| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF026F04 | Sequence | 567 | 000698 (4) | ref|XP_009771569.1| | 2e-102 | PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Nicotiana sylvestris] | 757 | 006866 (3) | ref|XP_009799129.1| | 4e-114 | PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Nicotiana sylvestris] |
| JMSF017E24 | Sequence | 461 | 000698 (4) | ref|XP_009771569.1| | 3e-63 | PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Nicotiana sylvestris] | 723 | 006866 (3) | ref|XP_009799129.1| | 4e-111 | PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Nicotiana sylvestris] |
| JMSF022N06 | Sequence | 636 | 000698 (4) | ref|XP_009771569.1| | 2e-102 | PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Nicotiana sylvestris] | 686 | 006866 (3) | ref|XP_009590467.1| | 2e-104 | PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Nicotiana tomentosiformis] |
| JMSF027O17 | Sequence | 635 | 000698 (4) | ref|XP_009771569.1| | 2e-102 | PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Nicotiana sylvestris] | 628 | 002113 (5) | ref|XP_009596104.1| | 1e-95 | PREDICTED: uncharacterized protein ycf23-like [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMFF026F04+ TAAAGCCCAGCTAACATGGTCTTGAATGTAAACT
____________________________________________________________
consensus TAAAGCCCAGCTAACATGGTCTTGAATGTAAACT
. : . : . : . : . : . :
JMFF026F04+ ATAAATGTCACCCCAACTAAGATCCCAGAGCAAAGCCCAAAGTTCCACCAATTGAAAAAT
____________________________________________________________
consensus ATAAATGTCACCCCAACTAAGATCCCAGAGCAAAGCCCAAAGTTCCACCAATTGAAAAAT
. : . : . : . : . : . :
JMFF026F04+ GACATCTTCTGCTTTCTTTCCTCTGGGTGATCATCATCAAACTGATCAGCTCCAAAGCTC
JMSF027O17+ GGTGATCATCATCAAACTGATCAGCTCCAAAGCTC
JMSF022N06+ GGTGATCATCATCAAACTGATCAGCTCCAAAGCTC
____________________________________________________________
consensus GACATCTTCTGCTTTCTTTCCTCTGGGTGATCATCATCAAACTGATCAGCTCCAAAGCTC
. : . : . : . : . : . :
JMFF026F04+ TCCAGGGAGGGCTTGTGGCCTCCCGTCCCGATCGATATCATGTAAATCGCGAGGAAAAAT
JMSF027O17+ TCCAGGGAGGGCTTGTGGCCTCCCGTCCCGATCGATATCATGTAAATCGCGAGGAAAAAT
JMSF022N06+ TCCAGGGAGGGCTTGTGGCCTCCCGTCCCGATCGATATCATGTAAATCGCGAGGAAAAAT
____________________________________________________________
consensus TCCAGGGAGGGCTTGTGGCCTCCCGTCCCGATCGATATCATGTAAATCGCGAGGAAAAAT
. : . : . : . : . : . :
JMFF026F04+ ATAGCTTCGTGCGCCTTCCGAGGTTCATCGCACACTTCATTCCCGCAGGGTCTCAAGCTA
JMSF027O17+ ATAGCTTCGTGCGCCTTCCGAGGTTCATCGCACACTTCATTCCCGCAGGGTCTCAAGCTA
JMSF022N06+ ATAGCTTCGTGCGCCTTCCGAGGTTCATCGCACACTTCATTCCCGCAGGGTCTCAAGCTA
____________________________________________________________
consensus ATAGCTTCGTGCGCCTTCCGAGGTTCATCGCACACTTCATTCCCGCAGGGTCTCAAGCTA
. : . : . : . : . : . :
JMFF026F04+ GGGACTACCCTCGACATTGTCAACAGAATCAAGCCCAAGAAGTAGAGAACGGATGAAGTA
JMSF027O17+ GGGACTACCCTCGACATTGTCAACAGAATCAAGCCCAAGAAGTAGAGAACGGATGAAGTA
JMSF022N06+ GGGACTACCCTCGACATTGTCAACAGAATCAAGCCCAAGAAGTAGAGAACGGATGAAGTA
JMSF017E24+ TCAACAGAATCAAGCCCAAGAAGTAGAGAACGGATGAAGTA
____________________________________________________________
consensus GGGACTACCCTCGACATTGTCAACAGAATCAAGCCCAAGAAGTAGAGAACGGATGAAGTA
. : . : . : . : . : . :
JMFF026F04+ AGAACGGTGGAGAATCGACCCAAGTAAGCATCGGCTAAGAAACCACCAAAGAGAGGCATA
JMSF027O17+ AGAACGGTGGAGAATCGACCCAAGTAAGCATCGGCTAAGAAACCACCAAAGAGAGGCATA
JMSF022N06+ AGAACGGTGGAGAATCGACCCAAGTAAGCATCGGCTAAGAAACCACCAAAGAGAGGCATA
JMSF017E24+ AGAACGGTGGAGAATCGACCCAAGTAAGCATCGGCTAAGAAACCACCAAAGAGAGGCATA
____________________________________________________________
consensus AGAACGGTGGAGAATCGACCCAAGTAAGCATCGGCTAAGAAACCACCAAAGAGAGGCATA
. : . : . : . : . : . :
JMFF026F04+ AGAGTGGTAACACCAGCCCAGTAGTTGACATTCTTGGCTGCTGTTTTGAGGTCTTCCTGC
JMSF027O17+ AGAGTGGTAACACCAGCCCAGTAGTTGACATTCTTGGCTGCTGTTTTGAGGTCTTCCTGC
JMSF022N06+ AGAGTGGTAACACCAGCCCAGTAGTTGACATTCTTGGCTGCTGTTTTGAGGTCTTCCTGC
JMSF017E24+ AGAGTGGTAACACCAGCCCAGTAGTTGACATTCTTGGCTGCTGTTTTGAGGTCTTCCTGC
____________________________________________________________
consensus AGAGTGGTAACACCAGCCCAGTAGTTGACATTCTTGGCTGCTGTTTTGAGGTCTTCCTGC
. : . : . : . : . : . :
JMFF026F04+ AGAATCTTGGTCAGGTATATAATCAAACTTGTGGCGATTCCGAAATAACTCAACCTCTCA
JMSF027O17+ AGAATCTTGGTCAGGTATATAATCAAACTTGTGGCGATTCCGAAATAACTCAACCTCTCA
JMSF022N06+ AGAATCTTGGTCAGGTATATAATCAAACTTGTGGCGATTCCGAAATAACTCAACCTCTCA
JMSF017E24+ AGAATCTTGGTCAGGTATATAATCAAACTTGTGGCGATTCCGAAATAACTCAACCTCTCA
____________________________________________________________
consensus AGAATCTTGGTCAGGTATATAATCAAACTTGTGGCGATTCCGAAATAACTCAACCTCTCA
. : . : . : . : . : . :
JMFF026F04+ GCAAATTCAATCA
JMSF027O17+ GCAAATTCAATCATGATGATGAAAAGGGAGGACTTCCAGACACCAGTGGAGGCGCGGAGA
JMSF022N06+ GCAAATTCAATCATGATGATGAAAAGGGAGGACTTCCAGACACCAGTGGAGGCGCGGAGA
JMSF017E24+ GCAAATTCAATCATGATGATGAAAAGGGAGGACTTCCAGACACCAGTGGAGGCGCGGAGA
____________________________________________________________
consensus GCAAATTCAATCATGATGATGAAAAGGGAGGACTTCCAGACACCAGTGGAGGCGCGGAGA
. : . : . : . : . : . :
JMSF027O17+ GGAACCCGGCCTTTATGATCAAGAGAAGAATCATACACCCATTTCTGCTCATCCATTTCT
JMSF022N06+ GGAACCCGGCCTTTATGATCAAGAGAAGAATCATACACCCATTTCTGCTCATCCATTTCT
JMSF017E24+ GGAACCCGGCCTTTATGATCAAGAGAAGAATCATACACCCATTTCTGCTCATCCATTTCT
____________________________________________________________
consensus GGAACCCGGCCTTTATGATCAAGAGAAGAATCATACACCCATTTCTGCTCATCCATTTCT
. : . : . : . : . : . :
JMSF027O17+ GCAAATTCCTCTTTATTGATTTGCTCAATCTCCACTCTCCTATCCATCTTGATGAGCTCC
JMSF022N06+ GCAAATTCCTCTTTATTGATTTGCTCAATCTCCACTCTCCTATCCATCTTGATGAGCTCC
JMSF017E24+ GCAAATTCCTCTTTATTGATTTGCTCAATCTCCACTCTCCTATCCATCTTGATGAGCTCC
____________________________________________________________
consensus GCAAATTCCTCTTTATTGATTTGCTCAATCTCCACTCTCCTATCCATCTTGATGAGCTCC
. : . : . : . : . : . :
JMSF027O17+ AATTAATCCCAAAGATGTTATTTGAAGTAATATGTAAATATAGTGTGTTGGTTTAACTTC
JMSF022N06+ AATTAATCCCAAAGATGTTATTTGAAGTAATATGTAAATATAGTGTGTTGGTTTAACTTC
JMSF017E24+ AATTAATCCCAAAGATGTTATTTGAAGTAATATGTAAATATAGTGTGTTGGTTTAACTTC
____________________________________________________________
consensus AATTAATCCCAAAGATGTTATTTGAAGTAATATGTAAATATAGTGTGTTGGTTTAACTTC