Contig 000853:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF034I18Sequence619000853 (2)ref|XP_009613304.1|1e-16PREDICTED: non-specific lipid-transfer protein-like [Nicotiana tomentosiformis]562000853 (2)ref|XP_009613304.1|7e-17PREDICTED: non-specific lipid-transfer protein-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF034I18+                                                   GGAAACTTGAGCCCAAATA
JMSF034I18-                                                    GGAAACTTGAGCCCAAATA
                      ____________________________________________________________
consensus                                                      GGAAACTTGAGCCCAAATA
 
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rJMSF034I18+          AGTGATCAGTGCAAGCTAGCCATTACCCCACTCTTGTTCTTGATCATGAGGCCTTCAAAC
JMSF034I18-           AGTGATCAGTGCAAGCTAGCCATTACCCCACTCTTGTTCTTGATCATGAGGCCTTCAAAC
                      ____________________________________________________________
consensus             AGTGATCAGTGCAAGCTAGCCATTACCCCACTCTTGTTCTTGATCATGAGGCCTTCAAAC
 
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rJMSF034I18+          CAAACTTTGGCTCTCTGTGTGGTTCTTCTCTTGGTTGCAGCACCGGTTTCTCGGGCTGCA
JMSF034I18-           CAAACTTTGGCTCTCTGTGTGGTTCTTCTCTTGGTTGCAGCACCGGTTTCTCGGGCTGCA
                      ____________________________________________________________
consensus             CAAACTTTGGCTCTCTGTGTGGTTCTTCTCTTGGTTGCAGCACCGGTTTCTCGGGCTGCA
 
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rJMSF034I18+          GTTACCTGTGGCAGTGTGCTGAGCACCCTGAAGCCTTGCATTAGCTACCTGCAAGGCGGT
JMSF034I18-           GTTACCTGTGGCAGTGTGCTGAGCACCCTGAAGCCTTGCATTAGCTACCTGCAAGGCGGT
                      ____________________________________________________________
consensus             GTTACCTGTGGCAGTGTGCTGAGCACCCTGAAGCCTTGCATTAGCTACCTGCAAGGCGGT
 
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rJMSF034I18+          GGGGGGCCGTCGCCCCCGGGGACGTGCTGTGGTGGAGTCAAGAGCCTTGCAAGTGCTGCA
JMSF034I18-           GGGGGGCCGTCGCCCCCGGGGACGTGCTGTGGTGGAGTCAAGAGCCTTGCAAGTGCTGCA
                      ____________________________________________________________
consensus             GGGGGGCCGTCGCCCCCGGGGACGTGCTGTGGTGGAGTCAAGAGCCTTGCAAGTGCTGCA
 
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rJMSF034I18+          TCATCCAAGCCAGACAAGCAGACTGCCTGTGGGTGCCTCAAGACTGCAGCCCAGAAGCTG
JMSF034I18-           TCATCCAAGCCAGACAAGCAGACTGCCTGTGGGTGCCTCAAGACTGCAGCCCAGAAGCTG
                      ____________________________________________________________
consensus             TCATCCAAGCCAGACAAGCAGACTGCCTGTGGGTGCCTCAAGACTGCAGCCCAGAAGCTG
 
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rJMSF034I18+          AAGGTCAACACCAACCGCGCCCAGACGCTCCCGCAGGACTGCGGCGTCTCCCTGTCGTTT
JMSF034I18-           AAGGTCAACACCAACCGCGCCCAGACGCTCCCGCAGGACTGCGGCGTCTCCCTGTCGTTT
                      ____________________________________________________________
consensus             AAGGTCAACACCAACCGCGCCCAGACGCTCCCGCAGGACTGCGGCGTCTCCCTGTCGTTT
 
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rJMSF034I18+          CCCATCTCGACTTCTATCGACTGCAGCACAATCAGCTAAGCTTGGAGAGAACAATGATGA
JMSF034I18-           CCCATCTCGACTTCTATCGACTGCAGCACAATCAGCTAAGCTTGGAGAGAACAATGATGA
                      ____________________________________________________________
consensus             CCCATCTCGACTTCTATCGACTGCAGCACAATCAGCTAAGCTTGGAGAGAACAATGATGA
 
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rJMSF034I18+          TATGATATGATATGATGCTGTTGAAAGCACTTATTACTGGGGAGGATAAGTAAATCTTAT
JMSF034I18-           TATGATATGATATGATGCTGTTGAAAGCACTTATTACTGGGGAGGATAAGTAAATCTTAT
                      ____________________________________________________________
consensus             TATGATATGATATGATGCTGTTGAAAGCACTTATTACTGGGGAGGATAAGTAAATCTTAT
 
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rJMSF034I18+          AATAATGTAAAAGTTGGAATGTTTGTGTCTTTTTATCATTAATATATCACTCTAGAGTTG
JMSF034I18-           AATAATGTAAAAGTTGGAATGTTTGTGTCTTTTTATCATTAATATATCACTCTAGAGTTG
                      ____________________________________________________________
consensus             AATAATGTAAAAGTTGGAATGTTTGTGTCTTTTTATCATTAATATATCACTCTAGAGTTG
 
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rJMSF034I18+          TGT                                                         
JMSF034I18-           TGTTCCCTTCTTATATTTTCTATGGAATAAACTTTGTGTTTTCTCTTGACAAAAAAAAAA
                      ____________________________________________________________
consensus             TGTTCCCTTCTTATATTTTCTATGGAATAAACTTTGTGTTTTCTCTTGACAAAAAAAAAA