Contig 000901:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN039B16Sequence570000901 (3)dbj|BAD93924.1|2e-58phosphoprotein phosphatase like protein [Arabidopsis thaliana]
JMSF038M21Sequence705012110 (2)ref|XP_009603850.1|6e-68PREDICTED: serine/threonine-protein phosphatase 5 isoform X1 [Nicotiana tomento872000901 (3)ref|XP_010525314.1|7e-126PREDICTED: serine/threonine-protein phosphatase 5 isoform X3 [Tarenaya hassleri
JMSF040C10Sequence684000901 (3)ref|XP_010112897.1|4e-07Serine/threonine-protein phosphatase 5 [Morus notabilis] gb|EXC35032.1| Serine/t866024646

Alignment

This contig is upended


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JMFN039B16+                                 CGATCAATAACAATCTGNCACAAATGGATACAGATAAA
rJMSF038M21-                                                      AATGGATACAGATAAA
                      ____________________________________________________________
consensus                                   CGATCAATAACAATCTGNCACAAATGGATACAGATAAA
 
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JMFN039B16+           CAGAGTGGCAATACATTCCTGACGATCTTGTTATTTGGGCGGGCTATTACAACTAAACCT
rJMSF038M21-          CAGAGTGGCAATACATTCCTGACGATCTTGTTATTTGGGCGGGCTATTACAACTAAACCT
                      ____________________________________________________________
consensus             CAGAGTGGCAATACATTCCTGACGATCTTGTTATTTGGGCGGGCTATTACAACTAAACCT
 
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JMFN039B16+           ATATTTTCTTTCAACACAAACAAAATCTGTGACAATTCTTATAAGCAGTGAGGAAAGTCC
rJMSF038M21-          ATATTTTCTTTCAACACAAACAAAATCTGTGACAATTCTTATAAGCAGTGAGGAAAGTCC
                      ____________________________________________________________
consensus             ATATTTTCTTTCAACACAAACAAAATCTGTGACAATTCTTATAAGCAGTGAGGAAAGTCC
 
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JMFN039B16+           CAAAAAATATCGGCTAGAGAATTGTATAGTCAACAAGATCGAGCCAGCCCTACCTTCACC
rJMSF038M21-          CAAAAAATATCGGCTAGAGAATTGTATAGTCAACAAGATCGAGCCAGCCCTACCTTCACC
                      ____________________________________________________________
consensus             CAAAAAATATCGGCTAGAGAATTGTATAGTCAACAAGATCGAGCCAGCCCTACCTTCACC
 
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JMFN039B16+           CGCCTTTCAGGACAACTCCGCTCTCTGCCAGCAGCTTGCAAAATCCGTTATGCTTGGGGA
rJMSF038M21-          CGCCTTTCAGGACAACTCCGCTCTCTGCCAGCAGCTTGCAAAATCCGTTATGCTTGGGGA
                      ____________________________________________________________
consensus             CGCCTTTCAGGACAACTCCGCTCTCTGCCAGCAGCTTGCAAAATCCGTTATGCTTGGGGA
 
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JMFN039B16+           CTATGAGAACATCCGAAGGAAGTTGTTGGCATATGCCATTGGCTTGACATCAGGGTGTGG
rJMSF038M21-          CTATGAGAACATCCGAAGGAAGTTGTTGGCATATGCCATTGGCTTGACATCAGGGTGTGG
                      ____________________________________________________________
consensus             CTATGAGAACATCCGAAGGAAGTTGTTGGCATATGCCATTGGCTTGACATCAGGGTGTGG
 
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JMFN039B16+           CACAGCTGAAAATGTGACAATATTTGGTTTAAGCTGAGGAGCTTGGAAACGGATAAAAGC
rJMSF038M21-          CACAGCTGAAAATGTGACAATATTTGGTTTAAGCTCAGGAGCTTGGAAACGGATAAAAGC
                      ____________________________________________________________
consensus             CACAGCTGAAAATGTGACAATATTTGGTTTAAGCTGAGGAGCTTGGAAACGGATAAAAGC
 
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JMFN039B16+           TCCCTTGTTACCCATCTGATCACAGTAGTTTGGAGCAGAGAACACAGTGATGAGTTTACC
rJMSF038M21-          TCCCTTGTTACCCATCTGATCACAGTAGTTTGGAGCAGAGAACACAGTGATGAGTTTACC
                      ____________________________________________________________
consensus             TCCCTTGTTACCCATCTGATCACAGTAGTTTGGAGCAGAGAACACAGTGATGAGTTTACC
 
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JMFN039B16+           ATCATGGTCAATCTCATACCCTTCATCTTTTACTTCATGAGATCGCACAACTAACTCTAG
rJMSF038M21-          ATCATGGTCAATCTCATACCCTTCATCTTTTACTTCATGAGATCGCACAACTAACTCTAG
                      ____________________________________________________________
consensus             ATCATGGTCAATCTCATACCCTTCATCTTTTACTTCATGAGATCGCACAACTAACTCTAG
 
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JMFN039B16+           ATTATTGTCCTGCAAAAATCTTTTTGTTACATCCCCGCCAAATGAGAGACCA        
rJMSF038M21-          ATTATTGTCCTGCAAAAATCTTTTTGTTACATCCCCGCCAAATGAGAGACCAACACCACG
                      ____________________________________________________________
consensus             ATTATTGTCCTGCAAAAATCTTTTTGTTACATCCCCGCCAAATGAGAGACCAACACCACG
 
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rJMSF038M21-          TTTACTAGGTCCTCTCCCAGGTTGAGGTTGTGGATCACTCCACAAAAGTTCACACATCAA
                      ____________________________________________________________
consensus             TTTACTAGGTCCTCTCCCAGGTTGAGGTTGTGGATCACTCCACAAAAGTTCACACATCAA
 
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rJMSF038M21-          CCCTTCTTCTGGTGGCTCACAAAACCGATCAATTGCCCTAATATCAGAGAGCTTCACACC
JMSF040C10+                                  ACCGATCAATTGCTCTAATATTAGAGAGCTTCACACC
                      ____________________________________________________________
consensus             CCCTTCTTCTGGTGGCTCACAAAACCGATCAATTGCTCTAATATTAGAGAGCTTCACACC
 
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rJMSF038M21-          ATCAACACTAAAAAGCCCTCCGTGGACAACAA                            
JMSF040C10+           ATCAACACTAAAAAGCCCTCCGTGGACAACAAGAAATAAGAATCTTCCCATAGGTAAGGA
                      ____________________________________________________________
consensus             ATCAACACTAAAAAGCCCTCCGTGGACAACAAGAAATAAGAATCTTCCCATAGGTAAGGA
 
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JMSF040C10+           TAAACAACAAATTACTTCAGCAAATTTCAAGCATAAGAAGCATAAATGAAATTTTACCCG
                      ____________________________________________________________
consensus             TAAACAACAAATTACTTCAGCAAATTTCAAGCATAAGAAGCATAAATGAAATTTTACCCG
 
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JMSF040C10+           TACAGGGTGTCTTCTTCGTATTCTGGTCGCCACCGTCGGAACCCAGCCATCCTCCGTCGT
                      ____________________________________________________________
consensus             TACAGGGTGTCTTCTTCGTATTCTGGTCGCCACCGTCGGAACCCAGCCATCCTCCGTCGT
 
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JMSF040C10+           CTCTCTTCACCGCAGCACCAAATGGTTGCGCTATTCGACAGATTTTGCCCTAGCCGACAG
                      ____________________________________________________________
consensus             CTCTCTTCACCGCAGCACCAAATGGTTGCGCTATTCGACAGATTTTGCCCTAGCCGACAG
 
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JMSF040C10+           ATCTCGAGTCTCAACCAGTTGAGATACTAAATCGGCGGAACAGATCTGAAGATGGCGGCA
                      ____________________________________________________________
consensus             ATCTCGAGTCTCAACCAGTTGAGATACTAAATCGGCGGAACAGATCTGAAGATGGCGGCA
 
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JMSF040C10+           ACGGCGGTGGCGGTGCGTGGAAGGCGGCGGCGGCTCATCGTGGCGGTGGCGTTGTTAAAG
                      ____________________________________________________________
consensus             ACGGCGGTGGCGGTGCGTGGAAGGCGGCGGCGGCTCATCGTGGCGGTGGCGTTGTTAAAG
 
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JMSF040C10+           CTTTGTCTCCCTCCAATCGGCGAAGAAACTACTGGAAGAGAGAAAAAGCTAAAGTGGAGA
                      ____________________________________________________________
consensus             CTTTGTCTCCCTCCAATCGGCGAAGAAACTACTGGAAGAGAGAAAAAGCTAAAGTGGAGA
 
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JMSF040C10+           GGAGAGTAAAATCTAAATGGAAGAAACATTATAATGCTGTTGGGATTATTTTTCGCGGCC
                      ____________________________________________________________
consensus             GGAGAGTAAAATCTAAATGGAAGAAACATTATAATGCTGTTGGGATTATTTTTCGCGGCC