Contig 000772:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF026D11Sequence653000772 (2)ref|XP_009597261.1|9e-68PREDICTED: probable inactive shikimate kinase like 2, chloroplastic [Nicotiana 784017158ref|XP_011069700.1|5e-43PREDICTED: probable inactive shikimate kinase like 2, chloroplastic [Sesamum in
JMSF043H03Sequence728000772 (2)ref|XP_009597261.1|4e-81PREDICTED: probable inactive shikimate kinase like 2, chloroplastic [Nicotiana

Alignment

This contig is upended


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JMSF043H03+                                                               CCTACTTG
                      ____________________________________________________________
consensus                                                                 CCTACTTG
 
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JMSF043H03+           CCCATGAATCAATGGATTCCTTGACATAAGTTTCCAAAAGTTCCATTGTAGAGAGTGGAG
                      ____________________________________________________________
consensus             CCCATGAATCAATGGATTCCTTGACATAAGTTTCCAAAAGTTCCATTGTAGAGAGTGGAG
 
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JMSF043H03+           TATACCCAAGACCAACTGCAAGTTCTCGAGCAATTGTCTGATTGATTTCTGTTGATTCTC
JMSF026D11+                  AAGACCAACTGCAAGTTCTCGAGCAATTGTCTGATTGATTTCTGTTGATTCTC
                      ____________________________________________________________
consensus             TATACCCAAGACCAACTGCAAGTTCTCGAGCAATTGTCTGATTGATTTCTGTTGATTCTC
 
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JMSF043H03+           CAACTAAGTATATNGATGTTCCTTTCAGAAGTTGCTTAATTCCTGTTGTTAGGGATTCCC
JMSF026D11+           CAACTAAGTATATTGATGTTCCTTTCAGAAGTTGCTTAATTCCTGTTGTTAGGGATTCCC
                      ____________________________________________________________
consensus             CAACTAAGTATATTGATGTTCCTTTCAGAAGTTGCTTAATTCCTGTTGTTAGGGATTCCC
 
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JMSF043H03+           AGGACTCCACAATGTCAGGCCATTTCAGTTCTGGATCTTGTTTCTTCAGGTTAATAACCA
JMSF026D11+           AGGACTCCACAATGTCAGGCCATTTCAGTTCTGGATCTTGTTTCTTCAGGTTAATAACCA
                      ____________________________________________________________
consensus             AGGACTCCACAATGTCAGGCCATTTCAGTTCTGGATCTTGTTTCTTCAGGTTAATAACCA
 
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JMSF043H03+           ATTGATCATCATCTATATACCATATNGTCTCTGTAGGCTTTATCTTCCCATACAGAGCAC
JMSF026D11+           ATTGATCATCATCTATATACCATATTGTCTCTGTAGGCTTTATCTTCCCATACAGAGCAC
                      ____________________________________________________________
consensus             ATTGATCATCATCTATATACCATATTGTCTCTGTAGGCTTTATCTTCCCATACAGAGCAC
 
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JMSF043H03+           TGGTCTCCATGAGAGTCTGAAGAGATCCATATTGCAGCATTCTAATAGATAAAGAACTCT
JMSF026D11+           TGGTCTCCATGAGAGTCTGAAGAGATCCATATTGCAGCATTCTAATAGATAAAGAACTCT
                      ____________________________________________________________
consensus             TGGTCTCCATGAGAGTCTGAAGAGATCCATATTGCAGCATTCTAATAGATAAAGAACTCT
 
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JMSF043H03+           CATTTGCATCAACAGATATATCATTAGAACTTATGTCTCCGTTACCAAGATCTAATCGCA
JMSF026D11+           CATTTGCATCAACAGATATATCATTAGAACTTATGTCTCCGTTACCAAGATCTAATCGCA
                      ____________________________________________________________
consensus             CATTTGCATCAACAGATATATCATTAGAACTTATGTCTCCGTTACCAAGATCTAATCGCA
 
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JMSF043H03+           ACTCCATNTCAGACGAACCACTATCATTAAACTCATAATCGGTCGTGTTTGTGAAGACAG
JMSF026D11+           ACTCCATCTCAGACGAACCACTATCATTAAACTCATAATCGGTCGTGTTTGTGAAGACAG
                      ____________________________________________________________
consensus             ACTCCATCTCAGACGAACCACTATCATTAAACTCATAATCGGTCGTGTTTGTGAAGACAG
 
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JMSF043H03+           TGGGGAGAGAGCTGCAGAGAGGGCGAGTGGGTATCCTGGAATTGCAAGAAGCCAAACGGC
JMSF026D11+           TGGGGAGAGAGCTGCAGAGAGGGCGAGTGGGTATCCTGGAATTGCAAGAAGCCAAACGGC
                      ____________________________________________________________
consensus             TGGGGAGAGAGCTGCAGAGAGGGCGAGTGGGTATCCTGGAATTGCAAGAAGCCAAACGGC
 
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JMSF043H03+           GAATTATCAAAGAATTGGGCGTCGAAAATTTAGGGTTTGAGAAGGCAATGAAACATTTTG
JMSF026D11+           GAATTATCAAAGAATTGGGCGTCGAAAATTTAGGGTTTGAGAAGGCAATGAAACATTTTG
                      ____________________________________________________________
consensus             GAATTATCAAAGAATTGGGCGTCGAAAATTTAGGGTTTGAGAAGGCAATGAAACATTTTG
 
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JMSF043H03+           GAGAGTAAACATTGCAAGTTTTGATAGTATTGTACGGGACTAGAAATGAGAGAGTTGCTG
JMSF026D11+           GAGAGTAAACATTGCAAGTTTTGATAGTATTGTACGGGACTAGAAATGAGAGAGTTGCTG
                      ____________________________________________________________
consensus             GAGAGTAAACATTGCAAGTTTTGATAGTATTGTACGGGACTAGAAATGAGAGAGTTGCTG
 
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JMSF043H03+           CTGCTGAGGAAGTGGCCATTGATGAAGATAGCAGTTATTGTGGTTACTGCCTATCAC   
JMSF026D11+           CTGCTGAGGAAGTGGCCATTGATGAAGATAGCAGTTATTGTGGTTACTGCCTATCACACC
                      ____________________________________________________________
consensus             CTGCTGAGGAAGTGGCCATTGATGAAGATAGCAGTTATTGTGGTTACTGCCTATCACACC