Contig 000861:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF035J13-                                 AGTCTTTATCTTCCACCCGGAATCACCATTCACCAGT
                      ____________________________________________________________
consensus                                    AGTCTTTATCTTCCACCCGGAATCACCATTCACCAGT
 
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rJMSF035J13-          GATGTAAATGCGGGGATTGTCCGGCAATAAATACAATTATACAATCGTGAAGAAACAATA
                      ____________________________________________________________
consensus             GATGTAAATGCGGGGATTGTCCGGCAATAAATACAATTATACAATCGTGAAGAAACAATA
 
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rJMSF035J13-          AATTCAAATTGAGCTACACTATATATGAATTTGATTACCGAAGAAGACAAAACAGAAGGA
                      ____________________________________________________________
consensus             AATTCAAATTGAGCTACACTATATATGAATTTGATTACCGAAGAAGACAAAACAGAAGGA
 
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rJMSF035J13-          AACAAATGCATTTCAAAAGGGGATCATCCAGGGCTACCTTTCGCCCAATAGTGACTCAAA
                      ____________________________________________________________
consensus             AACAAATGCATTTCAAAAGGGGATCATCCAGGGCTACCTTTCGCCCAATAGTGACTCAAA
 
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rJMSF035J13-          AAGAGCAGCCTCTTCTTCCACTAAAGCATTGAATTCTGTCTCCTCATCAATGGCACTTAC
                      ____________________________________________________________
consensus             AAGAGCAGCCTCTTCTTCCACTAAAGCATTGAATTCTGTCTCCTCATCAATGGCACTTAC
 
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rJMSF035J13-          GATTGCAGGGTCTTCCAATAGTTCATCTTCAGCAATTTGAAATACACCATCCTTGTCCTT
                      ____________________________________________________________
consensus             GATTGCAGGGTCTTCCAATAGTTCATCTTCAGCAATTTGAAATACACCATCCTTGTCCTT
 
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rJMSF035J13-          CACAGCAACAAAAAGAAGTGGGTCCGAAGGTGTGTAAATCATATAGTGAGAACCATCTAG
                      ____________________________________________________________
consensus             CACAGCAACAAAAAGAAGTGGGTCCGAAGGTGTGTAAATCATATAGTGAGAACCATCTAG
 
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rJMSF035J13-          ATGGAAGCATGTGATCTCTACGCCCTCAGTTGGCACACCCTCCACGCTGTCACCATCATC
                      ____________________________________________________________
consensus             ATGGAAGCATGTGATCTCTACGCCCTCAGTTGGCACACCCTCCACGCTGTCACCATCATC
 
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rJMSF035J13-          TGTGCAAAGGTCAAATATGTCACCCTCTGTATAGCAAAATCCTCCTCGTGCAGTATAGCA
                      ____________________________________________________________
consensus             TGTGCAAAGGTCAAATATGTCACCCTCTGTATAGCAAAATCCTCCTCGTGCAGTATAGCA
 
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rJMSF035J13-          AAACCCACTATGTACCAGATGCATGTGTATCTTAGCAAGAGCATAGGCTGCCGTAGGGAG
JMFN009I16+                    ATGTACCAGATGCATGTGTATCTTAGCAAGAGCATAGGCTGCCGTAGGGAG
JMSF035J13+                    ATGTACCAGATGCATGTGTATCTTAGCAAGAGCATAGGCTGCCGTAGGGAG
                      ____________________________________________________________
consensus             AAACCCACTATGTACCAGATGCATGTGTATCTTAGCAAGAGCATAGGCTGCCGTAGGGAG
 
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rJMSF035J13-          GATAGTTTCAACTTCTTCATCACTGACAGCTGACCACCCCTCAAAATTCGCACTCTTCAA
JMFN009I16+           GATAGTTTCAACTTCTTCATCACTGACAGCTGACCACCCCTCAAAATTCGCACTCTTCAA
JMSF035J13+           GATAGTTTCAACTTCTTCATCACTGACAGCTGACCACCCCTCAAAATTCGCACTCTTCAA
                      ____________________________________________________________
consensus             GATAGTTTCAACTTCTTCATCACTGACAGCTGACCACCCCTCAAAATTCGCACTCTTCAA
 
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rJMSF035J13-          GATCAGAATAGGCATATCAAGAGGGCAGAG                              
JMFN009I16+           GATCAGAATAGGCATATCAAGAGGGCAGAGTAGCAGGCATTCAACCCCTTGTGTACTTCT
JMSF035J13+           GATCAGAATAGGCATATCAAGAGGGCAGAGTAGCAGGCATTCAACCCCTTGTGTACTTCT
                      ____________________________________________________________
consensus             GATCAGAATAGGCATATCAAGAGGGCAGAGTAGCAGGCATTCAACCCCTTGTGTACTTCT
 
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JMFN009I16+           GAATACCCTCCTTATGATACACTCTAGGGGTAAATTATTGGAGGAATCCACAATTGTAAC
JMSF035J13+           GAATACCCTCCTTATGATACACTCTAGGGGTAAATTATTGGAGGAATCCACAATTGTAAC
                      ____________________________________________________________
consensus             GAATACCCTCCTTATGATACACTCTAGGGGTAAATTATTGGAGGAATCCACAATTGTAAC
 
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JMFN009I16+           AATACGTTTGTTCGAAACCATGAGAACACGGCCTTGCTCGTCCAGCACAAAACCGGCGGG
JMSF005H08+                                                TCGTCCAGCACAAAACCGGCGGG
JMSF035J13+           AATACGTTTGTTCGAAACCATGAGAACACGGCCTTGCTCGTCCAGCACAAAACCGGCGGG
                      ____________________________________________________________
consensus             AATACGTTTGTTCGAAACCATGAGAACACGGCCTTGCTCGTCCAGCACAAAACCGGCGGG
 
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JMFN009I16+           AGGTTTCGGCAGCGGCAGCGGGTGGTAACGTTCGGAAGATGCCGCCCCTCTTTCGTAAAA
JMSF005H08+           AGGTTTCGGCAGCGGCAGCGGGTGGTAACGTTCGGAAGATGCCGCCCCTCTTTCGTAAAA
JMSF035J13+           AGGTTTCGGCAGCGGCAGCGGGTGGTAACGTTCGGAAGATGCCGCCCCTCTTTCGTAAAA
                      ____________________________________________________________
consensus             AGGTTTCGGCAGCGGCAGCGGGTGGTAACGTTCGGAAGATGCCGCCCCTCTTTCGTAAAA
 
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JMFN009I16+           TTCGAGCTCAACATCTTCGTCAATCACCTCGGCTTCCAGAGCAGTACTACCACTGGACCT
JMSF005H08+           TTCGAGCTCAACATCTTCGTCAATCACCTCGGCTTCCAGAGCAGTACTACCACTGGACCT
JMSF035J13+           TTCGAGCTGAACATCTTCGTCAATCACCTCGGCTTCCAGAGCAGTACTACCACTGGACCT
                      ____________________________________________________________
consensus             TTCGAGCTCAACATCTTCGTCAATCACCTCGGCTTCCAGAGCAGTACTACCACTGGACCT
 
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JMFN009I16+           CTTGTTTTTCTTTGTTTTGGAATTTGTTCGCTTCTTCACCGGCCCGGTCTGTTGCTTTGC
JMSF005H08+           CTTGTTTTTCTTTGTTTTGGAATTTGTTCGCTTCTTCACCGGCCCGGTCTGTTGCTTTGC
JMSF035J13+           CTTGTTTTTCTTTGTTTTGGAATTTGTTCGCTTCTTCACCGGCCCGGTCTGTTGCTTTGC
                      ____________________________________________________________
consensus             CTTGTTTTTCTTTGTTTTGGAATTTGTTCGCTTCTTCACCGGCCCGGTCTGTTGCTTTGC
 
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JMFN009I16+           CGCCGCGTAGCAACACATCCTCAACGCTCTGTGATTAGAAGAGCTGAAAACTGGAACTGA
JMSF005H08+           CGCCGCGTAGCAACACATCCTCAACGCTCTGTGATTAGAAGAGCTGAAAACTGGAACTGA
JMSF035J13+           CGCCGCGTAGCAACACATCCTCAACGCTCTGTGATTAGAAGAGCTGAAAACTGGAACTGA
                      ____________________________________________________________
consensus             CGCCGCGTAGCAACACATCCTCAACGCTCTGTGATTAGAAGAGCTGAAAACTGGAACTGA
 
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JMFN009I16+           AATCGGAAACGAAGGTTTGAATCGAGGATTGTAAGATGAGCTTTGAAGAACTACAGAGAG
JMSF005H08+           AATCGGAAACGAAGGTTTGAATCGAGGATTGTAAGATGAGCTTTGAAGAACTACAGAGAG
JMSF035J13+           AATCGGAAACGAAGGTTTGAATCGAGGATTGTAAGATGAGCTTTGAAGAACTACAGAGAG
                      ____________________________________________________________
consensus             AATCGGAAACGAAGGTTTGAATCGAGGATTGTAAGATGAGCTTTGAAGAACTACAGAGAG
 
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JMFN009I16+           ATTTGAAGAAGTAGACGAAGTAGAGATACAGGA                           
JMSF005H08+           ATTTGAAGAAGTAGACGAAGTAGAGATACAGGACGCCATTGACGGTTTTAGAGCTCTT  
JMSF035J13+           ATTTGAAGAAGTAGACGAAGTAGAGATACAGGACGCCATTGACGGTTTTAGAGCTCTTGC
                      ____________________________________________________________
consensus             ATTTGAAGAAGTAGACGAAGTAGAGATACAGGACGCCATTGACGGTTTTAGAGCTCTTGC