Contig 000747:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS028E03Sequence654000747 (2)ref|XP_009792711.1|1e-28PREDICTED: uncharacterized protein LOC104239698 isoform X3 [Nicotiana sylvestri
JMSF023N23Sequence346000747 (2)

Alignment

This contig is upended


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JMFS028E03+                                                    GATTACCACCATCATGCCA
                      ____________________________________________________________
consensus                                                      GATTACCACCATCATGCCA
 
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JMFS028E03+           CCTGTCAGAAGTAGGCAAAGCTCTGTTTTCAGTTGTTTCTTTGGCAGAAGCATTCTCAAC
                      ____________________________________________________________
consensus             CCTGTCAGAAGTAGGCAAAGCTCTGTTTTCAGTTGTTTCTTTGGCAGAAGCATTCTCAAC
 
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JMFS028E03+           AGCACGGCGATCTGGTTTCCTACGATCCCTTCTAGCAAGTGAACCAGTTTCCCTCTCTTC
                      ____________________________________________________________
consensus             AGCACGGCGATCTGGTTTCCTACGATCCCTTCTAGCAAGTGAACCAGTTTCCCTCTCTTC
 
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JMFS028E03+           CTCACGCCAACGTCGACCATCAGTCTCTGCTGTGGTCCTCCTCCAATCCTTTTTATCCTC
                      ____________________________________________________________
consensus             CTCACGCCAACGTCGACCATCAGTCTCTGCTGTGGTCCTCCTCCAATCCTTTTTATCCTC
 
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JMFS028E03+           AGGAGCATCTGTACGCCAGGCCTCCTTCTGACTTGAATCTGCAGAACTTCCGAGGGACAA
                      ____________________________________________________________
consensus             AGGAGCATCTGTACGCCAGGCCTCCTTCTGACTTGAATCTGCAGAACTTCCGAGGGACAA
 
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JMFS028E03+           TGAACTAGGAGTACGCATGTCTGTCTTAGTGTCAATTGGTTTAGCATAAAGCCACTGCGG
                      ____________________________________________________________
consensus             TGAACTAGGAGTACGCATGTCTGTCTTAGTGTCAATTGGTTTAGCATAAAGCCACTGCGG
 
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JMFS028E03+           AGACAAAGGAATGCTGCTATCATGCACTGCTTGATCCTTAGACAAGTCAAGCACTCCTCC
                      ____________________________________________________________
consensus             AGACAAAGGAATGCTGCTATCATGCACTGCTTGATCCTTAGACAAGTCAAGCACTCCTCC
 
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JMFS028E03+           TGTGAAGGACTTGTCCTCATCGCTACCTTTCGGAATCCAAGTCTGATCGGAGGACCTTGA
                      ____________________________________________________________
consensus             TGTGAAGGACTTGTCCTCATCGCTACCTTTCGGAATCCAAGTCTGATCGGAGGACCTTGA
 
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JMFS028E03+           CGAGAGGAGGTCGTCGGGGAGATCGAGATTTCCTTCAGCCATCGGGTATTGGATGCAATT
                      ____________________________________________________________
consensus             CGAGAGGAGGTCGTCGGGGAGATCGAGATTTCCTTCAGCCATCGGGTATTGGATGCAATT
 
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JMFS028E03+           CGACAGAGAGTTAAATATCAGCGGTTACCGATAGAAGCAGAGAGGTTGAGAGAGAGAGAA
JMSF023N23+                                                                      A
                      ____________________________________________________________
consensus             CGACAGAGAGTTAAATATCAGCGGTTACCGATAGAAGCAGAGAGGTTGAGAGAGAGAGAA
 
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JMFS028E03+           AGCTGAAGAGAATGGCGGAAGAGAGTTTTAGGGTTCACAAAATCTATGAACAGCAGCAGT
JMSF023N23+           AGCTGAAGAGAANGGCGGAAGAGAGTTTTAGGGTTCACAAAATCTATGAACAACAGNNGT
                      ____________________________________________________________
consensus             AGCTGAAGAGAATGGCGGAAGAGAGTTTTAGGGTTCACAAAATCTATGAACAGCAGCAGT
 
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JMFS028E03+           TACAGAGAGGAGA                                               
JMSF023N23+           TACAGAGAGGAGAGAACGAGAANGAAATGGCAAGGTGTGTTTGGGTAGTCGCAACAGCTC
                      ____________________________________________________________
consensus             TACAGAGAGGAGAGAACGAGAANGAAATGGCAAGGTGTGTTTGGGTAGTCGCAACAGCTC