Contig 000718:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS038D02Sequence627000718 (3)emb|CAA75777.1|3e-98transketolase 1 [Capsicum annuum]
JMFS047E09Sequence627000718 (3)emb|CDO97702.1|4e-97unnamed protein product [Coffea canephora]
JMSF020E18Sequence683000718 (3)emb|CDO97702.1|6e-110unnamed protein product [Coffea canephora]775000369 (13)ref|XP_011090550.1|2e-79PREDICTED: transketolase, chloroplastic [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF020E18+ TCGAGCAGCCAAATGTTTCTCAG
                      ____________________________________________________________
consensus TCGAGCAGCCAAATGTTTCTCAG
 
. : . : . : . : . : . :
JMFS038D02+ CCAAACCAACAGCATTCGCAATACCTTGGCCAAGAGGACCAGTGGTAACTTCAA
JMFS047E09+ GCAATACC-TGGCCAAGAGGACCAGTGGTAACTTCAA
JMSF020E18+ CAAGTGCCAAACCAACAGCATTCGCAATACCTTGGCCAAGAGGACCAGTGGTAACTTCAA
                      ____________________________________________________________
consensus CAAGTGCCAAACCAACAGCATTCGCAATACCTTGGCCAAGAGGACCAGTGGTAACTTCAA
 
. : . : . : . : . : . :
JMFS038D02+ CACCAGGGGTTTCAAAGTTCTCAGGGTGACCAGGGGTCCTGCTTCCCCACTGACGGAAAT
JMFS047E09+ CACCAGGGGTTTCAAAGTTCTCAGGGTGACCAGGGGTCCTGCTTCCCCACTGACGGAAAT
JMSF020E18+ CACCAGGGGTTTCAAAGTTCTCAGGGTGACCAGGGGTCCTGCTTCCCCACTGACGGAAAT
                      ____________________________________________________________
consensus CACCAGGGGTTTCAAAGTTCTCAGGGTGACCAGGGGTCCTGCTTCCCCACTGACGGAAAT
 
. : . : . : . : . : . :
JMFS038D02+ TCTTCAAATCATCTTCCCTGACAGCATCGTAGCCAGCAAGGTGAAGCAGGGCGTACTGGA
JMFS047E09+ TCTTCAAATCATCTTCCCTGACAGCATCGTAGCCAGCAAGGTGAAGCAGGGCGTACTGGA
JMSF020E18+ TCTTCAAATCATCTTCCCTGACAGCATCGTAGCCAGCAAGGTGAAGCAGGGCGTACTGGA
                      ____________________________________________________________
consensus TCTTCAAATCATCTTCCCTGACAGCATCGTAGCCAGCAAGGTGAAGCAGGGCGTACTGGA
 
. : . : . : . : . : . :
JMFS038D02+ GCATACATCCATGGCCAGCGGAGAGAACGAAGCGGTCACGGTTAAACCAGTAGGGGTTCT
JMFS047E09+ GCATACATCCATGGCCAGCGGAGAGAACGAAGCGGTCACGGTTAAACCAGTAGGGGTTCT
JMSF020E18+ GCATACATCCATGGCCAGCGGAGAGAACGAAGCGGTCACGGTTAAACCAGTAGGGGTTCT
                      ____________________________________________________________
consensus GCATACATCCATGGCCAGCGGAGAGAACGAAGCGGTCACGGTTAAACCAGTAGGGGTTCT
 
. : . : . : . : . : . :
JMFS038D02+ TGGGGTTGTACCTCATGACCTCATCGTACAAGATGTGACCCATGGGAGCACAGCCCATGG
JMFS047E09+ TGGGGTTGTACCTCATGACCTCATCGTACAAGATGTGACCCATGGGAGCACAGCCCATGG
JMSF020E18+ TGGGGTTGTACCTCATGACCTCATCGTACAAGATGTGACCCATGGGAGCACAGCCCATGG
                      ____________________________________________________________
consensus TGGGGTTGTACCTCATGACCTCATCGTACAAGATGTGACCCATGGGAGCACAGCCCATGG
 
. : . : . : . : . : . :
JMFS038D02+ GGAGACCCGGGTGGCCGGAGTTGGCCTTCTCGACGGCGTCGATAGAGAGGAATCTGATCG
JMFS047E09+ GGAGACCCGGGTGGCCGGAGTTGGCCTTCTCGACGGCGTCGATAGAGAGGAATCTGATCG
JMSF020E18+ GGAGACCCGGGTGGCCGGAGTTGGCCCTCTCGACGGCGTCGATAGAGAGGAATCTGATCG
                      ____________________________________________________________
consensus GGAGACCCGGGTGGCCGGAGTTGGCCTTCTCGACGGCGTCGATAGAGAGGAATCTGATCG
 
. : . : . : . : . : . :
JMFS038D02+ TGTTCACTGATTTCTCAACGAGGGAAGTGTCAGTCTTCTCCAAAGTCTCGATAGTAGCGG
JMFS047E09+ TGTTCACTGATTTCTCAACGAGGGAAGTGTCAGTCTTCTCCAAAGTCTCGATAGTAGCGG
JMSF020E18+ TGTTCACTGATTTCTCAACGAGGGAAGTGTCAGTCTTCTCCAAAGTCTCGATAGTAGCGG
                      ____________________________________________________________
consensus TGTTCACTGATTTCTCAACGAGGGAAGTGTCAGTCTTCTCCAAAGTCTCGATAGTAGCGG
 
. : . : . : . : . : . :
JMFS038D02+ ACGCCCGCACAGGTGAGGAGCGGTGGGGGGCAGGAACGGCGGCGCGGCGGCGGGCGGAGG
JMFS047E09+ ACGCCCGCACAGGTGAGGAGCGGTGGGGGGCAGGAACGGCGGCGCGGCGGCGGGCGGAGG
JMSF020E18+ ACGCCCGCACAGGTGAGGAGCGGTGGGGGGCAGGAACGGCGGCGCGGCGGCGGGCGGAGG
                      ____________________________________________________________
consensus ACGCCCGCACAGGTGAGGAGCGGTGGGGGGCAGGAACGGCGGCGCGGCGGCGGGCGGAGG
 
. : . : . : . : . : . :
JMFS038D02+ CCGTGGCCTTGAGGCCGCTGAAAGTGGGGAAAGAAAGGGAGGGGGTGTGGAGCTGAGGGG
JMFS047E09+ CCGTGGCCTTGAGGCCGCTGAAAGTGGGGAAAGAAAGGGAGGGGGTGTGGAGCTGAGGGG
JMSF020E18+ CCGTGGCCTTGAGGCCGCTGAAAGTGGGGAAAGAAAGGGAGGGGGTGTGGAGCTGAGGGG
                      ____________________________________________________________
consensus CCGTGGCCTTGAGGCCGCTGAAAGTGGGGAAAGAAAGGGAGGGGGTGTGGAGCTGAGGGG
 
. : . : . : . : . : . :
JMFS038D02+ CGGCGGAGGTTGAGCCATGGCGGGGGATGGAGCGGGAGAGGATGGCTT-AGAGAGAGTGA
JMFS047E09+ CGGCGGAGGTTGAGCCATGGCGGGGGATGGAGCGGGAGAGGATGGCTTGAGAGAGAGTGA
JMSF020E18+ CGGCGGAGGTTGAGCCATGGCGGGGGATGGAGCGGGAGAGGATGGCTTGAGAGAGAGTGA
                      ____________________________________________________________
consensus CGGCGGAGGTTGAGCCATGGCGGGGGATGGAGCGGGAGAGGATGGCTTGAGAGAGAGTGA
 
. : . : . : . : . : . :
JMFS038D02+ CAGAAGAAGTTGAAGCCATGGCTGAG
JMFS047E09+ CAGAAGAAGTTGAAGCCATGGCTGAG
JMSF020E18+ CAGAAGAAGTTGAAGCCATGGCTGAGGGGTTAGAGAGAGAGAGTGTGTGTGTGGTGGTCC
                      ____________________________________________________________
consensus CAGAAGAAGTTGAAGCCATGGCTGAGGGGTTAGAGAGAGAGAGTGTGTGTGTGGTGGTCC