clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMSF029B04 | Sequence | 674 | 000888 (3) | ref|XP_004237909.1| | 2e-35 | PREDICTED: probable mitochondrial adenine nucleotide transporter BTL3 [Solanum | 725 | 005768 (3) | gb|EYU36503.1| | 3e-90 | hypothetical protein MIMGU_mgv1a007343mg [Erythranthe guttata] |
JMSF038G03 | Sequence | 675 | 000888 (3) | ref|XP_004237909.1| | 2e-35 | PREDICTED: probable mitochondrial adenine nucleotide transporter BTL3 [Solanum | 891 | 005768 (3) | gb|EYU36503.1| | 4e-115 | hypothetical protein MIMGU_mgv1a007343mg [Erythranthe guttata] |
JMSF041M15 | Sequence | 759 | 000888 (3) | ref|XP_004237909.1| | 3e-54 | PREDICTED: probable mitochondrial adenine nucleotide transporter BTL3 [Solanum | 639 | 005768 (3) | gb|EYU36503.1| | 4e-70 | hypothetical protein MIMGU_mgv1a007343mg [Erythranthe guttata] |
This contig is upended
. : . : . : . : . : . :
JMSF041M15+ TCAGAAGTGCTTTNTATAAGTATCATAAGCACAAAAGTTG
____________________________________________________________
consensus TCAGAAGTGCTTTNTATAAGTATCATAAGCACAAAAGTTG
. : . : . : . : . : . :
JMSF041M15+ ACTGCCTTAAAAGGAGCAGTACGAAGAATGTTAACAAAGTTCCCCTTCCAAAAGCCTCTC
JMSF029B04+ TTCCAAAAGCCTCTC
JMSF038G03+ TTCCAAAAGCCTCTC
____________________________________________________________
consensus ACTGCCTTAAAAGGAGCAGTACGAAGAATGTTAACAAAGTTCCCCTTCCAAAAGCCTCTC
. : . : . : . : . : . :
JMSF041M15+ AAGCCTTGTGTAGTTGCAATCACTTTGATGAGTTCAAATATGTTCCTCTGTTCACCGCGA
JMSF029B04+ AAGCCTTGTGTAGTTGCAATCACTTTGATGAGTTCAAATATGTTCCTCTGTTCACCGCGA
JMSF038G03+ AAGCCTTGTGTAGTTGCAATCACTTTGATGAGTTCAAATATGTTCCTCTGTTCACCGCGA
____________________________________________________________
consensus AAGCCTTGTGTAGTTGCAATCACTTTGATGAGTTCAAATATGTTCCTCTGTTCACCGCGA
. : . : . : . : . : . :
JMSF041M15+ ACTATATATTCCAGCTTTAATCTCTCAAGTGGAGCCACAAAAGTTCTTGATACCATAGCG
JMSF029B04+ ACTATATATTCCAGCTTTAATCTCTCAAGTGGAGCCACAAAAGTTCTTGATACCATAGCG
JMSF038G03+ ACTATATATTCCAGCTTTAATCTCTCAAGTGGAGCCACAAAAGTTCTTGATACCATAGCG
____________________________________________________________
consensus ACTATATATTCCAGCTTTAATCTCTCAAGTGGAGCCACAAAAGTTCTTGATACCATAGCG
. : . : . : . : . : . :
JMSF041M15+ GCAACAGCGCCAGCCCATAAGTGCTTACTAGTATTCACAGCGCCCTGTTTCCCAAACCCA
JMSF029B04+ GCAACAGCGCCAGCCCATAAGTGCTTACTAGTATTCACAGCGCCCTGTTTCCCAAACCCA
JMSF038G03+ GCAACAGCGCCAGCCCATAAGTGCTTACTAGTATTCACAGCGCCCTGTTTCCCAAACCCA
____________________________________________________________
consensus GCAACAGCGCCAGCCCATAAGTGCTTACTAGTATTCACAGCGCCCTGTTTCCCAAACCCA
. : . : . : . : . : . :
JMSF041M15+ ATCCCTCGCCGCCGTCCCAAGGTTGCGCCACCTTCCCCGCCTCCTACACTACCAACCTTA
JMSF029B04+ ATCCCTCGCCGCCGTCCCAAGGTTGCGCCACCTTCCCCGCCTCCTACACTACCAACCTTA
JMSF038G03+ ATCCCTCGCCGCCGTCCCAAGGTTGCGCCACCTTCCCCGCCTCCTACACTACCAACCTTA
____________________________________________________________
consensus ATCCCTCGCCGCCGTCCCAAGGTTGCGCCACCTTCCCCGCCTCCTACACTACCAACCTTA
. : . : . : . : . : . :
JMSF041M15+ TTGCCGTTAAGCACCAAACAATCCCCGGAATTCCCGTTAAGCCCATCCCCTTTTTTCTCC
JMSF029B04+ TTGCCGTTAAGCACCAAACAATCCCCGGAATTCCCGTTAAGCCCATCCCCTTTTTTCTCC
JMSF038G03+ TTGCCGTTAAGCACCAAACAATCCCCGGAATTCCCGTTAAGCCCATCCCCTTTTTTCTCC
____________________________________________________________
consensus TTGCCGTTAAGCACCAAACAATCCCCGGAATTCCCGTTAAGCCCATCCCCTTTTTTCTCC
. : . : . : . : . : . :
JMSF041M15+ CCTATCGACAAGCTCACAGATAAAAACAACTCCCCACTAGCACTTCCTCTGCGGAACCCC
JMSF029B04+ CCTATCGACAAGCTCACAGATAAAAACAACTCCCCACTAGCACTTCCTCTGCGGAACCCC
JMSF038G03+ CCTATCGACAAGCTCACAGATAAAAACAACTCCCCACTAGCACTTCCTCTGCGGAACCCC
____________________________________________________________
consensus CCTATCGACAAGCTCACAGATAAAAACAACTCCCCACTAGCACTTCCTCTGCGGAACCCC
. : . : . : . : . : . :
JMSF041M15+ GGCCTCCGGCGAGATTTTCCAGTTAATGCGTTTAAAATCGAAGGCGGTGCCGCGGGCTCG
JMSF029B04+ GGCCTCCGGCGAGATTTTCCAGTTAATGCGTTTAAAATCGAAGGCGGTGCCGCGGGCTCG
JMSF038G03+ GGCCTCCGGCGAGATTTTCCAGTTAATGCGTTTAAAATCGAAGGCGGTGCCGCGGGCTCG
____________________________________________________________
consensus GGCCTCCGGCGAGATTTTCCAGTTAATGCGTTTAAAATCGAAGGCGGTGCCGCGGGCTCG
. : . : . : . : . : . :
JMSF041M15+ AGAAACAAGCCTCCGGAGAAGATAATCGAAGCTGGGGTGTCGAGATTTTGCGATTGATGT
JMSF029B04+ AGAAACAAGCCTCCGGAGAAGATAATCGAAGCTGGGGTGTCGAGATTTTGCGATTGATGT
JMSF038G03+ AGAAACAAGCCTCCGGAGAAGATAATCGAAGCTGGGGTGTCGAGATTTTGCGATTGATGT
____________________________________________________________
consensus AGAAACAAGCCTCCGGAGAAGATAATCGAAGCTGGGGTGTCGAGATTTTGCGATTGATGT
. : . : . : . : . : . :
JMSF041M15+ TGAGACGGTAGATAACTCTTGAGCCGGATTGCGTTGTCGGGTCTTGGCATTTTTGTGAAG
JMSF029B04+ TGAGACGGTAGATAACTCTTGAGCCGGATTGCGTTGTCGGGTCTTGGCATTTTTGTGAAG
JMSF038G03+ TGAGACGGTAGATAACTCTTGAGCCGGATTGCGTTGTCGGGTCTTGGCATTTTTGTGAAG
____________________________________________________________
consensus TGAGACGGTAGATAACTCTTGAGCCGGATTGCGTTGTCGGGTCTTGGCATTTTTGTGAAG
. : . : . : . : . : . :
JMSF041M15+ TGCAGTTTCGGGGATTTCTAGACATTCAAGCTGTGTGATTTGTGCGAAAATGGTGGCGTT
JMSF029B04+ TGCAGTTTCGGGGATTTCTAGACATTCAAGCTGTGTGATTTGTGCGAAAATGGTGGCGTT
JMSF038G03+ TGCAGTTTCGGGGATTTCTAGACATTCAAGCTGTGTGATTTGTGCGAAAATGGTGGCGTT
____________________________________________________________
consensus TGCAGTTTCGGGGATTTCTAGACATTCAAGCTGTGTGATTTGTGCGAAAATGGTGGCGTT
. : . : . : . : . : . :
JMSF041M15+ AGAGGATACTGGAAATGGCGGACTCTCAGCTTTGCTTCCATCGCCGCACACACCCC
JMSF029B04+ AGAGGATACTGGAAATGGCGGACTCTCAGCTTTGCTTCCATCGCCGCACACACCCC
JMSF038G03+ AGAGGATACTGGAAATGGCGGACTCTCAGCTTTGCTTCCATCGCCGCACACACCCCAACC
____________________________________________________________
consensus AGAGGATACTGGAAATGGCGGACTCTCAGCTTTGCTTCCATCGCCGCACACACCCCAACC