| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF014O10 | Sequence | 572 | 000711 (8) | ref|XP_009802381.1| | 2e-73 | PREDICTED: phosphatidylinositol 3-kinase, root isoform [Nicotiana sylvestris] | 778 | 008398 (7) | gb|AAL86326.1| | 5e-96 | putative phosphatidylinositol 3-kinase [Arabidopsis thaliana] |
| JMFF029H11 | Sequence | 579 | 000711 (8) | ref|XP_009605436.1| | 2e-68 | PREDICTED: phosphatidylinositol 3-kinase, root isoform [Nicotiana tomentosiform | 762 | 008398 (7) | ref|XP_009802381.1| | 3e-91 | PREDICTED: phosphatidylinositol 3-kinase, root isoform [Nicotiana sylvestris] |
| JMFS003F09 | Sequence | 578 | 000711 (8) | ref|XP_009802381.1| | 2e-73 | PREDICTED: phosphatidylinositol 3-kinase, root isoform [Nicotiana sylvestris] | |||||
| JMFS007G08 | Sequence | 611 | 000711 (8) | ref|XP_009802381.1| | 3e-82 | PREDICTED: phosphatidylinositol 3-kinase, root isoform [Nicotiana sylvestris] | |||||
| JMFS042H04 | Sequence | 641 | 000711 (8) | ref|XP_009802381.1| | 1e-79 | PREDICTED: phosphatidylinositol 3-kinase, root isoform [Nicotiana sylvestris] | |||||
| JMSF001G14 | Sequence | 410 | 000711 (8) | ref|XP_009802381.1| | 1e-24 | PREDICTED: phosphatidylinositol 3-kinase, root isoform [Nicotiana sylvestris] | 619 | 008398 (7) | dbj|BAD94035.1| | 2e-78 | phosphatidylinositol 3-kinase [Arabidopsis thaliana] |
| JMSF018M13 | Sequence | 240 | 000711 (8) | ref|XP_002267769.2| | 7e-05 | PREDICTED: phosphatidylinositol 3-kinase, root isoform isoform X1 [Vitis vinife | 744 | 008398 (7) | gb|AAL86326.1| | 3e-96 | putative phosphatidylinositol 3-kinase [Arabidopsis thaliana] |
| JMSF045G21 | Sequence | 719 | 000711 (8) | ref|XP_009802381.1| | 2e-85 | PREDICTED: phosphatidylinositol 3-kinase, root isoform [Nicotiana sylvestris] | 771 | 008398 (7) | ref|XP_004236633.1| | 4e-97 | PREDICTED: phosphatidylinositol 3-kinase, root isoform [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
JMFS003F09+ TTGCCAGACCAAAGTCTAAG
JMFF014O10+ TTTGCCAGACCAAAGTCTAAG
____________________________________________________________
consensus TTTGCCAGACCAAAGTCTAAG
. : . : . : . : . : . :
JMFS003F09+ CTTATGCTTCCCTGTTTTCAGTTGCTTTTTCATGTTAAAAAGATGTATGGTAGCCCCACC
JMFF014O10+ CTTATGCTTCCCTGTTTTCAGTTGCTTTTTCATGTTAAAAAGATGTATGGTAGCCCCACC
JMFF029H11+ CTTATGCTTCCCTGTTTTCAGTTGCTTTTTCATGTTAAAAAGATGTATGGTAGCCCCACC
____________________________________________________________
consensus CTTATGCTTCCCTGTTTTCAGTTGCTTTTTCATGTTAAAAAGATGTATGGTAGCCCCACC
. : . : . : . : . : . :
JMFS003F09+ AATTACTCCCTCGCTCTTTCCACATGAAACATCCCAAACAGTAAGTGCAAGCTGTGAATT
JMFF014O10+ AATTACTCCCTCGCTCTTTCCACATGAAACATCCCAAACAGTAAGTGCAAGCTGTGAATT
JMFF029H11+ AATTACTCCCTCGCTCTTTCCACATGAAACATCCCAAACAGTAAGTGCAAGCTGTGAATT
JMFS042H04+ TTTCCACATGAAACATCCCAAACAGTAAGTGCAAGCTGTGAATT
JMFS007G08+ TTTCCACATGAAACATCCCAAACAGTAAGTGCAAGCTGTGAATT
JMSF045G21+ TTTCCACATGAAACATCCCAAACAGTAAGTGCAAGCTGTGAATT
____________________________________________________________
consensus AATTACTCCCTCGCTCTTTCCACATGAAACATCCCAAACAGTAAGTGCAAGCTGTGAATT
. : . : . : . : . : . :
JMFS003F09+ TGCAGTTAGGTCTCTATACTTTGTACTCAATGTGATAAGCTCATTCCAGCAGTAAGATGG
JMFF014O10+ TGCAGTTAGGTCTCTATACTTTGTACTCAATGTGATAAGCTCATTCCAGCAGTAAGATGG
JMFF029H11+ TGCAGTTAGGTCTCTATACTTTGTACTCAATGTGATAAGCTCATTCCAGCAGTAAGATGG
JMFS042H04+ TGCAGTTAGGTCTCTATACTTTGTACTCAATGTGATAAGCTCATTCCAGCAGTAAGATGG
JMFS007G08+ TGCAGTTAGGTCTCTATACTTTGTACTCAATGTGATAAGCTCATTCCAGCAGTAAGATGG
JMSF045G21+ TGCAGTTAGGTCTCTATACTTTGTACTCAATGTGATAAGCTCATTCCAGCAGTAAGATGG
____________________________________________________________
consensus TGCAGTTAGGTCTCTATACTTTGTACTCAATGTGATAAGCTCATTCCAGCAGTAAGATGG
. : . : . : . : . : . :
JMFS003F09+ ACCTCTTGATTCCAGCCTAGTTCTCATGGGAAGTCCAAAGGGAGCGCCATCGATGTACAA
JMFF014O10+ ACCTCTTGATTCCAGCCTAGTTCTCATGGGAAGTCCAAAGGGAGCGCCATCGATGTACAA
JMFF029H11+ ACCTCTTGATTCCAGCCTAGTCCTCATGGGAAGTCCAAAGGGAGCGCCATCGATGTACAA
JMFS042H04+ ACCTCTTGATTCCAGCCTAGTTCTCATGGGAAGTCCAAAGGGAGCGCCATCGATGTACAA
JMFS007G08+ ACCTCTTGATTCCAGCCTAGTTCTCATGGGAAGTCCAAAGGGAGCGCCATCGATGTACAA
JMSF001G14+ TTCCAGCCTAGTTCTCATGGGAAGTCCAAAGGGAGCGCCATCGATGTACAA
JMSF045G21+ ACCTCTTGATTCCAGCCTAGTTCTCATGGGAAGTCCAAAGGGAGCGCCATCGATGTACAA
____________________________________________________________
consensus ACCTCTTGATTCCAGCCTAGTTCTCATGGGAAGTCCAAAGGGAGCGCCATCGATGTACAA
. : . : . : . : . : . :
JMFS003F09+ TGTGCTCTCTACATACAACTCGGGCTTCCTATCGTCGATTGCATTCATCATAGTATCAAC
JMFF014O10+ TGTGCTCTCTACATACAACTCGGGCTTCCTATCGTCGATTGCATTCATCATAGTATCAAC
JMFF029H11+ TGTGCTCTCTACATACAACTCGGGCTTCCTATCGTCGATTGCATTCATCATAGTATCAAC
JMFS042H04+ TGTGCTCTCTACATACAACTCGGGCTTCCTATCGTCGATTGCATTCATCATAGTATCAAC
JMFS007G08+ TGTGCTCTCTACATACAACTCGGGCTTCCTATCGTCGATTGCATTCATCATAGTATCAAC
JMSF001G14+ TGTGCTCTCTACATACAACTCGGGCTTCCTATCGTCGATTGCATTCATCATAGTATCAAC
JMSF045G21+ TGTGCTCTCTACATACAACTCGGGCTTCCTATCGTCGATTGCATTCATCATAGTATCAAC
____________________________________________________________
consensus TGTGCTCTCTACATACAACTCGGGCTTCCTATCGTCGATTGCATTCATCATAGTATCAAC
. : . : . : . : . : . :
JMFS003F09+ ACCATCTGAGCCGGGGAGCTTAGGTGGAGGCAATTTTCCTTCGAGACGTTCAATCCGGAA
JMFF014O10+ ACCATCTGAGCCGGGGAGCTTAGGTGGAGGCAATTTTCCTTCGAGACGTTCAATCCGGAA
JMFF029H11+ ACCATCTGAGCCGGGGAGCTTAGGTGGAGGCAATTTTCCTTCGAGACGTTCAATCCGGAA
JMFS042H04+ ACCATCTGAGCCGGGGAGCTTAGGTGGAGGCAATTTTCCTTCGAGACGTTCAATCCGGAA
JMFS007G08+ ACCATCTGAGCCGGGGAGCTTAGGTGGAGGCAATTTTCCTTCGAGACGTTCAATCCGGAA
JMSF001G14+ ACCATCTGAGCCGGGGAGCTTAGGTGGAGGCAATTTTCCTTCGAGACGTTCAATCCGGAA
JMSF045G21+ ACCATCTGAGCCGGGGAGCTTAGGTGGAGGCAATTTTCCTTCGAGACGTTCAATCCGGAA
____________________________________________________________
consensus ACCATCTGAGCCGGGGAGCTTAGGTGGAGGCAATTTTCCTTCGAGACGTTCAATCCGGAA
. : . : . : . : . : . :
JMFS003F09+ CGTGACCGGAAGATTGATGTCGCATGATAGGAAGAACCTGAACTCGTTTCCACTCATTGT
JMFF014O10+ CGTGACCGGAAGATTGATGTCGCATGATAGGAAGAACCTGAACTCGTTTCCACTCATTGT
JMFF029H11+ CGTGACCGGAAGATTGATGTCGCATGATAGGAAGAACCTGAACTCGTTTCCACTCATTGT
JMFS042H04+ CGTGACCGGAAGATTGATGTCGCATGATAGGAAGAACCTGAACTCGTTTCCACTCATTGT
JMFS007G08+ CGTGACCGGAAGATTGATGTCGCATGATAGGAAGAACCTGAACTCGTTTCCACTCATTGT
JMSF001G14+ CGTGACCGGAAGATTGATGTCGCATGATAGGAAGAACCTGAACTCGTTTCCACTCATTGT
JMSF045G21+ CGTGACCGGAAGATTGATGTCGCATGATAGGAAGAACCTGAACTCGTTTCCACTCATTGT
JMSF018M13+ CGTGACCGGAAGATTGATGTCGCATGATAGGAAGAACCTGAACTCGTTTCCACTCATTGT
____________________________________________________________
consensus CGTGACCGGAAGATTGATGTCGCATGATAGGAAGAACCTGAACTCGTTTCCACTCATTGT
. : . : . : . : . : . :
JMFS003F09+ TTTCATTACAATTTGATTAGGGTTCAGACTTTAGAAGCTGAGGTTTTCATGGTTTTGTAT
JMFF014O10+ TTTCATTACAATTTGATTAGGGTTCAGACTTTAGAAGCTGAGGTTTTCATGGTTTTGTAT
JMFF029H11+ TTTCATTACAATTTGATTAGGGTTCAGACTTTAGAAGCTGAGGTTTTCATGGTTTTGTAT
JMFS042H04+ TTTCATTACAATTTGATTAGGGTTCAGACTTTAGAAGCTGAGGTTTTCATGGTTTTGTAT
JMFS007G08+ TTTCATTACAATTTGATTAGGGTTCAGACTTTAGAAGCTGAGGTTTTCATGGTTTTGTAT
JMSF001G14+ TTTCATTACAATTTGATTAGGGTTCAGACTTTAGAAGCTGAGGTTTTCATGGTTTTGTAT
JMSF045G21+ TTTCATTACAATTTGATTAGGGTTCAGACTTTAGAAGCTGAGGTTTTCATGGTTTTGTAT
JMSF018M13+ TTTCATTACAATTTGATTAGGGTTCAGACTTTAGAAGCTGAGGTTTTCATGGTTTTGTAT
____________________________________________________________
consensus TTTCATTACAATTTGATTAGGGTTCAGACTTTAGAAGCTGAGGTTTTCATGGTTTTGTAT
. : . : . : . : . : . :
JMFS003F09+ GCATTACCGTGAAAATCGACGATTTAAAGTATAATTGGGTTTC-AAATAAACCCTCTGAC
JMFF014O10+ GCATTACCGTGAAAATCGACGATTTAAAGTATAATTGGGTTTC-AAATAAACCCTCTGAC
JMFF029H11+ GCATTACCGTGAAAATCGACGATTTAAAGTATAATTGGGTTTC-AAATAAACCCTCTGAC
JMFS042H04+ GCATTACCGTGAAAATCGACGATTTAAAGTATAATTGGGTTTC-AAATAAACCCTCTGAC
JMFS007G08+ GCATTACCGTGAAAATCGACGATTTAAAGTATAATTGGGTTTC-AAATAAACCCTCTGAC
JMSF001G14+ GCATTACCGTGAAAATCGACGATTTAAAGTATAATTGGGTTTC-AAATAAACCCTCTGAC
JMSF045G21+ GCATTACCGTGAAAATCGACGATTTAAAGTATAATTGGGTTTC-AAATAAACCCTCTGAC
JMSF018M13+ GCATTACCGTGAAAATCGACGATTTAAAGTATAATTGGGTTTCAAAATAAACCCTCTGAC
____________________________________________________________
consensus GCATTACCGTGAAAATCGACGATTTAAAGTATAATTGGGTTTC-AAATAAACCCTCTGAC
. : . : . : . : . : . :
JMFS003F09+ GTCGGAAACTC
JMFF014O10+ GTCGGAAACTCT
JMFF029H11+ GTCGGAAACTCTGTCGTACGTCGGGTCGGAGAGAGCTGAT
JMFS042H04+ GTCGGAAACTCTGTCGTACGTCGGGTCGGAGAGAGCTGATAAAACTTTC
JMFS007G08+ GTCGGAAACTC
JMSF001G14+ GTCGGAAACTCTGTCGTACGTCGGGTCGGAGAGAGCTGATAAAAATTTCAGTTCACGGCC
JMSF045G21+ GTCGGAAACTCTGTCGTACGTCGGGTCGGAGAGAGCTGATAAAAATTTCAGTTCACGGCC
JMSF018M13+ GTCGGAAACTCTGTCGTACGTCGGGTCGGAGAGAGCTGATAAAACTTTCAGTTCACGGCC
____________________________________________________________
consensus GTCGGAAACTCTGTCGTACGTCGGGTCGGAGAGAGCTGATAAAACTTTCAGTTCACGGCC