Contig 000777:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012F15Sequence467000777 (7)764001105 (6)ref|XP_009792511.1|2e-106PREDICTED: tubby-like F-box protein 3 isoform X2 [Nicotiana sylvestris]
JMFF021L04Sequence568000777 (7)711001105 (6)ref|XP_009624999.1|2e-96PREDICTED: tubby-like F-box protein 3 isoform X2 [Nicotiana tomentosiformis]
JMFS074E09Sequence627000777 (7)
JMSF026I23Sequence620000777 (7)736001105 (6)ref|XP_009792511.1|1e-102PREDICTED: tubby-like F-box protein 3 isoform X2 [Nicotiana sylvestris]
JMSF029O13Sequence612000777 (7)734001105 (6)ref|XP_009624993.1|8e-85PREDICTED: tubby-like F-box protein 3 isoform X1 [Nicotiana tomentosiformis]
JMSF033G02Sequence631000777 (7)753001105 (6)ref|XP_009792511.1|3e-109PREDICTED: tubby-like F-box protein 3 isoform X2 [Nicotiana sylvestris]
JMSF053A07Sequence601000777 (7)860001105 (6)ref|XP_009792511.1|2e-111PREDICTED: tubby-like F-box protein 3 isoform X2 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF033G02+                                                             ATCTTCAGCA
                      ____________________________________________________________
consensus                                                               ATCTTCAGCA
 
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JMSF033G02+           ACACCTCTCTCAAAAGCTCTATAGGCATGTTATTCCAGCAACTCTGCCTCAACCCCTCAT
                      ____________________________________________________________
consensus             ACACCTCTCTCAAAAGCTCTATAGGCATGTTATTCCAGCAACTCTGCCTCAACCCCTCAT
 
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JMSF033G02+           CACCAAATTGACTCCCCTCACACGCCTCCTCCGCCTCCGCCACCGCCACCACAGAGCTGT
JMSF053A07+                                              TCCGCCACCGCCACCACAGAGCTGT
JMFS074E09+                                                       GCCACCACAGAGCTGT
                      ____________________________________________________________
consensus             CACCAAATTGACTCCCCTCACACGCCTCCTCCGCCTCCGCCACCGCCACCACAGAGCTGT
 
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JMSF033G02+           GCCGGCTCCTTGACCTGGACCCATAACCCCACTTCATCTCTCCGCCCGCTTCCACAACTC
JMSF053A07+           GCCGGCTCCTTGACCTGGACCCATAACCCCACTTCATCTCTCCGCCCGCTTCCACAACTC
JMFS074E09+           GCCGGCTCCTTGACCTGGACCCATAACCCCACTTCATCTCTCCGCCCGCTTCCACAACTC
JMSF029O13+                                                        CCGCTTCCACAACTC
JMSF026I23+                                                   TCCGCCCGCTTCCACAACTC
                      ____________________________________________________________
consensus             GCCGGCTCCTTGACCTGGACCCATAACCCCACTTCATCTCTCCGCCCGCTTCCACAACTC
 
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JMSF033G02+           TCTTATCTACAACAACACAACTTTTTTGCACTACTTTCTAATTCCCCAAGAAAATAAATA
JMSF053A07+           TCTTATCTACAACAACACAACTTTTTTGCACTACTTTCTAATTCCCCAAGAAAATAAATA
JMFS074E09+           TCTTATCTACAACAACACAACTTTTTTGCACTACTTTCTAATTCCCCAAGAAAATAAATA
JMSF029O13+           TCTTATCTACAACAACACAACTTTTTTGCACTACTTTCTAATTCCCCAAGNAAATAAATA
JMFF021L04+                                      GCACTACTTTCTAATTCCCCAAGAAAATAAATA
JMSF026I23+           TCTTATCTACAACAACACAACTTTTTTGCACTACTTTCTAATTCCCCAAGAAAATAAATA
                      ____________________________________________________________
consensus             TCTTATCTACAACAACACAACTTTTTTGCACTACTTTCTAATTCCCCAAGAAAATAAATA
 
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JMSF033G02+           ATGCCCAGGAAAGTAATTGGCCTTCAATTCAGATCTGAAACAAGACTTCACTAAATTATG
JMSF053A07+           ATGCCCAGGAAAGTAATTGGCCTTCAATTCAGATCTGAAACAAGACTTCACTAAATTATG
JMFS074E09+           ATGCCCAGGAAAGTAATTGGCCTTCAATTCAGATCTGAAACAAGACTTCACTAAATTATG
JMSF029O13+           ATGCCCAGGAAAGTAATTGGCCTTCAATTCAGATCTGAANCAAGACTTCACTAAATTATG
JMFF021L04+           ATG-CCAGGAAAGTAATTGGCCTTCAATTCAGATCTGAAACAAGACTTCACTAAATTATG
JMSF026I23+           ATGCCCAGGAAAGTAATTGGCCTTCAATTCAGATCTGAAACAAGACTTCACTAAATTATG
                      ____________________________________________________________
consensus             ATGCCCAGGAAAGTAATTGGCCTTCAATTCAGATCTGAAACAAGACTTCACTAAATTATG
 
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JMSF033G02+           ATAAAGATCACACCTTTACGCACATCCACCGACATAAATGGAACAACACTCCGTTCTCAC
JMSF053A07+           ATAAAGATCACACCTTTACGCACATCCACCGACATAAATGGAACAACACTCCGTTCTCAC
JMFS074E09+           ATAAAGATCACACCTTTACGCACATCCACCGACATAAATGGAACAACACTCCGTTCTCAC
JMSF029O13+           ATAAAGATCACACCTTTACGCACATCCACCGACATAAATGGAACAACACTCCGTTCTCAC
JMFF021L04+           ATAAAGATCACACCTTTACGCACATCCACCGACATAAATGGAACAACACTCCGTTCTCAC
JMFF012F15+                       CCTTTACGCACATCCACCGACATAAATGGAACAACACTCCGTTCTCAC
JMSF026I23+           ATAAAGATCACACCTTTACGCACATCCACCGACATAAATGGAACAACACTCCGTTCTCAC
                      ____________________________________________________________
consensus             ATAAAGATCACACCTTTACGCACATCCACCGACATAAATGGAACAACACTCCGTTCTCAC
 
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JMSF033G02+           GGGGAAACAATAGATTTCTTGCACTAAAGCACAGATTTACAGAACCCAGAGCTCAAAGTC
JMSF053A07+           GGGGAAACAATAGATTTCTTGCACTAAAGCACAGATTTACAGAACCCAGAGCTCAAAGTC
JMFS074E09+           GGGGAAACAATAGATTTCTTGCACTAAAGCACAGATTTACAGAACCCAGAGCTCAAAGTC
JMSF029O13+           GGGGAAACNATAGATTTCTTGCACTAAAGCACAGATTTACAGAACCCAGAGCTCAAAGTC
JMFF021L04+           GGGGAAACAATAGATTTCTTGCACTAAAGCACAGATTTACAGAACCCAGAGCTCAAAGTC
JMFF012F15+           GGGGAAACAATAGATTTCTTGCACTAAAGCACAGATTTACAGAACCCAGAGCTCAAAGTC
JMSF026I23+           GGGGAAACAATAGATTTCTTGCACTAAAGCACAGATTTACAGAACCCAGAGCTCAAAGTC
                      ____________________________________________________________
consensus             GGGGAAACAATAGATTTCTTGCACTAAAGCACAGATTTACAGAACCCAGAGCTCAAAGTC
 
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JMSF033G02+           ATTAAACAAATGAAATTACTCGAAAAACAACACAGGAATCTATATATCTGATCATACGAA
JMSF053A07+           ATTAAACAAATGAAATTACTCGAAAAACAACACAGGAATCTATATATCTGATCATACGAA
JMFS074E09+           ATTAAACAAATGAAATTACTCGAAAAACAACACAGGAATCTATATATCTGATCATACGAA
JMSF029O13+           ATTAAACAAATGAAATTACTCGAAAAACAACACAGGAATCTATATATCTGATCNTACGAA
JMFF021L04+           ATTAAACAAATGAAATTACTCGAAAAACAACACAGGAATCTATATATCTGATCATACGAA
JMFF012F15+           ATTAAACAAATGAAATTACTCGAAAAACAACACAGGAATCTATATATCTGATCATACGAA
JMSF026I23+           ATTAAACAAATGAAATTACTCGAAAAACAACACAGGAATCTATATATCTGATCATACGAA
                      ____________________________________________________________
consensus             ATTAAACAAATGAAATTACTCGAAAAACAACACAGGAATCTATATATCTGATCATACGAA
 
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JMSF033G02+           TCCCATATATAAATAAACAAATAAAACTACATTTGCATCGATAGATTTTTAGGGTAGTTG
JMSF053A07+           TCACATATATAAATAAACAAATAAAACTACATTTGCATCGATAGATTTTTAGGGTAGTTG
JMFS074E09+           TCCCATATATAAATAAACAAATAAAACTACATTTGCATCGATAGATTTTTAGGGTAGTTG
JMSF029O13+           TCCCATATATAAATAAACAAATAAAACTACATTTGCATCGATAGATTTTTAGGGTAGTTG
JMFF021L04+           TCCCATATATAAATAAACAAATAAAACTACATTTGCATCGATAGATTTTTAGGGTAGTTG
JMFF012F15+           TCCCATATATAAATAAACAAATAAAACTACATTTGCATCGATAGATTTTTAGGGTAGTTG
JMSF026I23+           TCCCATATATAAATAAACAAATAAAACTACATTTGCATCGATAGATTTTTAGGGTAGTTG
                      ____________________________________________________________
consensus             TCCCATATATAAATAAACAAATAAAACTACATTTGCATCGATAGATTTTTAGGGTAGTTG
 
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JMSF033G02+           GCCTATTAAGGATTAGGTTGGGAAGAAGAGGAAAGAAAAATGTACAGCAAATAGGAGTGT
JMSF053A07+           GCCTATTAAGGATTAGGTTGGGAAGAAGAGGAAAGAAAAATGTACAGCAAATAGGAGTGT
JMFS074E09+           GCCTATTAAGGATTAGGTTGGGAAGAAGAGGAAAGAAAAATGTACAGCAAATAGGAGTGT
JMSF029O13+           GCCTATTAAGGATTAGGTTGGGAAGAAGAGGAAAGAAAAATGTACAGCAAATAGGAGTGT
JMFF021L04+           GCCTATTAAGGATTAGGTTGGGAAGAAGAGGAAAGAAAAATGTACAGCAAATAGGAGTGT
JMFF012F15+           GCCTATTAAGGATTAGGTTGGGAAGAAGAGGAAAGAAAAATGTACAGCAAATAGGAGTGT
JMSF026I23+           GCCTATTAAGGATTAGGTTGGGAAGAAGAGGAAAGAAAAATGTACAGCAAATAGGAGTGT
                      ____________________________________________________________
consensus             GCCTATTAAGGATTAGGTTGGGAAGAAGAGGAAAGAAAAATGTACAGCAAATAGGAGTGT
 
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JMSF033G02+           ACTTTTGTGCAAAGTCCGA                                         
JMSF053A07+           ACTTTTGTGCAAAGTCCGATAACCACAAGAAGATTCAGAGAAGGGTTTTATTCTTTTAGG
JMFS074E09+           ACTTTTGTGCAAAGTCCGATAACCACAAGAAGATTCAGAGAAGGGTTTTATTCTTTTAGG
JMSF029O13+           ACTTTTGTGCAAAGTCCGATAACCACAAGAAGATTCAGAGAAGGGTTTTATTCTTTTAGG
JMFF021L04+           ACTTTTGTGCAAAGTCCGATAACCACAAGAAGATTCAGAGAAGGGTTTTATTCTTTTAGG
JMFF012F15+           ACTTTTGTGCAAAGTCCGATAACCACAAGAAGATTCAGAGAAGGGTTTTATTCTTTTAGG
JMSF026I23+           ACTTTTGTGCAAAGTCCGATAACCACAAGAAGATTCAGAGAAGGGTTTTATTCTTTTAGG
                      ____________________________________________________________
consensus             ACTTTTGTGCAAAGTCCGATAACCACAAGAAGATTCAGAGAAGGGTTTTATTCTTTTAGG
 
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JMSF053A07+           ATTTGAGCCGACTAAGCTGGAAGAAGAGGGA                             
JMFS074E09+           ATTTGAGCCGACTAAGCTGGAAGAAGAGGGACTGAGGGATGGGGTGGGGTGGGGGTGGTT
JMSF029O13+           ATTTGAGCCGACTAAGCTGGAAGAAGAGGGACTGAGGGATGGGGTGGGGTGGGGGTGGTT
JMFF021L04+           ATTTGAGCCGACTAAGCTGGAAGAAGAGGGACTGAGGGATGGGGTGGGGTGGGGGTGGTT
JMFF012F15+           ATTTGAGCCGACTAAGCTGGAAGAAGAGGGACTGAGGGATGGGGTGGGGTGGGGGTGGTT
JMSF026I23+           ATTTGAGCCGACTAAGCTGGAAGAAGAGGGACTGAGGGATGGGGTGGGGTGGGGGTGGTT
                      ____________________________________________________________
consensus             ATTTGAGCCGACTAAGCTGGAAGAAGAGGGACTGAGGGATGGGGTGGGGTGGGGGTGGTT
 
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JMFS074E09+           AAAGAATAAAA                                                 
JMSF029O13+           AAAGAATAAAAGACTCGAGAGAGAGTGCTAGTGGACAATGGACATAGAGATGAA      
JMFF021L04+           AAAGAATAAAAGACTCGAGAGAGAGTGCTAGTGGACAATGGACATAGAGATGAA      
JMFF012F15+           AAAGAATAAAAGACTCGAGAGAGAGTGCTAGTGGACAATGGACATAGAGATGAA      
JMSF026I23+           AAAGAATAAAAGACTCGAGAGAGAGTGCTAGTGGACAATGGACATAGAGATGAATCATTC
                      ____________________________________________________________
consensus             AAAGAATAAAAGACTCGAGAGAGAGTGCTAGTGGACAATGGACATAGAGATGAATCATTC