Contig 000779:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004N03Sequence506000779 (5)gb|KGN59867.1|1e-91hypothetical protein Csa_3G851190 [Cucumis sativus]734002641 (5)ref|XP_006360121.1|2e-85PREDICTED: ubiquitin carboxyl-terminal hydrolase 14-like [Solanum tuberosum]
JMFF016K11Sequence509000779 (5)gb|KGN59867.1|7e-91hypothetical protein Csa_3G851190 [Cucumis sativus]738002641 (5)ref|XP_006360121.1|9e-88PREDICTED: ubiquitin carboxyl-terminal hydrolase 14-like [Solanum tuberosum]
JMFF021J06Sequence542000779 (5)gb|KGN59867.1|4e-97hypothetical protein Csa_3G851190 [Cucumis sativus]699002641 (5)ref|XP_006360121.1|7e-64PREDICTED: ubiquitin carboxyl-terminal hydrolase 14-like [Solanum tuberosum]
JMFF036J10Sequence365000779 (5)ref|XP_010468329.1|3e-61PREDICTED: ubiquitin carboxyl-terminal hydrolase 14-like [Camelina sativa]705002641 (5)ref|XP_006360121.1|6e-78PREDICTED: ubiquitin carboxyl-terminal hydrolase 14-like [Solanum tuberosum]
JMSF026M01Sequence641000779 (5)gb|KGN59867.1|2e-123hypothetical protein Csa_3G851190 [Cucumis sativus]709002641 (5)ref|XP_006360121.1|2e-72PREDICTED: ubiquitin carboxyl-terminal hydrolase 14-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF026M01+ TACCACAAAGGATTGTCCCATCAGTTAGATTCAGCCAAAGA
                      ____________________________________________________________
consensus TACCACAAAGGATTGTCCCATCAGTTAGATTCAGCCAAAGA
 
. : . : . : . : . : . :
JMFF021J06+ G
JMSF026M01+ TTTTCAGTCTTATCACATTTGGAACACTTCCACCCTGATGGAGGAACAACAACACCATTG
                      ____________________________________________________________
consensus TTTTCAGTCTTATCACATTTGGAACACTTCCACCCTGATGGAGGAACAACAACACCATTG
 
. : . : . : . : . : . :
JMFF021J06+ TCAAGCTGTACTAGTTCCATGGCATATTTACTGGTCAGTTTCTTATCAGCTGTCCAGGCA
JMFF004N03+ GTCAGTTTCTTATCAGCTGTCCAGGCA
JMFF016K11+ GTCAGTTTNTTATCAGCTGTCCAGGCA
JMSF026M01+ TCAAGCTGTACTAGTTCCATGGCATATTTACTGGTCAGTTTCTTATCAGCTGTCCAGGCA
                      ____________________________________________________________
consensus TCAAGCTGTACTAGTTCCATGGCATATTTACTGGTCAGTTTCTTATCAGCTGTCCAGGCA
 
. : . : . : . : . : . :
JMFF021J06+ GCAACTTGCTCTTTCCTCTCAGCACTCTCAGCCAATAAAATAGCATCAACAGCCAACCTT
JMFF004N03+ GCAACTTGCTCTTTCCTCTCAGCACTCTCAGCCAATAAAATAGCATCAACAGCCAACCTT
JMFF016K11+ GCAACTTGCTCTTTCCTCTCAGCACTCTCAGCCAATAAAATAGCATCAACAGCCAACCTT
JMSF026M01+ GCAACTTGCTCTTTCCTCTCAGCACTCTCAGCCAATAAAATAGCATCAACAGCCAACCTT
                      ____________________________________________________________
consensus GCAACTTGCTCTTTCCTCTCAGCACTCTCAGCCAATAAAATAGCATCAACAGCCAACCTT
 
. : . : . : . : . : . :
JMFF021J06+ ATCTTCTCTGGCAACTCAACTGAAGGAAATGGAAGAGTCAAATAATCTGGCAATAAGACT
JMFF004N03+ ATCTTCTCTGGCAACTCAACTGAAGGAAATGGAAGAGTCAAATAATCTGGCAATAAGACT
JMFF016K11+ ATCTTCTCTGGCAACTCAACTGAAGGAAATGGAAGAGTCAAATAATCTGGCAATAAGACT
JMFF036J10+ AAGACT
JMSF026M01+ ATCTTCTCTGGCAACTCAACTGAAGGAAATGGAAGAGTCAAATAATCTGGCAATAAGACT
                      ____________________________________________________________
consensus ATCTTCTCTGGCAACTCAACTGAAGGAAATGGAAGAGTCAAATAATCTGGCAATAAGACT
 
. : . : . : . : . : . :
JMFF021J06+ ATTTGATAGCTCTCATCATACTCAGGTTCATTGTTATCAAAACCACCTTCAAGACCTATA
JMFF004N03+ ATTTGATAGCTCTCATCATACTCAGGTTCATTGTTATCAAAACCACCTTCAAGACCTATA
JMFF016K11+ ATTTGATAGCTCTCATCATACTCAGGTTCATTGTTATCAAAACCACCTTCAAGACCTATA
JMFF036J10+ ATTTGATAGCTCTCATCATACTCAGGTTCATTGTTATCAAAACCACCTTCAAGACCTATA
JMSF026M01+ ATTTGATAGCTCTCATCATACTCAGGTTCATTGTTATCAAAACCACCTTCAAGACCTATA
                      ____________________________________________________________
consensus ATTTGATAGCTCTCATCATACTCAGGTTCATTGTTATCAAAACCACCTTCAAGACCTATA
 
. : . : . : . : . : . :
JMFF021J06+ GCCAAAAGAGTTGGTTTCTTGGAAGGTCTATCTTCATCAACTGCCTTCACGGTCTGCTTT
JMFF004N03+ GCCAAAAGAGTTGGTTTCTTGGAAGGTCTATCTTCATCAACTGCCTTCACGGTCTGCTTT
JMFF016K11+ GCCAAAAGAGTTGGTTTCTTGGAAGGTCTATCTTCATCAACTGCCTTCACGGTCTGCTTT
JMFF036J10+ GCCAAAAGAGTTGGTTTCTTGGAAGGTCTATCTTCATCAACTGCCTTCACGGTCTGCTTT
JMSF026M01+ GCCAAAAGAGTTGGTTTCTTGGAAGGTCTATCTTCATCAACTGCCTTCACGGTCTGCTTT
                      ____________________________________________________________
consensus GCCAAAAGAGTTGGTTTCTTGGAAGGTCTATCTTCATCAACTGCCTTCACGGTCTGCTTT
 
. : . : . : . : . : . :
JMFF021J06+ ATATGCAAATAAACTGGGTTTCCAGTCTTTTCATAGTTCCAACCTACATACTCCTTTCCA
JMFF004N03+ ATATGCAAATAAACTGGGTTTCCAGTCTTTTCATAGTTCCAACCTACATACTCCTTTCCA
JMFF016K11+ ATATGCAAATAAACTGGGTTTCCAGTCTTTTCATAGTTCCAACCTACATACTCCTTTCCA
JMFF036J10+ ATATGCAAATAAACTGGGTTTCCAGTCTTTTCATAGTTCCAACCTACATACTCCTTTCCA
JMSF026M01+ ATATGCAAATAAACTGGGTTTCCAGTCTTTTCATAGTTCCAACCTACATACTCCTTTCCA
                      ____________________________________________________________
consensus ATATGCAAATAAACTGGGTTTCCAGTCTTTTCATAGTTCCAACCTACATACTCCTTTCCA
 
. : . : . : . : . : . :
JMFF021J06+ AATGCTAAAAAAGTGCTCATGTCAACAAACAGTCCACCCTCAGATTTCGGAGTATCGAAG
JMFF004N03+ AATGCTAAAAAAGTGCTCATGTCAACAAACAGTCCACCCTCAGATTTCGGAGTATCGAAG
JMFF016K11+ AATGCTAAAAAAGTGCTCATGTCAACAAACAGTCCACCCTCAGATTTCGGAGTATCGAAG
JMFF036J10+ AATGCTAAAAAAGTGCTCATGTCAACAAACAGTCCACCCTCAGATTTCGGAGTATCGAAG
JMSF026M01+ AATGCTAAAAAAGTGCTCATGTCAACAAACAGTCCACCCTCAGATTTCGGAGTATCGAAG
                      ____________________________________________________________
consensus AATGCTAAAAAAGTGCTCATGTCAACAAACAGTCCACCCTCAGATTTCGGAGTATCGAAG
 
. : . : . : . : . : . :
JMFF021J06+ GAGACGCAGCATTCATGCTTGTAGATTCGAGTTGTAGGCTCTGGAATCCGAACTCGGGAG
JMFF004N03+ GAGACGCAGCATTCATGCTTGTAGATTCGAGTTGTAGGCTCTGGAATCCGAACTCGGGAG
JMFF016K11+ GAGACGCAGCATTCATGCTTGTAGATTCGAGTTGTAGGCTCTGGAATCCGAACTCGGGAG
JMFF036J10+ GAGACGCAGCATTCATGCTTGTAGATTCGAGTTGTAGGCTCTGGAATCCGAACTCGGGAG
JMSF026M01+ GAGACGCAGCATTCATGCTTGTAGATTCGAGTTGTAGGCTCTGGAATCCGAACTCGGGAG
                      ____________________________________________________________
consensus GAGACGCAGCATTCATGCTTGTAGATTCGAGTTGTAGGCTCTGGAATCCGAACTCGGGAG
 
. : . : . : . : . : . :
JMFF021J06+ AGATTCGATCGAAGGAGCTCCATCCAATTTCAAACTATATGTATCGGTGTGTGAAAAC
JMFF004N03+ AGATTCGATCGAAGGAGCTCCATCCAATTTCAAACTATATGTATCGGTGTGTGAAAACT
JMFF016K11+ AGATTCGATCGAAGGAGCTCCATCCAATTTCAAACTATATGTATCGGTGTGTGAAAACT
JMFF036J10+ AGATTCGATCGAAGGAGCTCCATCCAATTTCAAACTATATGTATCGGTGTGTGAAAACT
JMSF026M01+ AGATTCGATCGAAGGAGCTCCATCCAATTTCAAACTATATGTATCGGTGTGTGAAAACTC
                      ____________________________________________________________
consensus AGATTCGATCGAAGGAGCTCCATCCAATTTCAAACTATATGTATCGGTGTGTGAAAACTC