Contig 000740:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF047P15Sequence631000740 (3)ref|XP_004230684.1|5e-80PREDICTED: magnesium transporter MRS2-3 [Solanum lycopersicum]580004144 (3)ref|XP_004136933.1|2e-76PREDICTED: magnesium transporter MRS2-3-like [Cucumis sativus] ref|XP_004159919.
JMSF022L24Sequence643000740 (3)ref|XP_004230684.1|2e-79PREDICTED: magnesium transporter MRS2-3 [Solanum lycopersicum]808004144 (3)ref|XP_009603566.1|3e-112PREDICTED: magnesium transporter MRS2-3 isoform X1 [Nicotiana tomentosiformis]
JMSF027F13Sequence683000740 (3)ref|XP_004230684.1|5e-62PREDICTED: magnesium transporter MRS2-3 [Solanum lycopersicum]739021478ref|XP_009603566.1|2e-69PREDICTED: magnesium transporter MRS2-3 isoform X1 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF027F13+ C
                      ____________________________________________________________
consensus C
 
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JMSF027F13+ AGAATTCAAAACAATTTTATAAAGGCAAATTTAATAATTCATGCTAAAGTATTACAGTGC
                      ____________________________________________________________
consensus AGAATTCAAAACAATTTTATAAAGGCAAATTTAATAATTCATGCTAAAGTATTACAGTGC
 
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JMSF027F13+ TGTAACAGTCTAACAGAAATAATAGCAATTCAGAAATTTAAAGAAATTACTTCTATCAGT
                      ____________________________________________________________
consensus TGTAACAGTCTAACAGAAATAATAGCAATTCAGAAATTTAAAGAAATTACTTCTATCAGT
 
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JMSF027F13+ TTCTTTCAACTGTGAACATTTTAAGCCAATATATATATACGCATTTCGTATAGATAAAGA
                      ____________________________________________________________
consensus TTCTTTCAACTGTGAACATTTTAAGCCAATATATATATACGCATTTCGTATAGATAAAGA
 
. : . : . : . : . : . :
JMFF047P15+ CCTGGGAGTTGGTAGCTTGGTGGTGACGCAGAATTCTGTGCTGGAGCTCATCGACG
JMSF027F13+ GAAACCTGGGAGTTGGTAGCTTGGTGGTGACGCAGAATTCTGTGCTGGAGCTCATCGACG
JMSF022L24+ CCTGGGAGTTGGTAGCTTGGTGGTGACGCAGAATTCTGTGCTGGAGCTCATCGACG
                      ____________________________________________________________
consensus GAAACCTGGGAGTTGGTAGCTTGGTGGTGACGCAGAATTCTGTGCTGGAGCTCATCGACG
 
. : . : . : . : . : . :
JMFF047P15+ AAAGGAGCAACAGAAGGGTCTCTAGAATTGAGGAGAAGGACCTCTTGTGCTGTAATAATG
JMSF027F13+ AAAGGAGCAACAGAAGGGTCTCTAGAATTGAGGAGAAGGACCTCTTGTGCTGTAATAATG
JMSF022L24+ AAAGGAGCAACAGAAGGGTCTCTAGAATTGAGGAGAAGGACCTCTTGTGCTGTAATAATG
                      ____________________________________________________________
consensus AAAGGAGCAACAGAAGGGTCTCTAGAATTGAGGAGAAGGACCTCTTGTGCTGTAATAATG
 
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JMFF047P15+ GCCTTGATATGCTCCAGATTGATGACGATTGCCCGCTCACGGCCGAGCACAGTGGAAGGG
JMSF027F13+ GCCTTGATATGCTCCAGATTGATGACGATTGCCCGCTCACGGCCGAGCACAGTGGAAGGG
JMSF022L24+ GCCTTGATATGCTCCAGATTGATGACGATTGCCCGCTCACGGCCGAGCACAGTGGAAGGG
                      ____________________________________________________________
consensus GCCTTGATATGCTCCAGATTGATGACGATTGCCCGCTCACGGCCGAGCACAGTGGAAGGG
 
. : . : . : . : . : . :
JMFF047P15+ TAAGACAGAAGTGGGTCCAGAATACGAAGATCCCGGGCCGGAAGCCCAGTCCGGCGCATG
JMSF027F13+ TAAGACAGAAGTGGGTCCAGAATACGAAGATCCCGGGCCGGAAGCCCAGTCCGGCGCATG
JMSF022L24+ TAAGACAGAAGTGGGTCCAGAATACGAAGATCCCGGGCCGGAAGCCCAGTCCGGCGCATG
                      ____________________________________________________________
consensus TAAGACAGAAGTGGGTCCAGAATACGAAGATCCCGGGCCGGAAGCCCAGTCCGGCGCATG
 
. : . : . : . : . : . :
JMFF047P15+ ATAGCATGTTTTCCGACCTCCACCACCTGCGCTTGCCCAGTAGAGTCCAGGAGAAGCCAT
JMSF027F13+ ATAGCATGTTTTCCGACCTCCACCACCTGCGCTTGCCCAGTAGAGTCCAGGAGAAGCCAT
JMSF022L24+ ATAGCATGTTTTCCGACCTCCACCACCTGCGCTTGCCCAGTAGAGTCCAGGAGAAGCCAT
                      ____________________________________________________________
consensus ATAGCATGTTTTCCGACCTCCACCACCTGCGCTTGCCCAGTAGAGTCCAGGAGAAGCCAT
 
. : . : . : . : . : . :
JMFF047P15+ GGCCGGACCCCGGCAGCCTTCTTTCGCAGCCCACCGCCGACGATTACGCCTCCCGGCAAG
JMSF027F13+ GGCCGGACCCCGGCAGCCTTCTTTCGCAGCCCACCGCCGACGATTACGCCTCCCGGCAAG
JMSF022L24+ GGCCGGACCCCGGCAGCCTTCTTTCGCAGCCCACCGCCGACGATTACGCCTCCCGGCAAG
                      ____________________________________________________________
consensus GGCCGGACCCCGGCAGCCTTCTTTCGCAGCCCACCGCCGACGATTACGCCTCCCGGCAAG
 
. : . : . : . : . : . :
JMFF047P15+ GGATTGTTAGTGCGGAGGGGATCTCCATCGTCGACCGGCGAATCGGCGTTGAGCTTCGCC
JMSF027F13+ GGATTGTTAGTGCGGAGGGGATCTCCATCGTCGACCGGCGAATCGGCGTTGAGCTTCGCC
JMSF022L24+ GGATTGTTAGTGCGGAGGGGATCTCCATCGTCGACCGGCGAATCGGCGTTGAGCTTCGCC
                      ____________________________________________________________
consensus GGATTGTTAGTGCGGAGGGGATCTCCATCGTCGACCGGCGAATCGGCGTTGAGCTTCGCC
 
. : . : . : . : . : . :
JMFF047P15+ GGAGGATTGCCCTTCATCAGTGTTCGTAACTGAACTTTTCAGTTAAAAAGTAGGATCGGC
JMSF027F13+ GGAGGATTGCCCTTCATCAGTGTTCGTAACTGAACTTTTCAGTTAAAAAGTAGGATCGGC
JMSF022L24+ GGAGGATTGCCCTTCATCAGTGTTCGTAACTGAACTTTTCAGTTAAAAAGTAGGATCGGC
                      ____________________________________________________________
consensus GGAGGATTGCCCTTCATCAGTGTTCGTAACTGAACTTTTCAGTTAAAAAGTAGGATCGGC
 
. : . : . : . : . : . :
JMFF047P15+ AGTTCGGCACCTTTC
JMSF027F13+ AGTTCGGCACCTTTC
JMSF022L24+ AGTTCGGCACCTTTCTCCCAGAAAATTACCAAAAATACGAGTCATTTATTTTTATTTTTC
                      ____________________________________________________________
consensus AGTTCGGCACCTTTCTCCCAGAAAATTACCAAAAATACGAGTCATTTATTTTTATTTTTC