| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF017J04 | Sequence | 524 | 000736 (9) | ref|XP_006360794.1| | 1e-61 | PREDICTED: FRIGIDA-like protein 4a-like [Solanum tuberosum] | 774 | 007003 (9) | ref|XP_011071583.1| | 6e-81 | PREDICTED: FRIGIDA-like protein 4a [Sesamum indicum] |
| JMFF019G08 | Sequence | 530 | 000736 (9) | ref|XP_006360794.1| | 1e-65 | PREDICTED: FRIGIDA-like protein 4a-like [Solanum tuberosum] | 734 | 007003 (9) | ref|XP_006419936.1| | 8e-56 | hypothetical protein CICLE_v100047531mg, partial [Citrus clementina] gb|ESR33176 |
| JMFF022I09 | Sequence | 470 | 000736 (9) | ref|XP_006360794.1| | 3e-52 | PREDICTED: FRIGIDA-like protein 4a-like [Solanum tuberosum] | 761 | 007003 (9) | ref|XP_006419936.1| | 5e-60 | hypothetical protein CICLE_v100047531mg, partial [Citrus clementina] gb|ESR33176 |
| JMFF030L01 | Sequence | 420 | 000736 (9) | ref|XP_006360794.1| | 2e-42 | PREDICTED: FRIGIDA-like protein 4a-like [Solanum tuberosum] | 728 | 007003 (9) | ref|XP_006419936.1| | 2e-72 | hypothetical protein CICLE_v100047531mg, partial [Citrus clementina] gb|ESR33176 |
| JMFF051B04 | Sequence | 620 | 000736 (9) | ref|XP_009784382.1| | 2e-79 | PREDICTED: FRIGIDA-like protein 4a [Nicotiana sylvestris] | 506 | 007003 (9) | gb|KDP40175.1| | 5e-15 | hypothetical protein JCGZ_02173 [Jatropha curcas] |
| JMFS042C05 | Sequence | 628 | 000736 (9) | ref|XP_006360794.1| | 4e-87 | PREDICTED: FRIGIDA-like protein 4a-like [Solanum tuberosum] | |||||
| JMFS077F08 | Sequence | 619 | 000736 (9) | ref|XP_006360794.1| | 2e-87 | PREDICTED: FRIGIDA-like protein 4a-like [Solanum tuberosum] | |||||
| JMSF022A21 | Sequence | 638 | 000736 (9) | ref|XP_009784382.1| | 2e-81 | PREDICTED: FRIGIDA-like protein 4a [Nicotiana sylvestris] | |||||
| JMSF053G03 | Sequence | 674 | 000736 (9) | ref|XP_006360794.1| | 4e-87 | PREDICTED: FRIGIDA-like protein 4a-like [Solanum tuberosum] | 905 | 007003 (9) | ref|XP_011071583.1| | 8e-87 | PREDICTED: FRIGIDA-like protein 4a [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
JMFS077F08+ CC
JMFF051B04+ CC
JMFS042C05+ CCCAAATCATTGCTCC
JMSF053G03+ CC
____________________________________________________________
consensus CCCAAATCATTGCTCC
. : . : . : . : . : . :
JMFS077F08+ TCTCGCTCTTCAGCTCCCTCTTGTCCACCGGGAACACCTCAGAAATCGCCTCCATAACGA
JMFF051B04+ TCTCGCTCTTCAGCTCCCTC-TGTCCACCGGGANCACCTCAGAAATCGCCTCCATAACGA
JMFS042C05+ TCTCGCTCTTCAGCTCCCTCTTGTCCACCGGGAACACCTCAGAAATCGCCTCCATAACGA
JMSF053G03+ TCTCGCTCTTCAGCTCCCTCTTGTCCACCGGGAACACCTCAGAAATCGCCTCCATAACGA
JMSF022A21+ GTCCACCGGGAACACCTCAGAAATCGCCTCCATAACGA
____________________________________________________________
consensus TCTCGCTCTTCAGCTCCCTCTTGTCCACCGGGAACACCTCAGAAATCGCCTCCATAACGA
. : . : . : . : . : . :
JMFS077F08+ ACTTGGGGGGGTCCACACAGTCTCCTAGGGCTTTCCGGATTTCGGACCTCAAAGACTCCA
JMFF051B04+ ACTTGGGGGGGTCCACACAGTCTCCTAGGGCTTTCCGGATNTCGGACCTCAAAGACTCCA
JMFS042C05+ ACTTGGGGGGGTCCACACAGTCTCCTAGGGCTTTCCGGATTTCGGACCTCAAAGACTCCA
JMSF053G03+ ACTTGGGGGGGTCCACACAGTCTCCTAGGGCTTTCCGGATTTCGGACCTCAAAGACTCCA
JMFF019G08+ GGCTTTCCGGATTTCGGACCTCAAAGACTCCA
JMFF017J04+ ACTCCA
JMSF022A21+ ACTTGGGGGGGTCCACACAGTCTCCTAGGGCTTTCCGGATTTCGGACCTCAAAGACTCCA
____________________________________________________________
consensus ACTTGGGGGGGTCCACACAGTCTCCTAGGGCTTTCCGGATTTCGGACCTCAAAGACTCCA
. : . : . : . : . : . :
JMFS077F08+ GCTCCTTCTTCCGAACAATCACGAAGCTCCAGAAGCTTCTGGAATCCATCTGGACACAAA
JMFF051B04+ GCTCCTTCTTCCGAACAATCACGAAGCTCCAGAAGCTTCTGGAATCCATCTGGACACAAA
JMFS042C05+ GCTCCTTCTTCCGAACAATCACGAAGCTCCAGAAGCTTCTGGAATCCATCTGGACACAAA
JMSF053G03+ GCTCCTTCTTCCGAACAATCACGAAGCTCCAGAAGCTTCTGGAATCCATCTGGACACAAA
JMFF019G08+ GCTCNTTCTTCCGAACAATCACGAAGCTCCAGAAGCTTCTGGAATCCATCTGGACACAAA
JMFF017J04+ GCTCCTTCTTCCGAACAATCANGAAGCTCCAGAAGCTTCTGGAATCCATCTGGACACAAA
JMFF022I09+ TGGACACAAA
JMSF022A21+ GCTCCTTCTTCCGAACAATCACGAAGCTCCAGAAGCTTCTGGAATCCATCTGGACACAAA
____________________________________________________________
consensus GCTCCTTCTTCCGAACAATCACGAAGCTCCAGAAGCTTCTGGAATCCATCTGGACACAAA
. : . : . : . : . : . :
JMFS077F08+ AAGACCTCAGCTTTAACAGCAAACCCGCGGAATTATCAACCTCCGGCTCCTCCGAACCCC
JMFF051B04+ AAGACCTCAGCTTTAACAGCAAACCCGCGGAATTATCAACCTCCGGCTCCTCCGAACCCC
JMFS042C05+ AAGACCTCAGCTTTAACAGCAAACCCGCGGAATTATCAACCTCCGGCTCCTCCGAACCCC
JMSF053G03+ AAGACCTCAGCTTTAACAGCAAACCCGCGGAATTATCAACCTCCGGCTCCTCCGAACCCC
JMFF019G08+ AAGACCTCAGCTTTAACAGCAAACCCGCGGAATTATCAACCTCCGGCTCCTCCGAACCCC
JMFF017J04+ AAGACCTCAGCTTTAACAGCAAACCCGCGGAATTATCAACCTCCGGCTCCTCCGAACCCC
JMFF022I09+ AAGACCTCAGCTTTAACAGCAAACCCGCGGAATTATCAACCTCCGGCTCCTCCGAACCCC
JMFF030L01+ ACCTCCGGCTCCTCCGAACCCC
JMSF022A21+ AAGACCTCAGCTTTAACAGCAAACCCGCGGAATTATCAACCTCCGGCTCCTCCGAACCCC
____________________________________________________________
consensus AAGACCTCAGCTTTAACAGCAAACCCGCGGAATTATCAACCTCCGGCTCCTCCGAACCCC
. : . : . : . : . : . :
JMFS077F08+ CGGCGTTCCCGAATTCCACGAGCGCAGCCCTCTTGCTCTCGTCGACTTTCTTGAGAGTAA
JMFF051B04+ CGGCGTTCCCGAATTCCACGAGCGCAGCCCTCTTGCTCTCGTCGACTTTCTTGAGAGTAA
JMFS042C05+ CGGCGTTCCCGAATTCCACGAGCGCAGCCCTCTTGCTCTCGTCGACTTTCTTGAGAGTAA
JMSF053G03+ CGGCGTTCCCGAATTCCACGAGCGCAGCCCTCTTGCTCTCGTCGACTTTCTTGAGAGTAA
JMFF019G08+ CGGCGTTCCCGAATTCCACGAGCGCAGCCCTCTTGCTCTCGTCGACTTTCTTGAGAGTAA
JMFF017J04+ CGGCGTTCCCGAATTCCACGAGCGCAGCCCTCTTGCTCTCGTCGACTTTCTTGAGAGTAA
JMFF022I09+ CGGCGTTCCCGAATTCCACGAGCGCAGCCCTCTTGCTCTCGTCGACTTTCTTGAGAGTAA
JMFF030L01+ CGGCGTTCCCGAATTCCACGAGCGCAGCCCTCTTGCTCTCGTCGACTTTCTTGAGAGTAA
JMSF022A21+ CGGCGTTCCCGAATTCCACGAGCGCAGCCCTCTTGCTCTCGTCGACTTTCTTGAGAGTAA
____________________________________________________________
consensus CGGCGTTCCCGAATTCCACGAGCGCAGCCCTCTTGCTCTCGTCGACTTTCTTGAGAGTAA
. : . : . : . : . : . :
JMFS077F08+ TGGAGATGGAGGCGGCAATAGACGTCTCGCGCTTCTCCAGCACCTCAAGGGACTGCTTGG
JMFF051B04+ TGGAGATGGAGGCGGCAATAGACGTCTCGCGCTTCTCCAGCACCTCAAGGGACTGCTTGG
JMFS042C05+ TGGAGATGGAGGCGGCAATAGACGTCTCGCGCTTCTCCAGCACCTCAAGGGACTGCTTGG
JMSF053G03+ TGGAGATGGAGGCGGCAATAGACGTCTCGCGCTTCTCCAGCACCTCAAGGGACTGCTTGG
JMFF019G08+ TGGAGATGGAGGCGGCAATAGACGTCTCGCGCTTCTCCAGCACCTCAAGGGACTGCTTGG
JMFF017J04+ TGGAGATGGAGGCGGCAANNGACGTCTCGCGCTTCTCCAGCACCTCAAGGGACTGCTTGG
JMFF022I09+ TGGAGATGGAGGCGGCAATAGACGTCTCGCGCTTCTCCAGCACCTCAAGGGACTGCTTGG
JMFF030L01+ TGGAGATGGAGGCGGCAATAGACGTCTCGCGCTTCTCCAGCACCTCAAGGGACTGCTTGG
JMSF022A21+ TGGAGATGGAGGCGGCAATAGACGTCTCGCGCTTCTCCAGCACCTCAAGGGACTGCTTGG
____________________________________________________________
consensus TGGAGATGGAGGCGGCAATAGACGTCTCGCGCTTCTCCAGCACCTCAAGGGACTGCTTGG
. : . : . : . : . : . :
JMFS077F08+ TCTGGGTGTCTAGGGTTTGCAGCTTGGCCTTGAGGGCTTCAGACTTCCTCAAAAGATCCT
JMFF051B04+ TCTGGGTGTCTAGGGTTTGCAGCTTGGCCTTGAGGGCTTCAGACTTCCTCAAAAGATCCT
JMFS042C05+ TCTGGGTGTCTAGGGTTTGCAGCTTGGCCTTGAGGGCTTCAGACTTCCTCAAAAGATCCT
JMSF053G03+ TCTGGGTGTCTAGGGTTTGCAGCTTGGCCTTGAGGGCTTCAGACTTCCTCAAAAGATCCT
JMFF019G08+ TCTGGGTGTCTAGGGTTTGCAGCTTGGCCTTGAGGGCTTCAGACTTCCTCAAAAGATCCT
JMFF017J04+ TCTGGGTGTCTAGGGTTTGCAGCTTGGCCTTGAGGGCTTCAGACTTCCTCAAAAGATCCT
JMFF022I09+ TCTGGGTGTCTAGGGTTTGCAGCTTGGCCTTGAGGGCTTCAGACTTCCTCAAAAGATCCT
JMFF030L01+ TCTGGGTGTCTAGGGTTTGCAGCTTGGCCTTGAGGGCTTCAGACTTCCTCAAAAGATCCT
JMSF022A21+ TCTGGGTGTCTAGGGTTTGCAGCTTGGCCTTGAGGGCTTCAGACTTCCTCAAAAGATCCT
____________________________________________________________
consensus TCTGGGTGTCTAGGGTTTGCAGCTTGGCCTTGAGGGCTTCAGACTTCCTCAAAAGATCCT
. : . : . : . : . : . :
JMFS077F08+ GTTCCAGAGAAGTGAAATGATCAGAAAGCTCCTTCCAGAGGAGAGTGCAGCTGGTCATCA
JMFF051B04+ GTTCCAGAGAAGTGAAATGATCAGAAAGCTCCTTCCAGAGGAGAGTGCAGCTGGTCATCA
JMFS042C05+ GTTCCAGAGAAGTGAAATGATCAGAAAGCTCCTTCCAGAGGAGAGTGCAGCTGGTCATCA
JMSF053G03+ GTTCCAGAGAAGTGAAATGATCAGAAAGCTCCTTCCAGAGGAGAGTGCAGCTGGTCATCA
JMFF019G08+ GTTCCAGAGAAGTGAAATGATCAGAAAGCTCCTTCCAGAGGAGAGTGCAGCTGGTCATCA
JMFF017J04+ GTTCCAGAGAAGTGAAATGATCAGAAAGCTCCTTCCAGAGGAGAGTGCAGCTGGTCATCA
JMFF022I09+ GTTCCAGAGAAGTGAAATGATCAGAAAGCTCCTTCCAGAGGAGAGTGCAGCTGGTCATCA
JMFF030L01+ GTTCCAGAGAAGTGAAATGATCAGAAAGCTCCTTCCAGAGGAGAGTGCAGCTGGTCATCA
JMSF022A21+ GTTCCAGAGAAGTGAAATGATCAGAAAGCTCCTTCCAGAGGAGAGTGCAGCTGGTCATCA
____________________________________________________________
consensus GTTCCAGAGAAGTGAAATGATCAGAAAGCTCCTTCCAGAGGAGAGTGCAGCTGGTCATCA
. : . : . : . : . : . :
JMFS077F08+ GAGAAGTCTGGCGCTGGAACTCGTCGAAGCTCGTCGGCGGCGGCGCCGGCGGCGCCGACG
JMFF051B04+ GAGAAGTCTGGCGCTGGAACTCGTCGAAGCTCGTCGGCGGCGGCGCCGGCGGCGCCGACG
JMFS042C05+ GAGAAGTCTGGCGCTGGAACTCGTCGAAGCTCGTCGGCGGCGGCGCCGGCGGCGCCGACG
JMSF053G03+ GAGAAGTCTGGCGCTGGAACTCGTCGAAGCTCGTCGGCGGCGGCGCCGGCGGCGCCGACG
JMFF019G08+ GAGAAGTCTGGCGCTGGAACTCGTCGAAGCTCGTCGGCGGCGGCGCCGGCGGCGCCGACG
JMFF017J04+ GAGAAGTCTGGCGCTGGAACTCGTCGAAGCTCGTCGGCGGCGGCGCCGGCGGCGCCGACG
JMFF022I09+ GAGAAGTCTGGCGCTGGAACTCGTCGAAGCTCGTCGGCGGCGGCGCCGGCGGCGCCGACG
JMFF030L01+ GAGAAGTCTGGCGCTGGAACTCGTCGAAGCTCGTCGGCGGCGGCGCCGGCGGCGCCGACG
JMSF022A21+ GAGAAGTCTGGCGCTGGAACTCGTCGAAGCTCGTCGGCGGCGGCGCCGGCGGCGCCGACG
____________________________________________________________
consensus GAGAAGTCTGGCGCTGGAACTCGTCGAAGCTCGTCGGCGGCGGCGCCGGCGGCGCCGACG
. : . : . : . : . : . :
JMFS077F08+ CCTGAGTCACCTCGCCGGGATCGGCGATCGAACCCATTTTCGGAGTTTTAGAGAGAGAAA
JMFF051B04+ CCTGAGTCACCTCGCCGGGATCGGCGATCGAACCCATTTTCGGAGTTTTAGAGAGAGAAA
JMFS042C05+ CCTGAGTCACCTCGCCGGGATCGGCGATCGAACCCATTTTCGGAGTTTTAGAGAGAGAAA
JMSF053G03+ CCTGAGTCACCTCGCCGGGATCGGCGATCGAACCCATTTTCGGAGTTTTAGAGAGAGAAA
JMFF019G08+ CCTGAGTCACCTCGCCGGGATCGGCGATCGAACCCATTTTCGGAGTTTTAGAGAGAGAAA
JMFF017J04+ CCTGAGTCACCTCGCCGGGATCGGCGATCGAACCCATTTTCGGAGTTTTAGAGAGAGAAA
JMFF022I09+ CCTGAGTCACCTCGCCGGGATCGGCGATCGAACCCATTTTCGGAGTTTTAGAGAGAGAAA
JMFF030L01+ CCTGAGTCACCTCGCCGGGATCGGCGATCGAACCCATTTTCGGAGTTTTAGAGAGAGAAA
JMSF022A21+ CCTGAGTCACCTCGCCGGGATCGGCGATCGAACCCATTTTCGGAGTTTTAGAGAGAGAAA
____________________________________________________________
consensus CCTGAGTCACCTCGCCGGGATCGGCGATCGAACCCATTTTCGGAGTTTTAGAGAGAGAAA
. : . : . : . : . : . :
JMFS077F08+ GAG
JMFF051B04+ GAGGA
JMFS042C05+ GAGGAAACCCTA
JMSF053G03+ GAGGAAACCCTAGAAATGAAAGAAGGGAGAAAAAGATTATGTTGAGAGAAAGGAGGTGTC
JMFF019G08+ GAGGAAACCCTAGAAATG
JMFF017J04+ GAGGAAACCCTAGAAATGAAAGAAGGGAGAAAAAGATT
JMFF022I09+ GAGGAAACCCTAGAAATGAAAGAAGGGAGAAAAAGATT
JMFF030L01+ GAGGAAACCCTAGAAATGAAAGAAGGGAGAAAAAGATT
JMSF022A21+ GAGGAAACCCTAGAAATGAAAGAAGGGAGAAAAAGATTATGTTGAGAGAAAGGAGGTGTC
____________________________________________________________
consensus GAGGAAACCCTAGAAATGAAAGAAGGGAGAAAAAGATTATGTTGAGAGAAAGGAGGTGTC