Contig 000924:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF035G07Sequence676000924 (3)ref|XP_006338664.1|7e-119PREDICTED: glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform-like isofor771004322 (3)ref|XP_010554089.1|5e-134PREDICTED: glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform 2-like [Tar
JMSF036L23Sequence705000924 (3)ref|XP_006338664.1|3e-98PREDICTED: glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform-like isofor698004322 (3)ref|XP_010554089.1|8e-119PREDICTED: glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform 2-like [Tar
JMSF042L05Sequence706000924 (3)ref|XP_006338664.1|2e-127PREDICTED: glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform-like isofor827004322 (3)ref|XP_010554089.1|3e-146PREDICTED: glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform 2-like [Tar

Alignment

This contig is upended


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JMSF035G07+                                                       GTTCATCAAATAATTC
JMSF036L23+                         CCAAGTAATGGTCAATACGATAAATTTGTGGTTCATCAAATAATTC
JMSF042L05+                         CCAAGTAATGGTCAATACGATAAATTTGTGGTTCATCAAATAATTC
                      ____________________________________________________________
consensus                           CCAAGTAATGGTCAATACGATAAATTTGTGGTTCATCAAATAATTC
 
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JMSF035G07+           TCCTATTTGGGCACTAAGTTCCTCAGATGAAGCCAAATCCTTGCCAAAGGGCTTCTCAAC
JMSF036L23+           TCCTATTTGGGCACTAAGTTCCTCAGATGAAGCCAAATCCTTGCCAAAGGGCTTCTCAAC
JMSF042L05+           TCCTATTTGGGCACTAAGTTCCTCAGATGAAGCCAAATCCTTGCCAAAGGGCTTCTCAAC
                      ____________________________________________________________
consensus             TCCTATTTGGGCACTAAGTTCCTCAGATGAAGCCAAATCCTTGCCAAAGGGCTTCTCAAC
 
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JMSF035G07+           AACAATGCGTGTCCATCCACCCAAATCAGATTTATTCATGCAATAAGATTTTATCATTCT
JMSF036L23+           AACAATGCGTGTCCATCCACCCAAATCAGATTTATTCATGCAATAAGATTTTATCATTCT
JMSF042L05+           AACAATGCGTGTCCATCCACCCAAATCAGATTTATTCATGCAATAAGATTTTATCATTCT
                      ____________________________________________________________
consensus             AACAATGCGTGTCCATCCACCCAAATCAGATTTATTCATGCAATAAGATTTTATCATTCT
 
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JMSF035G07+           GCAAACAGGTGGGTATACTGAAGGAGGAAGTGCAAGGTAGAAGAGTCTTCTAGCAGATCC
JMSF036L23+           GCAAACAGGTGGGTATACTGAAGGAGGAAGTGCAAGGTAGAAGAGTCTTCTAGCAGATCC
JMSF042L05+           GCAAACAGGTGGGTATACTGAAGGAGGAAGTGCAAGGTAGAAGAGTCTTCTAGCAGATCC
                      ____________________________________________________________
consensus             GCAAACAGGTGGGTATACTGAAGGAGGAAGTGCAAGGTAGAAGAGTCTTCTAGCAGATCC
 
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JMSF035G07+           CTCTGTGCTGTTTCTTGATATTTCGTGCTCATAAATTGCCTTATCTAATGTCTGGAAACC
JMSF036L23+           CTCTGTGCTGTTTCTTGATATTTCGTGCTCATAAATTGCCTTATCTAATGTCTGGAAACC
JMSF042L05+           CTCTGTGCTGTTTCTTGATATTTCGTGCTCATAAATTGCCTTATCTAATGTCTGGAAACC
                      ____________________________________________________________
consensus             CTCTGTGCTGTTTCTTGATATTTCGTGCTCATAAATTGCCTTATCTAATGTCTGGAAACC
 
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JMSF035G07+           CTCCTCAGAGTCATAACCACCACTTATATATTCAATCAATTGCAGAAAATCCGAAACTTC
JMSF036L23+           CTCCTCAGAGTCATAACCACCACTTATATA-TCAATCAATTGCAGAAAATCCGAAACTTC
JMSF042L05+           CTCCTCAGAGTCATAACCACCACTTATATATTCAATCAATTGCAGAAAATCCGAAACTTC
                      ____________________________________________________________
consensus             CTCCTCAGAGTCATAACCACCACTTATATATTCAATCAATTGCAGAAAATCCGAAACTTC
 
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JMSF035G07+           TTCAGCATTCTCTTTCCCTTGAGAAAGATACCCATGGATCCTTTCTTTCAAGTCATTATT
JMSF036L23+           TTCAGCATTCTCTTTCCCTTGAGAAAGATACCCATGGATCCTTTCTTTCAAGTCATTATT
JMSF042L05+           TTCAGCATTCTCTTTCCCTTGAGAAAGATACCCATGGATCCTTTCTTTCAAGTCATTATT
                      ____________________________________________________________
consensus             TTCAGCATTCTCTTTCCCTTGAGAAAGATACCCATGGATCCTTTCTTTCAAGTCATTATT
 
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JMSF035G07+           TGAAATTTTGGACCTTGCATACCCAAAAATGTGAACTTCATTAGATTGCAAGAACCCCTG
JMSF036L23+           TGAAATTTTGGACCTTGCATACCCAAAAATGTGAACTTCATTAGATTGCAAGAACCCCTG
JMSF042L05+           TGAAATTTTGGACCTTGCATACCCAAAAATGTGAACTTCATTAGATTGCAAGAACCCCTG
                      ____________________________________________________________
consensus             TGAAATTTTGGACCTTGCATACCCAAAAATGTGAACTTCATTAGATTGCAAGAACCCCTG
 
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JMSF035G07+           GCGATAGAGGTTGAAAAGTGCTGGGAAAGTCTTCTTCTTAGCAAGATCACCAGAAGCACC
JMSF036L23+           GCGATAGAGGTTGAAAAGTGCTGGGAAAGTCTTCTTCTTAGCAAGATCACCAGAAGCACC
JMSF042L05+           GCGATAGAGGTTGAAAAGTGCTGGGAAAGTCTTCTTCTTAGCAAGATCACCAGAAGCACC
                      ____________________________________________________________
consensus             GCGATAGAGGTTGAAAAGTGCTGGGAAAGTCTTCTTCTTAGCAAGATCACCAGAAGCACC
 
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JMSF035G07+           AAGAACAATGATGGAGAGACACCCAGTTTCTGGGACATTGTCATTGTCCCTAAAAGATTC
JMSF036L23+           AAGAACAATGATGGAGAGACACCCAGTTTC                              
JMSF042L05+           AAGAACAATGATGGAGAGACACCCAGTTTCTGGGACATTGTCATTGTCCCTAAAAGATTC
                      ____________________________________________________________
consensus             AAGAACAATGATGGAGAGACACCCAGTTTCTGGGACATTGTCATTGTCCCTAAAAGATTC
 
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JMSF035G07+           ATTCCTAAACGAACCCCTTTTCTCTACGCACCATTGACCAGATTCCATCTCCAAAGCTTC
JMSF042L05+           ATTCCTAAACGAACCCCTTTTCTCTACGCACCATTGACCAGATTCCATCTCCAAAGCTTC
                      ____________________________________________________________
consensus             ATTCCTAAACGAACCCCTTTTCTCTACGCACCATTGACCAGATTCCATCTCCAAAGCTTC
 
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JMSF035G07+           TATTAATCACTCCTCCACTGTATGATCGCTTATTATCTTCTGATCGGAAAATTGGAAG  
JMSF042L05+           TATTAATCACTCCTCCACTGTATGATCGCTTATTATCTTCTGATCGGAAAATTGGAAGCC
                      ____________________________________________________________
consensus             TATTAATCACTCCTCCACTGTATGATCGCTTATTATCTTCTGATCGGAAAATTGGAAGCC