Contig 000810:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008H10Sequence596000810 (4)ref|XP_009804329.1|7e-69PREDICTED: low affinity sulfate transporter 3-like [Nicotiana sylvestris]600008157 (3)ref|XP_009593440.1|3e-63PREDICTED: low affinity sulfate transporter 3-like [Nicotiana tomentosiformis]
JMFF048P14Sequence485000810 (4)ref|XP_009804329.1|1e-54PREDICTED: low affinity sulfate transporter 3-like [Nicotiana sylvestris]
JMSF029P07Sequence680000810 (4)ref|XP_009804329.1|9e-73PREDICTED: low affinity sulfate transporter 3-like [Nicotiana sylvestris]741008157 (3)ref|XP_009593440.1|3e-95PREDICTED: low affinity sulfate transporter 3-like [Nicotiana tomentosiformis]
JMSF047H19Sequence717000810 (4)ref|XP_009804329.1|2e-87PREDICTED: low affinity sulfate transporter 3-like [Nicotiana sylvestris]691008157 (3)ref|XP_009593440.1|2e-80PREDICTED: low affinity sulfate transporter 3-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF047H19+            GAAATGCTCAATTCCCAGCAGCCCTTTTAGCTGCTGGAGACCGATAACGATAGCTGCAC
                      ____________________________________________________________
consensus              GAAATGCTCAATTCCCAGCAGCCCTTTTAGCTGCTGGAGACCGATAACGATAGCTGCAC
 
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JMSF047H19+           CCGCCATGAATCCAACTATGGCAGCGTGCGAGAGAAAATCCACGAGAAACCCCAACCTGA
JMSF029P07+                                                   CACGAGAAACCCCAACCTGA
                      ____________________________________________________________
consensus             CCGCCATGAATCCAACTATGGCAGCGTGCGAGAGAAAATCCACGAGAAACCCCAACCTGA
 
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JMFF008H10+            CAGTCCAAACACTGCCTGGAAAGTACCCGCGAAGAAGGTGACAGTGAAAACAATGTTTC
JMSF047H19+           ACAGTCCAAACACTGCCTGGAAAGTACCCGCGAAGAAGGTGACAGTGAAAACAATGTTTC
JMSF029P07+           ACAGTCCAAACACTGCCCGGAAAGTACCCGCGAAGAAGGTGACAGTGAAAACAATGTTTC
                      ____________________________________________________________
consensus             ACAGTCCAAACACTGCCTGGAAAGTACCCGCGAAGAAGGTGACAGTGAAAACAATGTTTC
 
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JMFF008H10+           TGTAACCAATAGCATCCTTAGCAGGATCCACGATTTTCGAAACCATTGCAGAGACCAGCA
JMSF047H19+           TGTAACCAATAGCATCCTTAGCAGGATCCACGATTTTCGAAACCATTGCAGAGACCAGCA
JMFF048P14+                                                                  CAGCA
JMSF029P07+           TGTAACCAATAGCATCCTTAGCAGGATCCACGATTTTCGAAACCATTGCAGAGACCAGCA
                      ____________________________________________________________
consensus             TGTAACCAATAGCATCCTTAGCAGGATCCACGATTTTCGAAACCATTGCAGAGACCAGCA
 
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JMFF008H10+           TAGAGACAACTGCAACCGGACCGACTGCTAGCTCCCGCGAACTCCCCATCACAGCGTATA
JMSF047H19+           TAGAGACAACTGCAACCGGACCGACTGCTAGCTCCCGCGAACTCCCCATCACAGCGTATA
JMFF048P14+           TAGAGACAACTGCAACCGGACCGACTGCTAGCTCCCGCGAACTCCCCATCACAGCGTATA
JMSF029P07+           TAGAGACAACTGCAACCGGACCGACTGCTAGCTCCCGCGAACTCCCCATCACAGCGTATA
                      ____________________________________________________________
consensus             TAGAGACAACTGCAACCGGACCGACTGCTAGCTCCCGCGAACTCCCCATCACAGCGTATA
 
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JMFF008H10+           TCAAAGGCGGAACAACACTCGTGTATAAGCCATACTGAGGATCCAGTTTTGCTAGATTAG
JMSF047H19+           TCAAAGGCGGAACAACACTCGTGTATAAGCCATACTGAGGATCCAGTTTTGCTAGATTAG
JMFF048P14+           TCAAAGGCGGAACAACACTCGTGTATAAGCCATACTGAGGATCCAGTTNTGCTAGATTAG
JMSF029P07+           TCAAAGGCGGAACAACACTCGTGTATAAGCCATACTGAGGATCCAGTTTTGCTAGATTAG
                      ____________________________________________________________
consensus             TCAAAGGCGGAACAACACTCGTGTATAAGCCATACTGAGGATCCAGTTTTGCTAGATTAG
 
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JMFF008H10+           CATATCCAATACTCTGTGGAATACAAAGACTGGCAAGAGTTAGGCCTGCCATCAAGTCTT
JMSF047H19+           CATATCCAATACTCTGTGGAATACAAAGACTGGCAAGAGTTAGGCCTGCCATCAAGTCTT
JMFF048P14+           CATATCCAATACTCTGTGGAATACAAAGACTGGCAAGAGTTAGGCCTGCCATCAAGTCTT
JMSF029P07+           CATATCCAATACTCTGTGGAATACAAAGACTGGCAAGAGTTAGGCCTGCCATCAAGTCTT
                      ____________________________________________________________
consensus             CATATCCAATACTCTGTGGAATACAAAGACTGGCAAGAGTTAGGCCTGCCATCAAGTCTT
 
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JMFF008H10+           TCTTGAACATAGCTGCTCTGTAAGTTCTCCCCCATTTCAAGATCGGAAAAAGGGCTTGCA
JMSF047H19+           TCTTGAACATAGCTGCTCTGTAAGTTCTCCCCCATTTCAAGATCGGAAAAAGGGCTTGCA
JMFF048P14+           TCTTGAACATAGCTGCTCTGTAAGTTCTCCCCCATTTCAAGATCGGAAAAAGGGCTTGCA
JMSF029P07+           TCTTGAACATAGCTGCTCTGTAAGTTCTCCCCCATTTCAAGATCGGAAAAAGGGCTTGCA
                      ____________________________________________________________
consensus             TCTTGAACATAGCTGCTCTGTAAGTTCTCCCCCATTTCAAGATCGGAAAAAGGGCTTGCA
 
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JMFF008H10+           GGAAAGAAACAGCAAATCCGTTTGAATTTCTGTTCTTGGATGAAGCTGATGAGGAAGTTT
JMSF047H19+           GGAAAGAAACAGCAAATCCGTTTGAATTTCTGTTCTTGGATGAAGCTGATGAGGAAGTTT
JMFF048P14+           GGAAAGAAACAGCAAATCCGTTTGAATTTCTGTTCTTGGATGAAGCTGATGAGGAAGTTT
JMSF029P07+           GGAAAGAAACAGCAAATCCGTTTGAATTTCTGTTCTTGGATGAAGCTGATGAGGAAGTTT
                      ____________________________________________________________
consensus             GGAAAGAAACAGCAAATCCGTTTGAATTTCTGTTCTTGGATGAAGCTGATGAGGAAGTTT
 
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JMFF008H10+           TGGGTCTCAGAGAGCTACAGAGTTGTTGCCATGGGCTTGGTGGGTCAGGAGAGTCCAGAA
JMSF047H19+           TGGGTCTCAGAGAGCTACAGAGTTGTTGCCATGGGCTTGGTGGGTCAGGAGAGTCCAGAA
JMFF048P14+           TGGGTCTCAGAGAGCTACAGAGTTGTTGCCATGGGCTTGGTGGGTCAGGAGAGTCCAGAA
JMSF029P07+           TGGGTCTCAGAGAGCTACAGAGTTGTTGCCATGGGCTTGGTGGGTCAGGAGAGTCCAGAA
                      ____________________________________________________________
consensus             TGGGTCTCAGAGAGCTACAGAGTTGTTGCCATGGGCTTGGTGGGTCAGGAGAGTCCAGAA
 
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JMFF008H10+           GCCAATTAGCCCTCTCAACTTTTCTGACATTATTATCGTTTTCAGGTTCCAGCTGCCGGA
JMSF047H19+           GCCAATTAGCCCTCTCAACTTTTCTGACATTATTATCGTTTTCAGGTTCCAGCTGCCGGA
JMFF048P14+           GCCAATTAGCCCTCTCAACTTTTCTGACATTATTATCGTTTTCAGGTTCCAGCTGCCGGA
JMSF029P07+           GCCAATTAGCCCTCTCAACTTTTCTGACATTATTATCGTTTTCAGGTTCCAGCTGCCGGA
                      ____________________________________________________________
consensus             GCCAATTAGCCCTCTCAACTTTTCTGACATTATTATCGTTTTCAGGTTCCAGCTGCCGGA
 
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JMFF008H10+           GCTCAACGCTGAAGCTCTCATTATTAGGCACTGAACCCATTGCTATTATGGA        
JMSF047H19+           GCTCAACGCTGAAGCTCTCATTATTAGGCACTGAACCCATTGCTATTATGGA        
JMFF048P14+           GCTCAACGCTGAAGCTCTCATTATTAGGCACTGAACCCATTGCTATTATGGA        
JMSF029P07+           GCTCAACGCTGAAGCTCTCATTATTAGGCACTGAACCCATTGCTATTATGGATAGGCACT
                      ____________________________________________________________
consensus             GCTCAACGCTGAAGCTCTCATTATTAGGCACTGAACCCATTGCTATTATGGATAGGCACT
 
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JMSF029P07+           GGAGATCAATAATCTTTCTTCCAATTTATTGTGATGGGCTTCCTAAAACAGTACTCCGTC
                      ____________________________________________________________
consensus             GGAGATCAATAATCTTTCTTCCAATTTATTGTGATGGGCTTCCTAAAACAGTACTCCGTC