
JMSF036B15+ TGAGAATGAGGATAAGTAGGGAAGAAATTTTTGAACNTCAAAATNTACNGGNGACTATTT
JMSF053E23+ TGNGAATGAGGNTAAGTAGGGAAGAAATTTTTGAACNTCAAAATNTACNGGNGACTATTT
JMSF044C07+ TGAGAATGAGGATAAGTAGGGAAGAAATTTTTGAACATCAAAATTTACNGGAGNCTATTT
                      ____________________________________________________________
consensus TGAGAATGAGGATAAGTAGGGAAGAAATTTTTGAACATCAAAATTTACAGGAGACTATTT
 
. : . : . : . : . : . :
JMFF042D06+ CCAGAAAATTAACAGAAAAAAAAAATCAAAAGAAATATGTTAAGAAACAAAACATATATG
JMSF036B15+ CCNGAAAATTAACNGAAAAAAAAAATCAAAAGAAATATGTTAAGAAACAAAACATATATG
JMSF053E23+ CCNGAAAATTANCNGAAAAAAAAAATCAAAAGAAATATGTTAAGAAACAAAACATATATG
JMSF044C07+ CCAGAAAATTAACAGAAAAAAAAAATCAAAAGAAATATGTTAAGAAACAAAACATATATG
                      ____________________________________________________________
consensus CCAGAAAATTAACAGAAAAAAAAAATCAAAAGAAATATGTTAAGAAACAAAACATATATG
 
. : . : . : . : . : . :
JMFF042D06+ GCTCAGCGAGTAAGAATTGAATCAATAAGCTATAATCAATAGCTTTCGTAGTTTGATGGT
JMSF036B15+ GCTCAGCGAGTAAGAATTGAATCAATAAGCTATAATCAATAGATTTCGTAGTTTGATGGT
JMSF053E23+ GCTCAGCGAGTAAGAATTGAATCAATAAGCTATAATCAATAGCTTTCGTAGTTTGATGGT
JMSF044C07+ GCTCAGCGAGTAAGAATTGAATCAATAAGCTATAATCAATAGCTTTCGTAGTTTGATGGT
                      ____________________________________________________________
consensus GCTCAGCGAGTAAGAATTGAATCAATAAGCTATAATCAATAGCTTTCGTAGTTTGATGGT
 
. : . : . : . : . : . :
JMFF042D06+ ATTATACTTCAGACATCACAGCCACAAAAACTCATCGGAAGCGAAGAAGAAAGATGCTAA
JMSF036B15+ ATTATACTTCAGACATCACAGCCACAAAAACTCATCGGAAGCGAAGAAGAAAGATGCTAA
JMSF053E23+ ATTATACTTCAGACATCACAGCCACAAAAACTCATCGGAAGCGAAGAAGAAAGATGCTAA
JMSF044C07+ ATTATACTTCAGACATCACAGCCACAAAAACTCATCGGAAGCGAAGAAGAAAGATGCTAA
                      ____________________________________________________________
consensus ATTATACTTCAGACATCACAGCCACAAAAACTCATCGGAAGCGAAGAAGAAAGATGCTAA
 
. : . : . : . : . : . :
JMFF042D06+ CACTACAAACAAAAGCTAGAAAGAGTGAGGCGAAGAGAATAGCGGAACCCT
JMSF036B15+ CACTACAAACAAAAGCTAGAAAGAGTGAGGCGAAGAGAATAGCGGAACCCTAATTTGA
JMSF053E23+ CACTACAAACAAAAGCTAGAAAGAGTGAGGCGAAGAGAATAGCGGAACCCTAATTTGA
JMSF044C07+ CACTACAAACAAAAGCTAGAAAGAGTGAGGCGAAGAGAATAGCGGAACCCTAATTTGACC
                      ____________________________________________________________
consensus CACTACAAACAAAAGCTAGAAAGAGTGAGGCGAAGAGAATAGCGGAACCCTAATTTGACC