Contig 000763:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF025H21Sequence129000763 (2)340004273 (2)ref|XP_004154671.1|66.6PREDICTED: uncharacterized protein LOC101231578 [Cucumis sativus]
JMSF035J21Sequence580000763 (2)ref|XP_010315938.1|9e-68PREDICTED: selenoprotein O [Solanum lycopersicum]629004273 (2)gb|KJB55322.1|6e-84hypothetical protein B456_009G070700 [Gossypium raimondii]

Alignment

This contig is upended


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JMSF035J21+ GAGTTTAGAACCTCTCCAAGTGTTATTGCACGACCATCAC
                      ____________________________________________________________
consensus GAGTTTAGAACCTCTCCAAGTGTTATTGCACGACCATCAC
 
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JMSF035J21+ CTAACTGGCCAGCCCACATTCCAAATTGATGCCCTCCATAGTTTTGGGCATAAGGCATCG
                      ____________________________________________________________
consensus CTAACTGGCCAGCCCACATTCCAAATTGATGCCCTCCATAGTTTTGGGCATAAGGCATCG
 
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JMSF035J21+ ATCCCACCAAAGGTGAAGCTCCAGAGAATAACAGTGGGAAATCTGATCTCTCGAATTCTT
                      ____________________________________________________________
consensus ATCCCACCAAAGGTGAAGCTCCAGAGAATAACAGTGGGAAATCTGATCTCTCGAATTCTT
 
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JMSF035J21+ TAGGATCCAATTCAAGAACCTTGGCAACCGAGTCTGACCATGCAACAAGCTGGGGATTCT
                      ____________________________________________________________
consensus TAGGATCCAATTCAAGAACCTTGGCAACCGAGTCTGACCATGCAACAAGCTGGGGATTCT
 
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JMSF035J21+ CCACCTCAGCAGAGGGAGATAACTTAGTATAGCAAGCATGCAACACCTCCCTGGGCATGT
                      ____________________________________________________________
consensus CCACCTCAGCAGAGGGAGATAACTTAGTATAGCAAGCATGCAACACCTCCCTGGGCATGT
 
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JMSF035J21+ TATCGGTCCTGGGATCACCCGGCAGTTCTCGAACGAAAGAATGATCCCAATTTAGCTCTT
                      ____________________________________________________________
consensus TATCGGTCCTGGGATCACCCGGCAGTTCTCGAACGAAAGAATGATCCCAATTTAGCTCTT
 
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JMSF035J21+ GGAGCTTGAGTTTACAACTGGTGGAACTCTCCAAGCTCTGTTTCCCGAAACCATCGGTTA
                      ____________________________________________________________
consensus GGAGCTTGAGTTTACAACTGGTGGAACTCTCCAAGCTCTGTTTCCCGAAACCATCGGTTA
 
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JMSF035J21+ CTGAATCGACGGTGGCGGAGGCGGCAGCGGCAGCGGTGGAGGGCGGTGGGGAGTCCATGG
                      ____________________________________________________________
consensus CTGAATCGACGGTGGCGGAGGCGGCAGCGGCAGCGGTGGAGGGCGGTGGGGAGTCCATGG
 
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JMSF035J21+ ACGCAGTGAATAAGGGGCGGCGGCGCAGTTGCAGCGGCCTGCAGGGGAATCTGGGGCAGA
JMSF025H21+ GCAGA
                      ____________________________________________________________
consensus ACGCAGTGAATAAGGGGCGGCGGCGCAGTTGCAGCGGCCTGCAGGGGAATCTGGGGCAGA
 
. : . : . : . : . : . :
JMSF035J21+ GATGTTTGGGGATGTATAGGGCGGTGGCGGTGAGGGAAGAAGCAGGGGCGTGAGAGAGC
JMSF025H21+ GATGTTTGGGGATGTATAGGGCGGTGNCGGTGAGGGAAGAAGCAGGGGCGTGAGAGAGCG
                      ____________________________________________________________
consensus GATGTTTGGGGATGTATAGGGCGGTGGCGGTGAGGGAAGAAGCAGGGGCGTGAGAGAGCG
 
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JMSF025H21+ AAGCCGAGAAATGGGCAAGCATTTGCATTTTTAACCACTCTCCNGTCAAGTGTGTAGCCA
                      ____________________________________________________________
consensus AAGCCGAGAAATGGGCAAGCATTTGCATTTTTAACCACTCTCCNGTCAAGTGTGTAGCCA