| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS046G01 | Sequence | 584 | 000813 (5) | ref|XP_009790867.1| | 9e-45 | PREDICTED: protein transport protein Sec31A-like [Nicotiana sylvestris] | |||||
| JMFS141F09 | Sequence | 621 | 000813 (5) | ref|XP_009790867.1| | 1e-52 | PREDICTED: protein transport protein Sec31A-like [Nicotiana sylvestris] | |||||
| JMSF009H22 | Sequence | 300 | 000813 (5) | ref|XP_009602385.1| | 2e-16 | PREDICTED: protein transport protein Sec31A [Nicotiana tomentosiformis] | 698 | 010001 (4) | ref|XP_011088124.1| | 5e-62 | PREDICTED: protein transport protein SEC31 homolog B [Sesamum indicum] |
| JMSF013N01 | Sequence | 172 | 000813 (5) | 718 | 020332 | gb|KDO83288.1| | 2e-65 | hypothetical protein CISIN_1g0464512mg, partial [Citrus sinensis] | |||
| JMSF030E09 | Sequence | 672 | 000813 (5) | ref|XP_009790867.1| | 2e-56 | PREDICTED: protein transport protein Sec31A-like [Nicotiana sylvestris] | 747 | 010001 (4) | ref|XP_011088124.1| | 2e-68 | PREDICTED: protein transport protein SEC31 homolog B [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
JMSF030E09+ TATCCCATATGC
____________________________________________________________
consensus TATCCCATATGC
. : . : . : . : . : . :
JMFS046G01+ TTTGCTTTCATCAGCACCAGAAGCAAGGAGATTTGAAGTAAATACATT-AACTCCAA
JMSF030E09+ AAATTTGCCTTCATCAGCACCAGAAGCAAGGAGATTTGAAGTAAATACATTAAACTCCAA
____________________________________________________________
consensus AAATTTGCTTTCATCAGCACCAGAAGCAAGGAGATTTGAAGTAAATACATTAAACTCCAA
. : . : . : . : . : . :
JMFS046G01+ TCCACGAACAGGCCCACTATGGTTAGAAAGATGGCCAACAAATGCATTTTCAGAGGCTTC
JMSF030E09+ ACCACGAACAGGCCCACTATGGTTAGAAAGATGGCCAACAAATGCATTTTCAGAGGCTTC
____________________________________________________________
consensus TCCACGAACAGGCCCACTATGGTTAGAAAGATGGCCAACAAATGCATTTTCAGAGGCTTC
. : . : . : . : . : . :
JMFS046G01+ AGGACCTTCTCGACTTTTGCCAGAGGAGATCAAACGCCTGGGATTCCACAGCTCAATGGT
JMSF030E09+ AGGACCTTCTCGACTTTTGCCAGAGGAGATCAAACGCCTGGGATTCCACAGCCCAATGGT
____________________________________________________________
consensus AGGACCTTCTCGACTTTTGCCAGAGGAGATCAAACGCCTGGGATTCCACAGCTCAATGGT
. : . : . : . : . : . :
JMFS046G01+ GCCATCAACAAGACCACCGTCGATGAGGCCGAGATAGAATTCTTCGGAATTGGGCAGAGC
JMSF030E09+ GCCATCAACAAGACCACCGGCGATGAGGCCGAGAGAGAATTCTTCGGAATTGGGCAGAGC
____________________________________________________________
consensus GCCATCAACAAGACCACCGTCGATGAGGCCGAGATAGAATTCTTCGGAATTGGGCAGAGC
. : . : . : . : . : . :
JMFS046G01+ CTTCCCCCATGACAAGCGGTTGAACCGCTCGGAGCTTGCCACCGAGCCGGCCAAGATGAG
JMFS141F09+ AACCGCTCGGAGCTTGCCACCGAGCCGGCCAAGATGAG
JMSF009H22+ GCTCGGAGCTTGCCACCGAGCCGGCCAAGATGAG
JMSF030E09+ CTTCCCCCATGACAAGCGGTTGAACCGCTCGGAGCTTGCCACCGAGCCGGCCAAGATGAG
____________________________________________________________
consensus CTTCCCCCATGACAAGCGGTTGAACCGCTCGGAGCTTGCCACCGAGCCGGCCAAGATGAG
. : . : . : . : . : . :
JMFS046G01+ CTCCCGATCATCTGATGTGAAGTCGAGCTCGAAGATGTCGAGATTGGCCGTGGAACTGAA
JMFS141F09+ CTCCCGATCATCTGATGTGAAGTCGAGCTCGAAGATGTCGAGATTGGCCGTGGAACTGAA
JMSF009H22+ CTCCCGATCATCTGATGTGAAGTCGAGCTCGAAGATGTCGAGATTGGCCGTGGAACTGAA
JMSF030E09+ CTCCCGATCATCTGATGTGAAGTCGAGCTCGAAGATGTCGAGATTGGCCGTGGAACTGAA
____________________________________________________________
consensus CTCCCGATCATCTGATGTGAAGTCGAGCTCGAAGATGTCGAGATTGGCCGTGGAACTGAA
. : . : . : . : . : . :
JMFS046G01+ TGACAGATCGACCGCACCCGCCATGGTCCCGGCCGCTAGGTACGGCGCGTCGGGCGCGAA
JMFS141F09+ TGACAGATCGACCGCACCCGCCATGGTCCCGGCCGCGAGGTACGGCGCGTCGGGCGCGAA
JMSF009H22+ TGACAGATCGACCGCACCCGCCATGGTCCCGGCCGCGAGGTACGGCGCGTCGGGCGCGAA
JMSF030E09+ TGACAGATCGACCGCACCCGCCATGGTCCCGGCCGCGAGGTACGGCGCGTCGGGCGCGAA
____________________________________________________________
consensus TGACAGATCGACCGCACCCGCCATGGTCCCGGCCGCGAGGTACGGCGCGTCGGGCGCGAA
. : . : . : . : . : . :
JMFS046G01+ CGCCGCTGACGCCGATCTGTTCTCCGCCTTCACAATCGCCATGGCTCACCGATCAATCCA
JMFS141F09+ CGCCGCCGACGCCGATCTGTTCACCGCCTTCACAATCGCCATGGCTCACCGATCAATCCA
JMSF009H22+ CGCCGCCGACGCCGATCTGTTCACCGCCTTCACAATCGCCATGGCTCACCGATCAATCCA
JMSF030E09+ CGCCGCCGACGCCGATCTGTTCACCGCCTTCACAATCGCCATGGCTCACCGATCAATCCA
____________________________________________________________
consensus CGCCGCCGACGCCGATCTGTTCACCGCCTTCACAATCGCCATGGCTCACCGATCAATCCA
. : . : . : . : . : . :
JMFS046G01+ ACATCGAAGGTGTCATCCCTTGTGTTTGTAGAGATTGCGAAATGGATATAGGGTTGGGTT
JMFS141F09+ ACAACGAAGGCGTCCTCCCTTGTGTTTGTAGAGATTGCGAAATGGATCTAGGGTTGGGTT
JMSF009H22+ ACAACGAAGGCGTCCTCCCTTGTGTTTGTAGAGATTGCGAAATGGATCTAGGGTTGGGTT
JMSF013N01+ GGCGTCCTCCCTTGTGTTTGTAGAGATTGCGAAATGGATCTAGGGTTGGGTT
JMSF030E09+ ACAACGAAGGCGTCCTCCCTTGTGTTTGTAGAGATTGCGAAATGGATCTAGGGTTGGGTT
____________________________________________________________
consensus ACAACGAAGGCGTCCTCCCTTGTGTTTGTAGAGATTGCGAAATGGATCTAGGGTTGGGTT
. : . : . : . : . : . :
JMFS046G01+ TGAGAAATGGGGGAGAATTCACAGTGCGGGACAACAGATCGAGAGC
JMFS141F09+ TGAGAATTGGGGGAGAATTCACAGTGCGGGACAACAGATCGAGAGCGTGTGTTATTGAAT
JMSF009H22+ TGAGAATTGGGGGAGAATTCACAG
JMSF013N01+ TGAGAATTGGGGGAGAATTCACAGTGCGGGACAACAGATCGAGAGCGTGTGTTATTGAAT
JMSF030E09+ TGAGAATTGGGGGAGAATTCACAGTGCGGGACAACAGATCGAGAGCGTGTGTTATTGAAT
____________________________________________________________
consensus TGAGAATTGGGGGAGAATTCACAGTGCGGGACAACAGATCGAGAGCGTGTGTTATTGAAT
. : . : . : . : . : . :
JMFS141F09+ TGTTTGGTTACGAATCGGAACTTTTTTAGTGTTCATTCAT
JMSF013N01+ TGTTTGGTTACGAATCGGAACTTTTTTAGTGNTCATTCATTCTTTCCTTCTGTTACTTCC
JMSF030E09+ TGTTTGGTTACGAATCGGAACTTTTTTAGTGTTCATTCATTCTTTCCTTCTGTTACTTCC
____________________________________________________________
consensus TGTTTGGTTACGAATCGGAACTTTTTTAGTGTTCATTCATTCTTTCCTTCTGTTACTTCC