Contig 000854:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF034K14Sequence294000854 (3)232000854 (3)
JMSF035K14Sequence196000854 (3)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF034K14+ GGTTGGGGGTGTGGAGCTCTTCTACATCAGAAGATGTCTCTTATACTTTTTGGA
rJMSF035K14+ GGTTGGGGGTGTGGAGCTCTTCTACATCAGAAGATGTCTCTTATACTTTTTGGA
JMSF034K14- GGTTGGGGGTGTGGAGCTCTTCTACATCAGAAGATGTCTCTTATACTTTTTGGA
                      ____________________________________________________________
consensus GGTTGGGGGTGTGGAGCTCTTCTACATCAGAAGATGTCTCTTATACTTTTTGGA
 
. : . : . : . : . : . :
rJMSF034K14+ TACACTCTTGTTTTATTTATTTATTTATACACATGAAAACAAGTCAGGGTTTTATAAGCA
rJMSF035K14+ TACACTCTTGTTTTATTTATTTANTTATACACATGAAAACAAGTCAGGGTTTTATAAGCA
JMSF034K14- TACACTCTTGTTTTATTTATTTATTTATACACATGAAAACAAGTCAGGGTTTTATAAGCA
                      ____________________________________________________________
consensus TACACTCTTGTTTTATTTATTTATTTATACACATGAAAACAAGTCAGGGTTTTATAAGCA
 
. : . : . : . : . : . :
rJMSF034K14+ CCCTTTATTATTTTTTTATTTTTCATTCTATTATTAGGGCAAATGATGTGGTCTAGTTTG
rJMSF035K14+ CCCTTTATTATTTTTTTATTTTTCATTCTATTATTAGGGCAAATGATGTGGTCTAGTTTG
JMSF034K14- CCCTTTATTATTTTTTTATTTTTCATTCTATTATTAGGGCAAATGATGTGGTCTAGTTTG
                      ____________________________________________________________
consensus CCCTTTATTATTTTTTTATTTTTCATTCTATTATTAGGGCAAATGATGTGGTCTAGTTTG
 
. : . : . : . : . : . :
rJMSF034K14+ TGGGATTTACCCTACAATTTTCAATCTTAGATTTATTGAATATGAGGTTGTATGATTT
rJMSF035K14+ TGGGATTTACCC
JMSF034K14- TGGGATTTACCCTACAATTTTCAATCTTAGATTTATTGAATATGAGGTTGTATGATTTTG
                      ____________________________________________________________
consensus TGGGATTTACCCTACAATTTTCAATCTTAGATTTATTGAATATGAGGTTGTATGATTTTG
 
. : . : . : . : . : . :
JMSF034K14- CTAATGGGAAATCCCCTACTCGCAATATATTTATTTGTTACTTCCATTTTAAAAAAAAAA
                      ____________________________________________________________
consensus CTAATGGGAAATCCCCTACTCGCAATATATTTATTTGTTACTTCCATTTTAAAAAAAAAA