Contig 000825:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF036P06Sequence387000825 (3)emb|CDP07208.1|2e-60unnamed protein product [Coffea canephora]723008540 (3)ref|XP_008374098.1|1e-113PREDICTED: ABC transporter E family member 2-like isoform X1 [Malus domestica]
JMSF025D01Sequence652000825 (3)emb|CDP07208.1|4e-140unnamed protein product [Coffea canephora]721008540 (3)ref|XP_008374098.1|7e-98PREDICTED: ABC transporter E family member 2-like isoform X1 [Malus domestica]
JMSF031H13Sequence653000825 (3)emb|CDP07208.1|6e-126unnamed protein product [Coffea canephora]746008540 (3)ref|XP_008374098.1|7e-110PREDICTED: ABC transporter E family member 2-like isoform X1 [Malus domestica]

Alignment

This contig is upended


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JMSF025D01+                                                                      T
                      ____________________________________________________________
consensus                                                                        T
 
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JMSF025D01+           CAAGATCGAGACAAAGTTCTGCTTTGACATCTCTCTCATCCTTTTGATCAAGGACTTGAC
                      ____________________________________________________________
consensus             CAAGATCGAGACAAAGTTCTGCTTTGACATCTCTCTCATCCTTTTGATCAAGGACTTGAC
 
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JMSF025D01+           CCACATTTCCTTGGACAGCTTTTGGAATATGGTCAACATATTGAGGTTTGATAATAGCCT
JMSF031H13+                   CCTTGGACAGCTTTTGGAATATGGTCAACATATTGAGGTTTGATAATAGCCT
                      ____________________________________________________________
consensus             CCACATTTCCTTGGACAGCTTTTGGAATATGGTCAACATATTGAGGTTTGATAATAGCCT
 
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JMSF025D01+           TTAGATTGTCTTCCAAAATACGAGTGAAGTAATTCTGTAATTCAGAACCTCGGAAGTAAG
JMSF031H13+           TTAGATTGTCTTCCAAAATACGAGTGAAGTAATTCTGTAATTCAGAACCTCGGAAGTAAG
                      ____________________________________________________________
consensus             TTAGATTGTCTTCCAAAATACGAGTGAAGTAATTCTGTAATTCAGAACCTCGGAAGTAAG
 
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JMSF025D01+           TCAATATCTCCTGCCAATCTGGAGGGTTATTGAAGCGCCCTAAATTCGGTTTTAGTTTCC
JMSF031H13+           TCAATATCTCCTGCCAATCTGGAGGGTTATTGAAGCGCCCTAAATTCGGTTTTAGTTTCC
                      ____________________________________________________________
consensus             TCAATATCTCCTGCCAATCTGGAGGGTTATTGAAGCGCCCTAAATTCGGTTTTAGTTTCC
 
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JMSF025D01+           CAGCCAAAACTTTAAGCGCAGTTGATTTGCCAATACCATTTGTTCCAACCAAGCCAAGAA
JMSF031H13+           CAGCCAAAACTTTAAGCGCAGTTGATTTGCCAATACCATTTGTTCCAACCAAGCCAAGAA
                      ____________________________________________________________
consensus             CAGCCAAAACTTTAAGCGCAGTTGATTTGCCAATACCATTTGTTCCAACCAAGCCAAGAA
 
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JMSF025D01+           CTTGTCCGGGTCTTGGAACTGGCAATCTGTGCAATTTGAACGTATTAGGACCATAACGAT
JMFF036P06+                                                       TTAGGACCATAACGAT
JMSF031H13+           CTTGTCCGGGTCTTGGAACTGGCAATCTGTGCAATTTGAACGTATTAGGACCATAACGAT
                      ____________________________________________________________
consensus             CTTGTCCGGGTCTTGGAACTGGCAATCTGTGCAATTTGAACGTATTAGGACCATAACGAT
 
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JMSF025D01+           GGGTAGTATCCTTGTTCAAGTCCTTTGGCAGATTTATAATCTGAATTGCTTCAAATGGGC
JMFF036P06+           GGGTAGTATCCTTGTTCAAGTCCTTTGGCAGATTTATAATCTGAATTGCTTCAAATGGGC
JMSF031H13+           GGGTAGTATCCTTGTTCAAGTCCTTTGGCAGATTTATAATCTGAATTGCTTCAAATGGGC
                      ____________________________________________________________
consensus             GGGTAGTATCCTTGTTCAAGTCCTTTGGCAGATTTATAATCTGAATTGCTTCAAATGGGC
 
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JMSF025D01+           ATTTCTTAACACAAATACCGCATCCAATGCACAACTCCTCTGAGATGAAAGCAATCTTGG
JMFF036P06+           ATTTCTTAACACAAATACCGCATCCAATGCACAACTCCTCTGAGATGAAAGCAATCTTGG
JMSF031H13+           ATTTCTTAACACAAATACCGCATCCAATACACAACTCCTCTGAGATGAAAGCAATCTTGG
                      ____________________________________________________________
consensus             ATTTCTTAACACAAATACCGCATCCAATGCACAACTCCTCTGAGATGAAAGCAATCTTGG
 
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JMSF025D01+           ATGCAGGAGCAACCTCAATACAAAGTTTGCCGGTTTTTACAACGGGGCAGCTCTTCTTGC
JMFF036P06+           ATGCAGGAGCAACCTCAATACAAAGTTTGCCGGTTTTTACAACGGGGCAGCTCTTCTTGC
JMSF031H13+           ATGCAGGAGCAACCTCAATACAAAGTTTGCCGGTTTTTACAACGGGGCAGCTCTTCTTGC
                      ____________________________________________________________
consensus             ATGCAGGAGCAACCTCAATACAAAGTTTGCCGGTTTTTACAACGGGGCAGCTCTTCTTGC
 
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JMSF025D01+           ATTCCTGACGGCACTTCTTGGGCTTGCACTTGTCGGAGCTGACGATTGCAATACGCGTCA
JMFF036P06+           ATTCCTGACGGCACTTCTTGGGCTTGCACTTGTCGGAGCTGACGATTGCAATACGCGTCA
JMSF031H13+           ATTCCTGACGGCACTTCTTGGGCTTGCACTTGTCGGAGCTGACGATTGCAATACGCGTCA
                      ____________________________________________________________
consensus             ATTCCTGACGGCACTTCTTGGGCTTGCACTTGTCGGAGCTGACGATTGCAATACGCGTCA
 
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JMSF025D01+           ACCTCTGATCCGACATTTTTCTCT                                    
JMFF036P06+           ACCTCTGATCCGACATTTTTCTCT                                    
JMSF031H13+           ACCTCTGATCCGACATTTTTCTCTCCTCCGATCTCCTTGCTTAGAAACCCTAAATTATTT
                      ____________________________________________________________
consensus             ACCTCTGATCCGACATTTTTCTCTCCTCCGATCTCCTTGCTTAGAAACCCTAAATTATTT
 
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JMSF031H13+           GAGCAAAGTGAAGTGTTTTAGCCGTAAAAGGTCCCGTCCCACCAATTGAGGGACGCGTCC
                      ____________________________________________________________
consensus             GAGCAAAGTGAAGTGTTTTAGCCGTAAAAGGTCCCGTCCCACCAATTGAGGGACGCGTCC