Contig 000868:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS015A11Sequence459000868 (5)ref|XP_009594520.1|3e-15PREDICTED: sialidase isoform X2 [Nicotiana tomentosiformis]
JMSF015O18Sequence251000868 (5)ref|XP_009772873.1|1e-04PREDICTED: cell wall protein RBR3 isoform X2 [Nicotiana sylvestris]751012566 (3)ref|XP_009594511.1|3e-75PREDICTED: cell wall protein RBR3 isoform X1 [Nicotiana tomentosiformis]
JMSF036A11Sequence646000868 (5)ref|XP_009594520.1|1e-36PREDICTED: sialidase isoform X2 [Nicotiana tomentosiformis]764023580ref|XP_009594511.1|4e-78PREDICTED: cell wall protein RBR3 isoform X1 [Nicotiana tomentosiformis]
JMSF044G21Sequence790000868 (5)ref|XP_006353835.1|3e-47PREDICTED: putative GPI-anchored protein PB15E9.01c-like [Solanum tuberosum]732012566 (3)ref|XP_009594511.1|1e-75PREDICTED: cell wall protein RBR3 isoform X1 [Nicotiana tomentosiformis]
JMSF051G18Sequence714000868 (5)ref|XP_006353835.1|3e-36PREDICTED: putative GPI-anchored protein PB15E9.01c-like [Solanum tuberosum]709012566 (3)ref|XP_009594520.1|3e-74PREDICTED: sialidase isoform X2 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF044G21+                                                                GAAGATG
                      ____________________________________________________________
consensus                                                                  GAAGATG
 
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JMSF044G21+           AAGAGCGACTTGAAGGGGTAGAGGACCGAATATAGGATGACACAGAAGCAGAGCTCGTGT
JMSF051G18+                                                                 TCGTGT
                      ____________________________________________________________
consensus             AAGAGCGACTTGAAGGGGTAGAGGACCGAATATAGGATGACACAGAAGCAGAGCTCGTGT
 
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JMSF044G21+           TTAGAATATTAGTTGATTTATTTGAGTAAGTACTAAACTGGTTGCTAGAGACAGAGGAAC
JMSF051G18+           TTAGAATATTAGTTGATTTATTTGAGTAAGTACTAAACTGGTTGCTAGAGACAGAGGAAC
                      ____________________________________________________________
consensus             TTAGAATATTAGTTGATTTATTTGAGTAAGTACTAAACTGGTTGCTAGAGACAGAGGAAC
 
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JMSF044G21+           GAGTTACTGAACTGCTGCGTGCTGGTCTTGCATTATGGTTGCTCTCTGAATGTGAAACTG
JMSF051G18+           GAGTTACTGAACTGCTGCGTGCTGGTCTTGCATTATGGTTGCTCTCTGAATGTGAAACTG
                      ____________________________________________________________
consensus             GAGTTACTGAACTGCTGCGTGCTGGTCTTGCATTATGGTTGCTCTCTGAATGTGAAACTG
 
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JMSF044G21+           AAAGCCTTGAAGCCTTAGTTGTGGAGACTGATCTGGCCAAGGAGCTACTTCTTGGAGCTA
JMSF051G18+           AAAGCCTTGAAGCCTTAGTTGTGGAGACTGATCTGGCCAAGGAGCTACTTCTTGGAGCTA
JMSF036A11+                         TTAGTTGTGGAGACTGATCTGGCCAAGGAGCTACTTCTTGGAGCTA
                      ____________________________________________________________
consensus             AAAGCCTTGAAGCCTTAGTTGTGGAGACTGATCTGGCCAAGGAGCTACTTCTTGGAGCTA
 
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JMSF044G21+           CTTGGACCCGTTGAGGTTCATTTCCGATCAATGAAGGAACTAGAGGAGTCTCTGGAGGAG
JMSF051G18+           CTTGGACCCGTTGAGGTTCATTTCCGATCAATGAAGGAACTAGAGGAGTCTCTGGAGGAG
JMSF036A11+           CTTGGACCCGTTGAGGTTCATTTCCGATCAATGAAGGAACTAGAGGAGTCTCTGGAGGAG
                      ____________________________________________________________
consensus             CTTGGACCCGTTGAGGTTCATTTCCGATCAATGAAGGAACTAGAGGAGTCTCTGGAGGAG
 
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JMSF044G21+           TTAGAAGCCAATCATAATCATTCTTTCCTCCCTCAGTAGATGATAACAGATCATCCAATC
JMSF051G18+           TTAGAAGCCAATCATAATCATTCTTTCCTCCCTCAGTAGATGATAACAGATCATCCAATC
JMSF036A11+           TTAGAAGCCAATCATAATCATTCTTTCCTCCCTCAGTAGATGATAACAGATCATCCAATC
                      ____________________________________________________________
consensus             TTAGAAGCCAATCATAATCATTCTTTCCTCCCTCAGTAGATGATAACAGATCATCCAATC
 
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JMSF044G21+           AATTCTTCCCCACCTTTGCTGATCCAACTGAAAGTCTTCCCAGTTTAACGGAAACGTCGG
JMSF051G18+           CATTCTTCCCCACCTTTGCTGATCCAACTGAAAGT-------------------CGTCGG
JMFS015A11+                                                                 CGTCGG
JMSF036A11+           CATTCTTCCCCACCTTTGCTGATCCAACTGAAAGTCTTCCCAGTTTAACGGAAACGTCGG
                      ____________________________________________________________
consensus             CATTCTTCCCCACCTTTGCTGATCCAACTGAAAGTCTTCCCAGTTTAACGGAAACGTCGG
 
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JMSF044G21+           ACTCGTCGGAGTTGACAACGGAGACGCTGCGGCGAGTTCTGGAGAAGAGATCCAAGGAGT
JMSF051G18+           ACTCGTCGGAGTTGACAACGGAGACGCTGCGGCGAGTTCTGGAGAAGAGATCCAAGGAGT
JMFS015A11+           ACTCGTCGGAGTTGACAACGGAGACGCTGCGGCGAGTTCTGGAGAAGAGATCCAAGGAGT
JMSF036A11+           ACTCGTCGGAGTTGACAACGGAGACGCTGCGGCGAGTTCTGGAGAAGAGATCCAAGGAGT
                      ____________________________________________________________
consensus             ACTCGTCGGAGTTGACAACGGAGACGCTGCGGCGAGTTCTGGAGAAGAGATCCAAGGAGT
 
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JMSF044G21+           CATCGGAGGGGTCTTGGTTGGAGGCTCCATTGACGCTAAGGCCACGCCGGAGCTGCGGTG
JMSF051G18+           CATCGGAGGGGTCTTGGTTGGAGGCTCCATTGACGCTAAGGCCACGCCGGAGCTGCGGTG
JMFS015A11+           CATCGGAGGGGTCTTGGTTGGAGGCTCCATTGACGCTAAGGCCACGCCGGAGCTGCGGTG
JMSF015O18+                   GGGTCTTGGTTGGAGGCTCCATTGACGCTAAGGCCACGCCGGAGCTGCGGTG
JMSF036A11+           CATCGGAGGGGTCTTGGTTGGAGGCTCCATTGACGCTAAGGCCACGCCGGAGCTGCGGTG
                      ____________________________________________________________
consensus             CATCGGAGGGGTCTTGGTTGGAGGCTCCATTGACGCTAAGGCCACGCCGGAGCTGCGGTG
 
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JMSF044G21+           CCACCGGAAAACTCTTCCCGCCTCCGATCATAGAGTCCCTAAAGCTCCGATTCATCTCGT
JMSF051G18+           CCACCGGAAAACTCTTCCCGCCTCCGATCATAGAGTCCCTAAAGCTCCGATTCATCTCGT
JMFS015A11+           CCACCGGAAAACTCTTCCCGCCTCCGATCATAGAGTCCCTAAAGCTCCGATTCATCTCGT
JMSF015O18+           CCACCGGAAAACTCTTCCCGCCTCCGATCATAGAGTCCCTAAAGCTCCGATTCATCTCGT
JMSF036A11+           CCACCGGAAAACTCTTCCCGCCTCCGATCATAGAGTCCCTAAAGCTCCGATTCATCTCGT
                      ____________________________________________________________
consensus             CCACCGGAAAACTCTTCCCGCCTCCGATCATAGAGTCCCTAAAGCTCCGATTCATCTCGT
 
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JMSF044G21+           ATCAATCAGTGGCGGTAATCACTCCAGCATTATGAGTAATAGAAGAATTTGTGAGGCTCG
JMSF051G18+           ATCAATCAGTGGCGGTAATCACTCCAGCATTATGAGTAATAGAAGAATTTGTGAGGCTCG
JMFS015A11+           ATCAATCAGTGGCGGTAATCACTCCAGCATTATGAGTAATAGAAGAATTTGTGAGGCTCG
JMSF015O18+           ATCAATCAGTGGCGGTAATCACTCCAGCATTATGAGTAATAGAAGAATTTGTGAGGCTCG
JMSF036A11+           ATCAATCAGTGGCGGTAATCACTCCAGCATTATGAGTAATAGAAGAATTTGTGAGGCTCG
                      ____________________________________________________________
consensus             ATCAATCAGTGGCGGTAATCACTCCAGCATTATGAGTAATAGAAGAATTTGTGAGGCTCG
 
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JMSF044G21+           GCTAGTGCGCCGAACGGACCGGGAAGCCCGAGTCTCCGGCGAGGTTGTAGATTGGATCTG
JMSF051G18+           GCTAGTGCGCCGAACGGACCGGGAAGCCCGAGTCTCCGGCGAGGTTGTAGATTGGATCTG
JMFS015A11+           GCTAGTGCGCCGAACGGACCGGGAAGCCCGAGTCTCCGGCGAGGTTGTAGATTGGATCTG
JMSF015O18+           GCTAGTGCGCCGAACGGACCGGGAAGCCCGAGTCTCCGGCGAGGTTGTAGATTGGATCTG
JMSF036A11+           GCTAGTGCGCCGAACGGACCGGGAAGCCCGAGTCTCCGGCGAGGTTGTAGATTGGATCTG
                      ____________________________________________________________
consensus             GCTAGTGCGCCGAACGGACCGGGAAGCCCGAGTCTCCGGCGAGGTTGTAGATTGGATCTG
 
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JMSF044G21+           TGAGAATGAGAAAAATGTGAGGGAGCTTGGAAAGAGGAAGGGGAAGGAGGCAAAAGCATG
JMSF051G18+           TGAGAATGAGAAAAATGTGAGGGAGCTTGGAAAGAGGAAGGGGAAGGAGGCAAAAGCATG
JMFS015A11+           TGAGAATGAGAAAAATGTGAGGGAGCTTGGAAAGAGGAAGGGGAAGGAGGCAAAAGCATG
JMSF015O18+           TGAGAATGAGAAAAATGT                                          
JMSF036A11+           TGAGAATGAGAAAAATGTGAGGGAGCTTGGAAAGAGGAAGGGGAAGGAGGCAAAAGCATG
                      ____________________________________________________________
consensus             TGAGAATGAGAAAAATGTGAGGGAGCTTGGAAAGAGGAAGGGGAAGGAGGCAAAAGCATG
 
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JMSF044G21+           T                                                           
JMSF051G18+           T                                                           
JMFS015A11+           T                                                           
JMSF036A11+           TTACGCATACTAACAACTGACAGGCAGGTAAGGAAGACAACTCTCTTTCTCTCTCTCTCC
                      ____________________________________________________________
consensus             TTACGCATACTAACAACTGACAGGCAGGTAAGGAAGACAACTCTCTTTCTCTCTCTCTCC