clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF042C18 | Sequence | 636 | 000803 (9) | ref|XP_011098336.1| | 291 | PREDICTED: uncharacterized protein LOC105177020 [Sesamum indicum] | 520 | 000803 (9) | ref|XP_011098336.1| | 80.1 | PREDICTED: uncharacterized protein LOC105177020 [Sesamum indicum] |
JMFF042N23 | Sequence | 654 | 000803 (9) | ref|XP_009762240.1| | 297 | PREDICTED: uncharacterized protein LOC104214286 [Nicotiana sylvestris] | |||||
JMFF044F18 | Sequence | 645 | 000803 (9) | ref|XP_009762240.1| | 291 | PREDICTED: uncharacterized protein LOC104214286 [Nicotiana sylvestris] | 604 | 000803 (9) | ref|XP_009762240.1| | 152 | PREDICTED: uncharacterized protein LOC104214286 [Nicotiana sylvestris] |
JMFN003J16 | Sequence | 612 | 000803 (9) | ref|XP_009762240.1| | 192 | PREDICTED: uncharacterized protein LOC104214286 [Nicotiana sylvestris] | |||||
JMFN004P03 | Sequence | 535 | 000803 (9) | ref|XP_009762240.1| | 114 | PREDICTED: uncharacterized protein LOC104214286 [Nicotiana sylvestris] | |||||
JMSF029D19 | Sequence | 683 | 000803 (9) | ref|XP_009762240.1| | 303 | PREDICTED: uncharacterized protein LOC104214286 [Nicotiana sylvestris] | 757 | 000803 (9) | ref|XP_009762240.1| | 272 | PREDICTED: uncharacterized protein LOC104214286 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMFF042C18- CTGGAG
____________________________________________________________
consensus CTGGAG
. : . : . : . : . : . :
rJMFF042C18- AGTTTTTTTTTTTTTTTCXXXXXXXXXXXXXXXXXXXXXXXAGTTTTTTTTTAGTCCCAA
____________________________________________________________
consensus AGTTTTTTTTTTTTTTTCNNNNNNNNNNNNNNNNNNNNNNNAGTTTTTTTTTAGTCCCAA
. : . : . : . : . : . :
rJMFF042C18- TTTGTATCATATAATACTTGGCATATATTGTCCCAAAGAAGCATAAATAACAGACTTGTA
JMFN004P03+ TTGTATCATATAATACTTGGCATATATTGTCCCAAAGAAGCATAAATAACAGACTTGTA
rJMFF044F18- TTTGTATCATATAATACTTGGCATATATTGTCCCAAAGAAGCATAAATAACAGACTTGTA
JMFN003J16+ AGCATAAATAACAGACTTGTA
rJMSF029D19- AAGAAGCATAAATAACAGACTTGTA
____________________________________________________________
consensus TTTGTATCATATAATACTTGGCATATATTGTCCCAAAGAAGCATAAATAACAGACTTGTA
. : . : . : . : . : . :
rJMFF042C18- TTACATAATATAAATATAAATATAAATATACAATGAGCATAACATACTAGGAAAGTTCAA
JMFN004P03+ TTACATAATATAAATATAAATATAAATATACAATGAGCATAACATACTAGGAAAGTTCAA
rJMFF044F18- TTACATAATATAAATATAAATATAAATATACAATGAGCATAACATACTAGGAAAGTTCAA
JMFN003J16+ TTACATAATATAAATATAAATATAAATATNCAATGAGCATAACATACTAGGAAAGTTCAA
rJMSF029D19- TTACATAATATAAATATAAATATAAATATACAATGAGCATAACATACTAGGAAAGTTCAA
____________________________________________________________
consensus TTACATAATATAAATATAAATATAAATATACAATGAGCATAACATACTAGGAAAGTTCAA
. : . : . : . : . : . :
rJMFF042C18- GTTTTGGCACAAAAGAATCAAAGACTGAAACAGCATCATGACAACAGCAAATTCTCAATC
JMFN004P03+ GTTTTGGCACAAAAGAATCAAAGACTGAAACAGCATCATGACAACAGCAAATTCTCAATC
rJMFF044F18- GTTTTGGCACAAAAGAATCAAAGACTGAAACAGCATCATGACAACAGCAAATTCTCAATC
JMFN003J16+ GTTTTGGCACAAAAGAATCAAAGACTGAAACAGCATCATGACAACAGCAAATTCTCAATC
rJMSF029D19- GTTTTGGCACAAAAGAATCAAAGACTGAAACAGCATCATGACAACAGCAAATTCTCAATC
____________________________________________________________
consensus GTTTTGGCACAAAAGAATCAAAGACTGAAACAGCATCATGACAACAGCAAATTCTCAATC
. : . : . : . : . : . :
rJMFF042C18- TCCAACTAAAACTAGACTCCTATACTTGGAATTCAGATGCAACTAAGGGTCTCGAAAGTG
JMFN004P03+ TCCAACTAAAACTAGACTCCTATACTTGGAATTCAGATGCAACTAAGGGTCTCGAAAGTG
rJMFF044F18- TCCAACTAAAACTAGACTCCTATACTTGGAATTCAGATGCAACTAAGGGTCTCGAAAGTG
JMFN003J16+ TCCAACTAAAACTAGACTCCTATACTTGGAATTCAGATGCAACTAAGGGTCTCGAAAGTG
rJMSF029D19- TCCAACTAAAACTAGACTCCTATACTTGGAATTCAGATGCAACTAAGGGTCTCGAAAGTG
____________________________________________________________
consensus TCCAACTAAAACTAGACTCCTATACTTGGAATTCAGATGCAACTAAGGGTCTCGAAAGTG
. : . : . : . : . : . :
rJMFF042C18- AAAATTCAGGCATTCACAGCAATCTCGTCGAGGAAATTATAAGCTGACCTCATTTATATG
JMFN004P03+ AAAATTCAGGCATTCACAGCAATCTCGTCGAGGAAATTATAAGCTGACCTCATTTATATG
rJMFF044F18- AAAATTCAGGCATTCACAGCAATCTCGTCGAGGAAATTATAAGCTGACCTCATTTATATG
JMFN003J16+ AAAATTCAGGCATTCACAGCAATCTCGTCGAGGAAATTATAAGCTGACCTCATTTATATG
rJMSF029D19- AAAATTCAGGCATTCACAGCAATCTCGTCGAGGAAATTATAAGCTGACCTCATTTATATG
JMSF029D19+ TATAAGCTGACCTCATTTATATG
____________________________________________________________
consensus AAAATTCAGGCATTCACAGCAATCTCGTCGAGGAAATTATAAGCTGACCTCATTTATATG
. : . : . : . : . : . :
rJMFF042C18- CTGACATGCCGATGTCAGCAGCTCCAGTGTATTGCCCCGGGGTACCCCTGGCCTTGGAAT
JMFN004P03+ CTGACATGCCGATGTCAGCAGCTCCAGTGTATTGCCCCGGGGTACCCCTGGCCTTGGAAT
rJMFF044F18- CTGACATGCCGATGTCAGCAGCTCCAGTGTATTGCCCCGGGGTACCCCTGGCCTTGGAAT
JMFN003J16+ CTGACATGCCGATGTCAGCAGCTCCAGTGTATTGCCCCGGGGTACCCCTGGCCTTGGAAT
rJMSF029D19- CTGACATGCCGATGTCAGCAGCTCCNGTGTATTGCCCCGGGGTACCCCTGGCCTTGGAAT
JMFF042N23+ CATGCCGATGTCAGCAGCTCCAGTGTATTGCCCCGGGGTACCCCTGGCCTTGGAAT
JMFF042C18+ AGCTCCAGTGTATTGCNCCGGGGTACCCCTGGCCTTGGAAT
JMFF044F18+ ATGTCAGCAGCTCCAGTGTATTGCCCCGGGGTACCCCTGGCCTTGGAAT
JMSF029D19+ CTGACATGCCGATGTCAGCAGCTCCAGTGTATTGCCCCGGGGTACCCCTGGCCTTGGAAT
____________________________________________________________
consensus CTGACATGCCGATGTCAGCAGCTCCAGTGTATTGCCCCGGGGTACCCCTGGCCTTGGAAT
. : . : . : . : . : . :
rJMFF042C18- AGGAAGCATAATAGAACTCGGAGATTATGCCTGTGAACAAAATGAAAGCTGCTCCAGCTG
JMFN004P03+ AGGAAGCATAATAGAACTCGGAGATTATGCCTGTGAACAAAATGAAAGCTGCTCCAGCTG
rJMFF044F18- AGGAAGCATAATAGAACTCGGAGATTATGCCTGTGAACAAAATGAAAGCTGCTCCAGCTG
JMFN003J16+ AGGAAGCATAATAGAACTCGGAGATTATGCCTGTGAACAAAATGAAAGCTGCTCCAGCTG
rJMSF029D19- AGGAAGCATAATAGAACTCGGAGATTATGCCTGTGAACAAAATGAAAGCTGCTCCAGCTG
JMFF042N23+ AGGAAGCATAATAGAACTCGGAGATTATGCCTGTGAACAAAATGAAAGCTGCTCCAGCTG
JMFF042C18+ AGGAAGCATAATAGAACTCGGAGATTATGCCTGTGAACAAAATGAAAGCTGCTCCAGCTG
JMFF044F18+ AGGAAGCATAATAGAACTCGGAGATTATGCCTGTGAACAAAATGAAAGCTGCTCCAGCTG
JMSF029D19+ AGGAAGCATAATAGAACTCGGAGATTATGCCTGTGAACAAAATGAAAGCTGCTCCAGCTG
____________________________________________________________
consensus AGGAAGCATAATAGAACTCGGAGATTATGCCTGTGAACAAAATGAAAGCTGCTCCAGCTG
. : . : . : . : . : . :
rJMFF042C18- CAAAGACTCCCTTCCTCAATGTTTCACAGGAAAG
JMFN004P03+ CAAAGACTCCCTTCCTCAATGTTTCACAGGAAAGTGGCTTGTCATTCATTAAGAACGATG
rJMFF044F18- CAAAGACTCCCTTCCTCAATGTTTCACAGGAAAGTGGCTTGTCATTCATTAAGAACGATG
JMFN003J16+ CAAAGACTCCCTTCCTCAATGTTTCACAGGAAAGTGGCTTGTCATTCATTAAGAACGATG
rJMSF029D19- CAAAGACTCCCTTCCTCAATGTTTCACAGGAAAGTGGCTTGTCATTCATTAAGAACGATG
JMFF042N23+ CAAAGACTCCCTTCCTCAATGTTTCACAGGAAAGTGGCTTGTCATTCATTAAGAACGATG
JMFF042C18+ CAAAGACTCCCTTCCTCAATGTTTCACAGGAAAGTGGCTTGTCATTCATTAAGAACGATG
JMFF044F18+ CAAAGACTCCCTTCCTCAATGTTTCACAGGAAAGTGGCTTGTCATTCATTAAGAACGATG
JMSF029D19+ CAAAGACTCCCTTCCTCAATGTTTCACAGGAAAGTGGCTTGTCATTCATTAAGAACGATG
____________________________________________________________
consensus CAAAGACTCCCTTCCTCAATGTTTCACAGGAAAGTGGCTTGTCATTCATTAAGAACGATG
. : . : . : . : . : . :
JMFN004P03+ ATCTGTACTTTGTGTGATAAGCATTCCTCACAGAACCAGCCAGCAAG
rJMFF044F18- ATCTGTACTTTGTGTGATAAGCATTCCTCACAGAACCAGCCAGCAAGCATACCTCGGCTA
JMFN003J16+ ATCTGTACTTTGTGTGATAAGCATTCCTCACAGAACCAGCCAGCAAGCATACCTCGGCTA
rJMSF029D19- ATCTGTACTTTGTGTGATAAGCATTCCTCACAGAACCAGCCAGCAAGCATACCTCGGCTA
JMFF042N23+ ATCTGTACTTTGTGTGATAAGCATTCCTCACAGAACCAGCCAGCAAGCATACCTCGGCTA
JMFF042C18+ ATCTGTACTTTGTGTGATAAGCATTCCTCACAGAACCAGCCAGCAAGCATACCTCGGCTA
JMFF044F18+ ATCTGTACTTTGTGTGATAAGCATTCCTCACAGAACCAGCCAGCAAGCATACCTCGGCTA
JMSF029D19+ ATCTGTACTTTGTGTGATAAGCATTCCTCACAGAACCAGCCAGCAAGCATACCTCGGCTA
____________________________________________________________
consensus ATCTGTACTTTGTGTGATAAGCATTCCTCACAGAACCAGCCAGCAAGCATACCTCGGCTA
. : . : . : . : . : . :
rJMFF044F18- TGAAAAATGTGACCCAGCAGATTATAAACAGGAGAACTGCA
JMFN003J16+ TGAAAAATGTGACCCAGCAGATTATAAACAGGAGAACTGCACAAGCTCGAGAGCCTCCAG
rJMSF029D19- TGAAAAATGTGACCCAGCAGATTATAAACAGGAGAACTGCACAAGCTCGAGAGCCTCCAG
JMFF042N23+ TGAAAAATGTGACCCAGCAGATTATAAACAGGAGAACTGCACAAGCTCGAGAGCCTCCAG
JMFF042C18+ TGAAAAATGTGACCCAGCAGATTATAAACAGGAGAACTGCACAAGCTCGAGAGCCTCCAG
JMFF044F18+ TGAAAAATGTGACCCAGCAGATTATAAACAGGAGAACTGCACAAGCTCGAGAGCCTCCAG
JMSF029D19+ TGAAAAATGTGACCCAGCAGATTATAAACAGGAGAACTGCACAAGCTCGAGAGCCTCCAG
____________________________________________________________
consensus TGAAAAATGTGACCCAGCAGATTATAAACAGGAGAACTGCACAAGCTCGAGAGCCTCCAG
. : . : . : . : . : . :
JMFN003J16+ GGCTCAAAGCCCTTCCACAGCAGAAGCAGCGGCTCGCCACCATTATAAGAA
rJMSF029D19- GGCTCAAAGCCCTTCCACAGCAGAAGCAGCGGCTCGCCACCATTATAAGAATTTGGCTAG
JMFF042N23+ GGCTCAAAGCCCTTCCACAGCAGAAGCAGCGGCTCGCCACCATTATAAGAATTTGGCTAG
JMFF042C18+ GGCTCAAAGCCCTTCCACAGCAGAAGCAGCGGCTCGCCACCATTATAAGAATTTGGCTAG
JMFF044F18+ GGCTCAAAGCCCTTCCACAGCAGAAGCAGCGGCTCGCCACCATTATAAGAATTTGGCTAG
JMSF029D19+ GGCTCAAAGCCCTTCCACAGCAGAAGCAGCGGCTCGCCACCATTATAAGAATTTGGCTAG
____________________________________________________________
consensus GGCTCAAAGCCCTTCCACAGCAGAAGCAGCGGCTCGCCACCATTATAAGAATTTGGCTAG
. : . : . : . : . : . :
rJMSF029D19- CCATGAGGAATAAGAAGGCACCGACACCAAAACCAGTTGCAATGTCTGAGTCATAAACAC
JMFF042N23+ CCATGAGGAATAAGAAGGCACCGACACCAAAACCAGTTGCAATGTCTGAGTCATAAACAC
JMFF042C18+ CCATGAGGAATAAGAAGGCACCGACACCAAAACCAGTTGCAATGTCTGAGTCATAAACAC
JMFF044F18+ CCATGAGGAATAAGAAGGCACCGACACCAAAACCAGTTGCAATGTCTGAGTCATAAACAC
JMSF029D19+ CCATGAGGAATAAGAAGGCACCGACACCAAAACCAGTTGCAATGTCTGAGTCATAAACAC
____________________________________________________________
consensus CCATGAGGAATAAGAAGGCACCGACACCAAAACCAGTTGCAATGTCTGAGTCATAAACAC
. : . : . : . : . : . :
rJMSF029D19- AGTAGTTGTAAGTGTCTTCAGTATCCTTTTGAATCTTGGCTGTGCTTCGCCTCTGCTCAG
JMFF042N23+ AGTAGTTGTAAGTGTCTTCAGTATCCTTTTGAATCTTGGCTGTGCTTCGCCTCTGCTCAG
JMFF042C18+ AGTAGTTGTAAGTGTCTTCAGTATCCTTTTGAATCTTGGCTGTGCTTCGCCTCTGCTCAG
JMFF044F18+ AGTAGTTGTAAGTGTCTTCAGTATCCTTTTGAATCTTGGCTGTGCTTCGCCTCTGCTCAG
JMSF029D19+ AGTAGTTGTAAGTGTCTTCAGTATCCTTTTGAATCTTGGCTGTGCTTCGCCTCTGCTCAG
____________________________________________________________
consensus AGTAGTTGTAAGTGTCTTCAGTATCCTTTTGAATCTTGGCTGTGCTTCGCCTCTGCTCAG
. : . : . : . : . : . :
rJMSF029D19- CGGCTATAGC
JMFF042N23+ CAGCTATAGCCAAACCAAAAGCTATGAGATCAAACACAAAGACAATGATCATTAACAGCT
JMFF042C18+ CAGCTATAGCCAAACCAAAAGCTATGAGATCAAACACAAAGACAATGATCATTAACAGCT
JMFF044F18+ CAGCTATAGCCAAACCAAAAGCTATGAGATCAAACACAAAGACAATGATCATTAACAGCT
JMSF029D19+ CGGCTATAGCCAAACCAAAAGCTATGAGATCAAACACAAAGACAATGATCATTAACAGCT
____________________________________________________________
consensus CGGCTATAGCCAAACCAAAAGCTATGAGATCAAACACAAAGACAATGATCATTAACAGCT
. : . : . : . : . : . :
JMFF042N23+ TGGAAGCCATTTTTGGAGCGTAGTGAAGCTTCTGCCTTCAGTTGAAGTTCAGAGTTGCAC
JMFF042C18+ TGGAAGCCATTTTTGGAGCGTAGTGAAGCTTCTGCCTTCAGTTGAAGTTCAGAGTTGCAC
JMFF044F18+ TGGAAGCCATTTTTGGAGCGTAGTGAAGCTTCTGCCTTCAGTTGAAGTTCAGAGTTGCAC
JMSF029D19+ TGGAAGCCATTTTTGGAGCGTAGTGAAGCTTCTGCCTTCAGTTGAAGTTCAGAGTTGCAC
____________________________________________________________
consensus TGGAAGCCATTTTTGGAGCGTAGTGAAGCTTCTGCCTTCAGTTGAAGTTCAGAGTTGCAC
. : . : . : . : . : . :
JMFF042N23+ AGATCTAGATCTCTTCCTTCACTGAAATTCTGAAACTCTTAACTCTCTCTCCCCT
JMFF042C18+ AGATCTAGATCTCTTCCTTCACTGAAACTCTGAAACTCTTAACTCTCTCTCCCCT
JMFF044F18+ AGATCTAGATCTCTTCCTTCACTGAAACTCTGAAACTCTTAACTCTCTCTCCCCT
JMSF029D19+ AGATCTAGATCTCTTCCTTCACTGAAACTCTGAAACTCTTAACTCTCTCTCCCCTGTCCC
____________________________________________________________
consensus AGATCTAGATCTCTTCCTTCACTGAAACTCTGAAACTCTTAACTCTCTCTCCCCTGTCCC