clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF006E11 | Sequence | 567 | 000887 (8) | ref|XP_009601157.1| | 9e-49 | PREDICTED: 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic- | |||||
JMFF007H03 | Sequence | 134 | 000887 (8) | ref|XP_010279287.1| | 7e-06 | PREDICTED: 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic | |||||
JMFF047K24 | Sequence | 470 | 000887 (8) | ref|XP_009601157.1| | 8e-48 | PREDICTED: 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic- | 476 | 000887 (8) | gb|KJB22974.1| | 3e-50 | hypothetical protein B456_004G076300 [Gossypium raimondii] |
JMFS009H07 | Sequence | 619 | 000887 (8) | gb|ADZ24708.1| | 4e-88 | 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase 1 [Solanum pennellii] | |||||
JMFS015H10 | Sequence | 541 | 000887 (8) | gb|ADZ24708.1| | 8e-68 | 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase 1 [Solanum pennellii] | |||||
JMSF038D10 | Sequence | 600 | 000887 (8) | ref|XP_009601157.1| | 5e-60 | PREDICTED: 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic- | 887 | 000887 (8) | ref|XP_009796397.1| | 3e-148 | PREDICTED: 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic- |
This contig is upended
. : . : . : . : . : . :
rJMFF047K24- CCTTATGGCGGATCACCCTGGAGAGTTTTT
____________________________________________________________
consensus CCTTATGGCGGATCACCCTGGAGAGTTTTT
. : . : . : . : . : . :
rJMFF047K24- TTTTTTTTTTTACATCAATGACACACATGAGCATATTACTGACAGTAGCAACAAGCACCA
rJMSF038D10- TACTGACAGTAGCAACAAGCACCA
____________________________________________________________
consensus TTTTTTTTTTTACATCAATGACACACATGAGCATATTACTGACAGTAGCAACAAGCACCA
. : . : . : . : . : . :
rJMFF047K24- CACTACATTCATATAATAATACATTTATTATTACGACAGTAGCTCACCTAATAATCTATA
rJMSF038D10- CACTACATTCATATAATAATACATTTATTATTACGACAGTAGCTCACCTAATAATCTATA
____________________________________________________________
consensus CACTACATTCATATAATAATACATTTATTATTACGACAGTAGCTCACCTAATAATCTATA
. : . : . : . : . : . :
rJMFF047K24- AAACCAGGAAACTACGAGATCTTCTCTGCTATTTCTCATATTGGTTGGTCTTTCGGAACG
rJMSF038D10- AAACCAGGAAACTACGAGATCTTCTCTGCTATTTCTCATATTGGTTGGTCTTTCGGAACG
____________________________________________________________
consensus AAACCAGGAAACTACGAGATCTTCTCTGCTATTTCTCATATTGGTTGGTCTTTCGGAACG
. : . : . : . : . : . :
rJMFF047K24- ATCTGATCCTTGAGCCACATATATATGGGAACCAAAACATAATATGCTCCTGCCATGGCC
rJMSF038D10- ATCTGATCCTTGAGCCACATATATATGGGAACCAAAACATAATATGCTCCTGCCATGGCC
____________________________________________________________
consensus ATCTGATCCTTGAGCCACATATATATGGGAACCAAAACATAATATGCTCCTGCCATGGCC
. : . : . : . : . : . :
rJMFF047K24- CCTAACATGAAGCGCAGAAGAAACACAAGCGGATTCACGGGCTTTGAGACATCCTCAGCC
rJMSF038D10- CCCAACATGAAGCGCAGAAGAAACACAAGCGGATTCACGGGCTTTGAGACATCCTCAGCC
____________________________________________________________
consensus CCTAACATGAAGCGCAGAAGAAACACAAGCGGATTCACGGGCTTTGAGACATCCTCAGCC
. : . : . : . : . : . :
rJMFF047K24- TTTGGACCAAGCTGTAGCGGTGAGTCTCCAGAGTCGGTTTTTACACCAGTTACGGAGCAG
rJMSF038D10- TTTGGACCAAGCTGTAGCGGTGAGTCTCCAGAGTCGGTTTTTACACCAGTTACGGAGCAG
____________________________________________________________
consensus TTTGGACCAAGCTGTAGCGGTGAGTCTCCAGAGTCGGTTTTTACACCAGTTACGGAGCAG
. : . : . : . : . : . :
rJMFF047K24- CCCATGATCAGACCATGTCTACGAACCCCACGGTACCATTTTGGGCCAATCCTCTTGANG
rJMSF038D10- CCCATGATCAGACCATGTCTACGAACCCCACGGTACCATTTTGGGCCAATCCTCTTGAGT
____________________________________________________________
consensus CCCATGATCAGACCATGTCTACGAACCCCACGGTACCATTTTGGGCCAATCCTCTTGAGT
. : . : . : . : . : . :
rJMFF047K24- TGAACATCCCTTAATCCAGCCTTTTC
rJMSF038D10- TGAACATCCTTAAATCCAGCCTTTTCAAACCACTCAAGATACTCCGACTCCTTTGGAAAG
____________________________________________________________
consensus TGAACATCCTTTAATCCAGCCTTTTCAAACCACTCAAGATACTCCGACTCCTTTGGAAAG
. : . : . : . : . : . :
rJMSF038D10- AGCATCCAGACATCAGCAAAGAATCGCGACAGCCAAAACGTCGGGTGAACAGGACCAATT
____________________________________________________________
consensus AGCATCCAGACATCAGCAAAGAATCGCGACAGCCAAAACGTCGGGTGAACAGGACCAATT
. : . : . : . : . : . :
rJMSF038D10- AGGCAAGCCTTTCCTCCAGGTTTTAAAACTCTGTATGCTTCCCTGATTCCACGCTGTGGG
____________________________________________________________
consensus AGGCAAGCCTTTCCTCCAGGTTTTAAAACTCTGTATGCTTCCCTGATTCCACGCTGTGGG
. : . : . : . : . : . :
rJMSF038D10- TCTGGCCAGTACTCAATACTCCCAGCAGAAACATATCTATCAGCATAATCAGTGGTGAAG
JMFS009H07+ CCAGTACTCAATACTCCCAGCAGAAACATATCTATCAGCATAATCAGTGGTGAAG
____________________________________________________________
consensus TCTGGCCAGTACTCAATACTCCCAGCAGAAACATATCTATCAGCATAATCAGTGGTGAAG
. : . : . : . : . : . :
rJMFF007H03- GATTTTGCAATCCTTCAAGGGCTCCTTCTCCTTA
rJMSF038D10- GGAAGATCCTCAGCATCACCCTCAATGATTTTGCAATCCTTCAAGGGCTCCTTCTCCTTA
JMFS015H10+ GATTTTGCAATCCTTCAAGGGCTCCTTCTCCTTA
JMFS009H07+ GGAAGATCCTCAGCATCACCCTCAATGATTTTGCAATCCTTCAAGGGCTCCTTCTCCTTA
____________________________________________________________
consensus GGAAGATCCTCAGCATCACCCTCAATGATTTTGCAATCCTTCAAGGGCTCCTTCTCCTTA
. : . : . : . : . : . :
rJMFF007H03- NCCTTANCAAGCTGGTGAGGGGACTGATCAAGAATGGTAACATTCTTGGCATCCACATGC
rJMSF038D10- GCCTTAGCAAGCTGGTGAGGGGACTGATCAAGAATGGTAACATTCTTGGCATCCACATGC
JMFS015H10+ GCCTTAGCAAGCTGGTGAGGGGACTGATCAAGAATGGTAACATTCTTGGCATCCACATGC
JMFS009H07+ GCCTTAGCAAGCTGGTGAGGGGACTGATCAAGAATGGTAACATTCTTGGCATCCACATGC
JMFF006E11+ CCTTAGCAAGCTGGTGAGGGGACTGATCAAGAATGGTAACATTCTTGGCATCCACATGC
JMFF047K24+ GCATCCACATGC
JMSF038D10+ CCTTAGCAAGCTGGTGAGGGGACTGATCAAGAATGGTAACATTCTTGGCATCCACATGC
____________________________________________________________
consensus GCCTTAGCAAGCTGGTGAGGGGACTGATCAAGAATGGTAACATTCTTGGCATCCACATGC
. : . : . : . : . : . :
rJMFF007H03- TTCACTATCCCCANAGTGGTGAACCCTGTGCCACCCCCAA
rJMSF038D10- TTCACTATCCCCAGAGTGGTGAACCCTGTGCCACCCCCAA-CATCCACCACAGTCAAATT
JMFS015H10+ TTCACTATCCCCAGAGTGGTGAACCCTGTGCCACCCCCAA-CATCCACCACAGTCAAATT
JMFS009H07+ TTCACTATCCCCAGAGTGGTGAACCCTGTGCCACCCCCAA-CATCCACCACAGTCAAATT
JMFF006E11+ TTCACTATCCCCAGAGTGGTGAACCCTGTGCCACCCCCAACCATCCACCACAGTCAAATT
JMFF047K24+ TTCACTATCCCCAGAGTGGTGAACCCTGTGCCACCCCCAA-CATCCACCACAGTCAAATT
JMSF038D10+ TTCACTATCCCCAGAGTGGTGAACCCTGTGCCACCCCCAA-CATCCACCACAGTCAAATT
____________________________________________________________
consensus TTCACTATCCCCAGAGTGGTGAACCCTGTGCCACCCCCAA-CATCCACCACAGTCAAATT
. : . : . : . : . : . :
rJMSF038D10- CCTGTCATTCAGCTCAGCTGGTTCAAGGGCATCATCTCTCATGTCTTCTGT-CNGTGNCC
JMFS015H10+ CCTGTCATTCAGCTCAGCTGGTTCAAGGGCATCATCTCTCATGTCTTCTGTCCAGTGCCC
JMFS009H07+ CCTGTCATTCAGCTCAGCTGGTTCAAGGGCATCATCTCTCATGTCTTCTGTCCAGTGCCC
JMFF006E11+ CCTGTCATTCAGCTCAGCTGGTTCAAGGGCATCATCTCTCATGTCTTCTGTCCAGTGCCC
JMFF047K24+ CCTGTCATTCAGCTCAGCTGGTTCAAGGGCATCATCTCTCATGTCTTCTGTCCAGTGCCC
JMSF038D10+ CCTGTCATTCAGCTCAGCTGGTTCAAGGGCATCATCTCTCATGTCTTCTGTCCAGTGCCC
____________________________________________________________
consensus CCTGTCATTCAGCTCAGCTGGTTCAAGGGCATCATCTCTCATGTCTTCTGTCCAGTGCCC
. : . : . : . : . : . :
rJMSF038D10- TGGGTTTATCACATGGTCATACACA
JMFS015H10+ TGGGTTTATCACATGGTCATACACAATAGAGAGGAACCTGTAGAACCAAAATGCCTCCTG
JMFS009H07+ TGGGTTTATCACATGGTCATACACAATAGAGAGGAACCTGTAGAACCAAAATGCCTCCTG
JMFF006E11+ TGGGTTTATCACATGGTCATACACAATAGAGAGGAACCTGTAGAACCAAAATGCCTCCTG
JMFF047K24+ TGGGTTTATCACATGGTCATACACAATAGAGAGGAACCTGTAGAACCAAAATGCCTCCTG
JMSF038D10+ TGGGTTTATCACATGGTCATACACAATAGAGAGGAACCTGTAGAACCAAAATGCCTCCTG
____________________________________________________________
consensus TGGGTTTATCACATGGTCATACACAATAGAGAGGAACCTGTAGAACCAAAATGCCTCCTG
. : . : . : . : . : . :
JMFS015H10+ CTTGTGCTGAATGAATCTTGGCATTGAGACTGGCCTGGATGCAGAAATGCTGCATTTTGG
JMFS009H07+ CTTGTGCTGAATGAATCTTGGCATTGAGACTGGCCTGGATGCAGAAATGCTGCATTTTGG
JMFF006E11+ CTTGTGCTGAATGAATCTTGGCATTGAGACTGGCCTGGATGCAGAAATGCTGCATTTTGG
JMFF047K24+ CTTGTGCTGAATGAATCTTGGCATTGAGACTGGCCTGGATGCAGAAATGCTGCATTTTGG
JMSF038D10+ CTTGTGCTGAATGAATCTTGGCATTGAGACTGGCCTGGATGCAGAAATGCTGCATTTTGG
____________________________________________________________
consensus CTTGTGCTGAATGAATCTTGGCATTGAGACTGGCCTGGATGCAGAAATGCTGCATTTTGG
. : . : . : . : . : . :
JMFS015H10+ AGCTAGGGTTTGATTCTTTCTTCTGGGTTGAGAAAACAGACTCAGATTGGGAAGTTGGGT
JMFS009H07+ AGCTAGGGTTTGATTCTTTCTTCTGGGTTGAGAAAACAGACTCAGATTGGGAAGTTGGGT
JMFF006E11+ AGCTAGGGTTTGATTCTTTCTTCTGGGTTGAGAAAACAGACTCAGATTGGGAAGTTGGGT
JMFF047K24+ AGCTAGGGTTTGATTCTTTCTTCTGGGTTGAGAAAACAGACTCAGATTGGGAAGTTGGGT
JMSF038D10+ AGCTAGGGTTTGATTCTTTCTTCTGGGTTGAGAAAACAGACTCAGATTGGGAAGTTGGGT
____________________________________________________________
consensus AGCTAGGGTTTGATTCTTTCTTCTGGGTTGAGAAAACAGACTCAGATTGGGAAGTTGGGT
. : . : . : . : . : . :
JMFS015H10+ TCCTCTCACATTTGAGCCAATAAAAGATAGCCCCTTTGGGTTTTGGCTAATTTTTGGGAG
JMFS009H07+ TCCTCTCACATTTGAGCCAATAAAAGATAGCCCCTTTGGGTTTTGGCTAATTTTTGGGAG
JMFF006E11+ TCCTCTCACATTTGAGCCAATAAAAGATAGCCCCTTTGGGTTTTGGCTAATTTTTGGGAG
JMFF047K24+ TCCTCTCACATTTGAGCCAATAAAAGATAGCCCCTTTGGGTTTTGGCTAATTTTTGGGAG
JMSF038D10+ TCCTCTCACATTTGAGCCAATAAAAGATAGCCCCTTTGGGTTTTGGCTAATTTTTGGGAG
____________________________________________________________
consensus TCCTCTCACATTTGAGCCAATAAAAGATAGCCCCTTTGGGTTTTGGCTAATTTTTGGGAG
. : . : . : . : . : . :
JMFS015H10+ AATACAGAGACTCTCAGCAGCAATGAGCATCGAATTGGCCATGGAATCTTTCTGGAATCT
JMFS009H07+ AATACAGAGACTCTCAGCAGCAATGAGCATCGAATTGGCCATGGAATCTTTCTGGAATCT
JMFF006E11+ AATACAGAGACTCTCAGCAGCAATGAGCATCGAATTGGCCATGGAATCTTTCTGGAATCT
JMFF047K24+ AATACAGAGACTCTCAGCAGCAATGAGCATCGAATTGGCCATGGAATCTTTCTGGAATCT
JMSF038D10+ AATACAGAGACTCTCAGCAGCAATGAGCATCGAATTGGCCATGGAATCTTTCTGGAATCT
____________________________________________________________
consensus AATACAGAGACTCTCAGCAGCAATGAGCATCGAATTGGCCATGGAATCTTTCTGGAATCT
. : . : . : . : . : . :
JMFS015H10+ GCGAAAAGATTTTTCCCTTTGTGAA
JMFS009H07+ GCGAAAAGATTTTTCCCTTTGTGAA
JMFF006E11+ GCGAAAAGATTTTTCCCTTTGTGAACAACAGTAGAAAGTACCAAACGAATTAGCACTGAG
JMFF047K24+ GCGAAAAGATTTTTCCCTTTGTGAACAACAGTAGCAAGT
JMSF038D10+ GCGAAAAGATTTTTCCCTTTGTGAACAACAGTAGAAAGTACCAAACGAATTAGCACTGAG
____________________________________________________________
consensus GCGAAAAGATTTTTCCCTTTGTGAACAACAGTAGAAAGTACCAAACGAATTAGCACTGAG
. : . : . : . : . : . :
JMFF006E11+ TCAGTCACTGGGCTAAGTGATGGCAATC
JMSF038D10+ TCAGTCACTGGGCTAAGTGATGGCAATCGGAAGAGAAATGTTACGGACTCCTCAGTCCCC
____________________________________________________________
consensus TCAGTCACTGGGCTAAGTGATGGCAATCGGAAGAGAAATGTTACGGACTCCTCAGTCCCC