Contig 000782:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025D21Sequence565000782 (5)ref|XP_011024933.1|5e-75PREDICTED: asparagine synthetase [glutamine-hydrolyzing] 1 isoform X1 [Populus 773013830 (4)ref|XP_009766230.1|9e-98PREDICTED: asparagine synthetase [glutamine-hydrolyzing] [Nicotiana sylvestris]
JMFF046K08Sequence546000782 (5)gb|KDO66936.1|3e-114hypothetical protein CISIN_1g007799mg [Citrus sinensis]557013830 (4)ref|XP_009616367.1|6e-34PREDICTED: asparagine synthetase [glutamine-hydrolyzing]-like [Nicotiana toment
JMSF027E02Sequence660000782 (5)ref|XP_011024933.1|2e-98PREDICTED: asparagine synthetase [glutamine-hydrolyzing] 1 isoform X1 [Populus 729013830 (4)ref|XP_009766230.1|2e-92PREDICTED: asparagine synthetase [glutamine-hydrolyzing] [Nicotiana sylvestris]
JMSF031B19Sequence673000782 (5)ref|XP_011024933.1|9e-103PREDICTED: asparagine synthetase [glutamine-hydrolyzing] 1 isoform X1 [Populus
JMSF046L02Sequence696000782 (5)ref|XP_011024933.1|2e-106PREDICTED: asparagine synthetase [glutamine-hydrolyzing] 1 isoform X1 [Populus 820013830 (4)ref|XP_009766230.1|8e-113PREDICTED: asparagine synthetase [glutamine-hydrolyzing] [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF046K08+                                                                GTCCTGG
                      ____________________________________________________________
consensus                                                                  GTCCTGG
 
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JMFF046K08+           CGGAAACGCCACAAACTGCTCACAATCGTCGTGTAAGCCCTTCAGTTCAGAGGACACCCA
JMSF031B19+                                                   TTCAGTTCAGAGGACACCCA
JMSF046L02+                                   ATCGTCGTGTAAGCCCTTCAGTTCAGAGGACACCCA
                      ____________________________________________________________
consensus             CGGAAACGCCACAAACTGCTCACAATCGTCGTGTAAGCCCTTCAGTTCAGAGGACACCCA
 
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JMFF046K08+           AACAGAACCATCAAGCCCCCAGCCAATATAAAGGGAAGTAATTCCAATAGCATCACGAGC
JMSF031B19+           AACAGAACCATCAAGCCCCCAGCCAATATAAAGGGAAGTAATTCCAATAGCATCACGAGC
JMSF046L02+           AACAGAACCATCAAGCCCCCAGCCAATATAAAGGGAAGTAATTCCAATAGCATCACGAGC
JMSF027E02+           AACAGAACCATCAAGCCCCCAGCCAATATAAAGGGAAGTAATTCCAATAGCATCACGAGC
                      ____________________________________________________________
consensus             AACAGAACCATCAAGCCCCCAGCCAATATAAAGGGAAGTAATTCCAATAGCATCACGAGC
 
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JMFF046K08+           AACTAGGAAACTGTTGTCACGGGTGTCCAGTAAAACGAAAGAAAACATCCCATCCAGCAT
JMSF031B19+           AACTAGGAAACTGTTGTCACGGGTGTCCAGTAAAACGAAAGAAAACATCCCATCCAGCAT
JMSF046L02+           AACTAGGAAACTGTTGTCACGGGTGTCCAGTAAAACGAAAGAAAACATCCCATCCAGCAT
JMFF025D21+                                             ACGAAAGAAAACATCCCATCCAGCAT
JMSF027E02+           AACTAGGAAACTGTTGTCACGGGTGTCCAGTAAAACGAAAGAAAACATCCCATCCAGCAT
                      ____________________________________________________________
consensus             AACTAGGAAACTGTTGTCACGGGTGTCCAGTAAAACGAAAGAAAACATCCCATCCAGCAT
 
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JMFF046K08+           GTCCACGAAGTTCTCTCCATGTTCTTCATAAAGATGCGCAATGACATCACAGTCGCTACC
JMSF031B19+           GTCCACGAAGTTCTCTCCATGTTCTTCATAAAGATGCGCAATGACATCACAGTCGCTACC
JMSF046L02+           GTCCACGAAGTTCTCTCCATGTTCTTCATAAAGATGCGCAATGACATCACAGTCGCTACC
JMFF025D21+           GTCCACGAAGTTCTCTCCATGTTCTTCATAAAGATGCGCAATGACATCACAGTCGCTACC
JMSF027E02+           GTCCACGAAGTTCTCTCCATGTTCTTCATAAAGATGCGCAATGACATCACAGTCGCTACC
                      ____________________________________________________________
consensus             GTCCACGAAGTTCTCTCCATGTTCTTCATAAAGATGCGCAATGACATCACAGTCGCTACC
 
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JMFF046K08+           GGTATAAAACTTGTGGTTCGGCAAACTCTTCCTCAGCTCCTCATGGTTATAGATTTCTCC
JMSF031B19+           GGTATAAAACTTGTGGTTCGGCAAACTCTTCCTCAGCTCCTCATGGTTATAGATTTCTCC
JMSF046L02+           GGTATAAAACTTGTGGTTCGGCAAACTCTTCCTCAGCTCCTCATGGTTATAGATTTCTCC
JMFF025D21+           GGTATAAAACTTGTGGTTCGGCAAACTCTTCCTCAGCTCCTCATGGTTATAGATTTCTCC
JMSF027E02+           GGTATAAAACTTGTGGTTCGGCAAACTCTTCCTCAGCTCCTCATGGTTATAGATTTCTCC
                      ____________________________________________________________
consensus             GGTATAAAACTTGTGGTTCGGCAAACTCTTCCTCAGCTCCTCATGGTTATAGATTTCTCC
 
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JMFF046K08+           ATTAACCGTCACAACAATCTTCTTATCTTCGTTAAACAGAGGCTGATCGCCGGAGGCGGG
JMSF031B19+           ATTAACCGTCACAACAATCTTCTTATCTTCGTTAAACAGAGGCTGATCGCCGGAGGCGGG
JMSF046L02+           ATTAACCGTCACAACAATCTTCTTATCTTCGTTAAACAGAGGCTGATCGCCGGAGGCGGG
JMFF025D21+           ATTAACCGTCACAACAATCTTCTTATCTTCGTTAAACAGAGGCTGATCGCCGGAGGCGGG
JMSF027E02+           ATTAACCGTCACAACAATCTTCTTATCTTCGTTAAACAGAGGCTGATCGCCGGAGGCGGG
                      ____________________________________________________________
consensus             ATTAACCGTCACAACAATCTTCTTATCTTCGTTAAACAGAGGCTGATCGCCGGAGGCGGG
 
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JMFF046K08+           ATCAATGATCGCCAGCCGCTGGTGCGCCAAGTAAAAATCCCCGTGCTGAAACAACCCACT
JMSF031B19+           ATCAATGATCGCCAGCCGCTGGTGCGCCAAGTAAAAATCCCCGTGCTGAAACAACCCACT
JMSF046L02+           ATCAATGATCGCCAGCCGCTGGTGCGCCAAGTAAAAATCCCCGTGCTGAAACAACCCACT
JMFF025D21+           ATCAATGATCGCCAGCCGCTGGTGCGCCAAGTAAAAATCCCCGTGCTGAAACAACCCACT
JMSF027E02+           ATCAATGATCGCCAGCCGCTGGTGCGCCAAGTAAAAATCCCCGTGCTGAAACAACCCACT
                      ____________________________________________________________
consensus             ATCAATGATCGCCAGCCGCTGGTGCGCCAAGTAAAAATCCCCGTGCTGAAACAACCCACT
 
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JMFF046K08+           CCAATCCGGTCCCCTGTGCTTCAACCTGCGAGAGAGTTCGAGGACGCGAACCCTCTTGCG
JMSF031B19+           CCAATCCGGTCCCCTGTGCTTCAACCTGCGAGAGAGTTCGAGGACGCGAACCCTCTTGCG
JMSF046L02+           CCAATCCGGTCCCCTGTGCTTCAACCTGCGAGAGAGTTCGAGGACGCGAACCCTCTTGCG
JMFF025D21+           CCAATCCGGTCCCCTGTGCTTCAACCTGCGAGAGAGTTCGAGGACGCGAACCCTCTTGCG
JMSF027E02+           CCAATCCGGTCCCCTGTGCTTCAACCTGCGAGAGAGTTCGAGGACGCGAACCCTCTTGCG
                      ____________________________________________________________
consensus             CCAATCCGGTCCCCTGTGCTTCAACCTGCGAGAGAGTTCGAGGACGCGAACCCTCTTGCG
 
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JMFF046K08+           CTGAGAGTCGTCGGAGCAACCCAACACGGCCAAGATTCCGCACATGGTGTCTCGTTTT  
JMSF031B19+           CTGAGAGTCGTCGGAGCAACCCAACACGGCCAAGATTCCGCACATGGTGTCTCGTTTTTG
JMSF046L02+           CTGAGAGTCGTCGGAGCAACCCAACACGGCCAAGATTCCGCACATGGTGTCTCGTTTTTG
JMFF025D21+           CTGAGAGTCGTCGGAGCAACCCAACACGGCCAAGATTCCGCACATGGTGTCTCGTTTTTG
JMSF027E02+           CTGAGAGTCGTCGGAGCAACCCAACACGGCCAAGATTCCGCACATGGTGTCTCGTTTTTG
                      ____________________________________________________________
consensus             CTGAGAGTCGTCGGAGCAACCCAACACGGCCAAGATTCCGCACATGGTGTCTCGTTTTTG
 
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JMSF031B19+           ATGGAAAGAATGAGGAAAATTAAACTGTGTGTGTATATATTGGGAAGAAAGGGGAAGGAA
JMSF046L02+           ATGGAAAGAATGAGGAAAATTAAACTGTGTGTGTATATATTGGGAAGAAAGGGGAAGGAA
JMFF025D21+           ATGGAAAGAATGAGGAAAATTAAACTGTGTGTGTATATATTGGGAAGAAAGGGGAAGGAA
JMSF027E02+           ATGGAAAGAATGAGGAAAATTAAACTGTGTGTGTATATATTGGGAAGAAAGGGGAAGGAA
                      ____________________________________________________________
consensus             ATGGAAAGAATGAGGAAAATTAAACTGTGTGTGTATATATTGGGAAGAAAGGGGAAGGAA
 
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JMSF031B19+           GAGATGGAAGAGAGAGAGTTAAGGGAGGGAACAGAGAGAAATGCACAAATTTGGGAGATG
JMSF046L02+           GAGATGGAAGAGAGAGAGTTAAGGGAGGGAACAGAGAGAAATGCACAAATTTGGGAGATG
JMFF025D21+           GAGATGGAAGAGAGAGAGTTAAGGGAGGGAACAGAGAGAAATGCACAAATTTGGGAGATG
JMSF027E02+           GAGATGGAAGAGAGAGAGTTAAGGGAGGGAACAGAGAGAAATGCACAAATTTGGGAGATG
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consensus             GAGATGGAAGAGAGAGAGTTAAGGGAGGGAACAGAGAGAAATGCACAAATTTGGGAGATG
 
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JMSF031B19+           AAAGCACGTAGACAGAGTTCACAGGTGGTCGTGTTCTGTTCTGCTTCGCTC         
JMSF046L02+           AAAGCACGTAGACAGAGTTCACAGGTGGTCGTGTTCTGTTCTGCTTCGCTC         
JMFF025D21+           AAAGCACGTAGACAGAGTTCACAGGTGGTCGTGTTCTGTTCTGCTTCGCTC         
JMSF027E02+           AAAGCACGTAGACAGAGTTCACAGGTGGTCGTGTTCTGTTCTGCTTCGCTCTGGGAGGTC
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consensus             AAAGCACGTAGACAGAGTTCACAGGTGGTCGTGTTCTGTTCTGCTTCGCTCTGGGAGGTC